Numida meleagris (helmeted guineafowl): 110395599
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Entry
110395599 CDS
T06015
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel00100
Steroid biosynthesis
nmel01100
Metabolic pathways
Module
nmel_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
110395599 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nmel01006
]
110395599 (FDFT1)
Enzymes [BR:
nmel01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
110395599 (FDFT1)
Prenyltransferases [BR:
nmel01006
]
Terpene biosynthesis
Squalene/phytoene synthase
110395599 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
110395599
NCBI-ProteinID:
XP_021245877
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All DBs
Position
3:108414137..108424916
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AA seq
418 aa
AA seq
DB search
MELLKKWLGHPEDIYHLLRFKMGGYRAVMPRMDPESLGLGLRTCYRYLNQTSRSFAAVIQ
ALDGELRHAVCIFYLVLRALDTIEDDMTISLDVKVPMLIEFHSYLYQPEWKYMESKEKHR
QVLEDFPTISMEFRNLAKVYQDVISDICHKMGVGMAEFLEKKVDSQHEWDRYCHYVAGLV
GIGLSRLFSASELEDPIVGQDTELANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRY
TKKLSDLAKPENIDMAVQCLNELITNALRHVPDVLTYLSRLKNQSVFNFCAIPQVMAIAT
LAACYNNKQVFRGVVKIRKGQAVTLMMDATNMQSVKAIMYQYVEEIYQKIPSTDPSSNKT
QQIIASIRAMSLPNGPMASRHHYSPIYLSCAMLLAALSWQYLSTISKAAEEYVQAGEN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgaagaaatggctggggcaccccgaggacatctaccacctgctgcgcttc
aagatgggcggctaccgggccgtcatgccgcgcatggacccggaatcgctgggactcggg
ctccgcacgtgttaccgctacctcaaccagaccagccgcagtttcgccgccgttatccag
gcgctggacggagagctacgacacgccgtctgtatattttacctagttctccgtgccctg
gacaccatagaggatgacatgaccatcagcttagatgtaaaggtcccgatgctgattgag
tttcactcttatctctatcaaccggagtggaaatacatggagagcaaggagaagcaccgg
caggtgctggaggacttcccgacgatctccatggagtttaggaacctggcaaaggtctac
caggatgtgatttctgatatttgtcacaagatgggtgttgggatggcagagttcttggaa
aagaaggtggattctcagcacgagtgggatcggtattgccactacgttgctgggctggtg
gggataggcctttcccggctcttctctgcatcagagctagaagatcctattgtaggacaa
gacacagagctggcaaactccatgggcctcttcctgcaaaaaaccaacatcatacgtgac
tatctagaggaccagctggaaggaagggagttctggcccagagaggtttggagcagatac
acgaagaagctctctgaccttgccaaaccagagaacatagatatggctgtccagtgtctg
aatgagctcatcaccaatgctctccgccacgtccctgatgtcctcacttacctgtctcgc
ctgaaaaaccaaagtgtcttcaacttctgtgctatcccccaggtgatggctattgccact
cttgctgcctgctataacaacaaacaggtgttcagaggggtagtgaagatccggaaggga
caagctgtcactctgatgatggatgccacaaacatgcaatctgtcaaagccatcatgtac
cagtatgtggaagagatctaccagaagatccccagcacggacccttcatccaacaagacg
cagcagatcatcgcctccatccgtgccatgagcctgcccaacggccccatggcctcgcgt
caccactattcccccatctacctgtcgtgtgccatgctcctggctgccctgagctggcag
tacctgagcaccatctccaaggccgctgaagaatacgtccaagcgggtgagaactga
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