Numida meleagris (helmeted guineafowl): 110395656
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Entry
110395656 CDS
T06015
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel04517
IgSF CAM signaling
nmel04520
Adherens junction
nmel04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110395656 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
110395656 (AFDN)
04530 Tight junction
110395656 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_3
PDZ_2
RA_2
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
110395656
NCBI-ProteinID:
XP_021245975
LinkDB
All DBs
Position
3:complement(42318292..42437035)
Genome browser
AA seq
1913 aa
AA seq
DB search
MSGGGSREEERRKLADIINHWNANRLDLFEISAPTEDLEFHGVMRFYFQDKAAGNFATKC
IRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDVDEKPLVVQLNWN
KDDREGRFVLKNENDTIPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKRREKEALR
QASDKDDRLLHGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFR
SSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVIEALEKYGLEKENPKDYCIA
RVILPPGAQHSDDKGAKETILDDDECPLQIFREWPSDKGILVFQLKRRPPDYVPKKSKKI
ADGKPLKGKERVDGSGYGSCLPPEKLPYLVELSPGRRNHFAYYNYHAYEDGSDSRDKPKL
YRLQLSVTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMDGVVTVTPRNIDAETYVEGQRIS
ETTMLQSGMKVQFGSSHVFKFVDPTQDHIIPKRPIDASLMVKGPRHKAGAVQETTFDLEG
DVHSGTALPASKSTSRLDGDRTSSASSTAERGMVKPMIRIEQQQDYRRQESRPQDTHGPE
LILPASIEFRESSEDAFLSAIINYTNSSTVHFKLSPTYVLYMTCRYVLSSQYRPDITPTE
RTHKVIAIVNKMVNMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRI
TVDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENNPQRPKIDDVLHTLTGAMS
LLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTAPDSGLCSHYWGAIVRQQLGHIEAWAE
KQGLELAADCHLSRIVQATTLLTMDKYSHADVPNINSTCFKLNSLQLQALLQNYHCAPDE
PLIPTELIENVVTVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNVPSG
LQEFLDPLCQRGFCRLIPHTRSPGTWTIYFEGADYESHLSHENAELAQPLRKEPEIITVT
LKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQ
ERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMQRVSDRRGSGKPRPKSEGFEL
YNNSTQNGSPESPQLPWTEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKNAYAS
GTTTKITSVSTGNLCTEEQTLPPRPEAYPIPTQTYTREYFTFPASKSQDRMGPAQSQWPN
YEEKPQVQAESNHSINSTMQRVARSQEELRDKVFQPERNRLEVVIRKDIEYIDRKSDNDQ
WMNSSVDSSTSSQEHLNHTSKPVSPGSCLTKSGPGRWKTPAASQPTPVAISQPIRTDLPP
PPPPPPVHYAAEFDEPQMDLPLPPPPPPNQVGAQASSQVAAAERKKREEHQRWYEKEKAR
LEEERERKRREQERKLGQMRSQPLIPPQPVVPPVPLQQVKSEKTSTFQRSQETVIRELQP
QQQPRTIERRDLQYITISKEELSSSDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQDL
QNKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDDEEEDDDVDTMLIMQRLEAERRA
RLQDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERTRREAEEKRRQEEEYYNRLEAE
RRRQHDEAERRLLEPDEPGLYRPPLPREYELPSPTPSSNAPPPPPQRNTSYLKTQVLSPD
TIYTAKFVAYNDDEEEEDSNLAGQDKYSGTRKSYGDFPPATLKPQQPSRQPRPVSDGLFL
SNSFQSSPVNANSTAAKKSQPPPPPNKPSFIHASSSKGINSYTGSSGATVGAHEVYRDPR
DKRSKSQDTDLPGAPENLTFRERQRLFSQGQDVSNKVKASRKLMELENELNTK
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcggcagccgggaggaggagcggcgcaaactcgccgacatcatcaaccac
tggaacgcgaaccggctggacctgttcgagatcagcgcccccaccgaggatttggaattt
catggtgtaatgagattttactttcaagacaaagcagctggaaactttgcaacaaaatgt
atccgtgtctcaagtactgccacaactcaagatgtgatagagactcttgcagagaagttc
cggccagacatgcgcatgttgtcatcccctaaatactcgctctatgaggtgcatgtcagt
ggagaagaaagaagattagatgtggatgagaagcctcttgttgtacaattaaactggaac
aaagatgatcgagagggacgatttgttctcaagaatgaaaatgatacaattcctccaaag
aaggctcaaagtaacggccctgaaaaacaagaaaaagaaggagtaatacagaatttcaaa
cgaactctttcaaaaaaagaaaaaaaagaaaagaagaggcgtgaaaaagaggcattgcga
caagcatcagataaagatgatcgacttcttcatggggatgatattgagaattctcgcctt
gcagctgaagtttacaaagatatgcctgagaccagcttcactcgcacaatatctaatcct
gaggtggttatgaaacgacggcggcagcaaaaactagagaagagaatgcaggaatttcgt
agttctgatggcagaccagactcaggtgggacgctgagaatttatgcggacagtttaaaa
ccaaatataccatacaagacaatcctgttgtcaactacggatactgcagactttgcagtt
attgaagcactggagaaatatggcctagagaaggagaaccccaaggattactgtatcgct
cgtgtcattctgcctcctggtgctcagcactctgatgataaaggtgctaaagaaactatt
ctagatgatgatgagtgtccacttcagatattcagggaatggcccagtgataaaggaata
ctagtctttcagttgaaaaggcggcctcctgattatgtcccaaagaaatccaagaaaata
gctgacggaaagccattaaaggggaaggaaagagttgacgggtctggctacggctcttgc
cttcctcctgagaaactaccatacctggtagaactaagcccagggagaaggaatcacttt
gcctactacaactatcacgcttatgaagatggttctgactccagagataaaccaaagctt
tatcgtctacaattaagtgtcactgaagttggaactgaaaaatttgacgacaattccatt
cagttatttggtccaggaattcagcctcatcattgtgacctcactaatatggatggagtt
gttactgtaaccccaagaaacattgatgcggaaacgtatgtagaaggtcagcgtatttca
gaaaccactatgcttcaaagtggaatgaaggttcagtttggatcatctcacgtgtttaag
tttgtggatcccactcaggaccatattattcctaaaagacctattgatgcaagccttatg
gtcaaaggcccaaggcacaaagctggagctgttcaggaaaccacgtttgatctggaggga
gatgttcacagtggaacagcattaccagcaagcaagagcaccagcaggctcgatggtgac
aggacatcatcagcatccagcacagccgagcgaggaatggtgaagcccatgattagaata
gaacagcagcaagattatcgccgacaggaaagcagacctcaggatacccatggaccagaa
ctgatcctacctgccagtattgaattcagggaaagctctgaagatgccttcttatctgcc
attataaattatacaaatagctcgacagttcattttaaactgtcacccacatatgttttg
tatatgacatgtcggtatgtattgtcaagccagtacagacctgacatcactcctactgag
cgtactcataaagttattgcaatagtcaacaagatggtgaatatgatggaaggagtcata
caggaggtagaccaggttgatcagaaacagaagaatattgctggggcacttgccttttgg
atggcaaatgcatctgaattactgaactttataaagcaggaccgtgatcttagccgaatc
actgtggatgctcaagatgttttggcacacttggttcaaatggcattcaagtatctagtt
cattgtctgcagtcagagcttaataactacatgccagcattccttgatgatccagaggaa
aataatcctcagaggcctaaaatagatgatgtgctgcacacattgactggagctatgtcc
cttttgcgacgatgtagagtgaatgctgcactgactatacagctcttctcccagttgttt
cattttatcaacatgtggctttttaacagattagttacggctccagattcagggttatgt
tcccattattggggagctattgttcgtcagcaattgggtcatattgaagcctgggcagaa
aaacagggtttagaattggctgctgattgccacttaagcagaatagtgcaggcaaccaca
ttactcaccatggacaagtactcacatgctgatgttccaaatattaacagtacttgcttt
aagttgaattctctacagctacaagctttgttgcagaattatcactgtgctccagatgaa
ccacttataccaacagaactgatagagaatgtagtaactgttgcagaaaatacggctgat
gaactcgctcgcagtgatggcagagaagtccaattggaagaggatcctgacttacaactc
ccttttcttttaccagaagatggctattcctgtgatgttgtcagaaatgttccaagtggt
ttgcaagaatttttggatcccctctgccagagaggtttttgtaggttaatacctcataca
cggtcaccaggcacatggacaatatactttgaaggtgcagactatgaaagtcacctgtca
catgagaatgctgagcttgctcagcctttgaggaaagaacctgagattataactgtaaca
ctaaaaaaacaaaatggaatgggcctcagcattgttgctgccaagggtgctggtcaagac
aaacttggaatatatgtcaagtctgttgtgaaaggaggtgctgcagatgtggatggtcgt
ctggccgcaggggatcagctgctcagtgtggatggtcgaagcttggtgggactgtcccag
gaaagggcagcagaacttatgacgaggacaggttctgtagtaacactggaagtagcaaaa
caaggagcaatataccatggtctggcaaccctgctaaatcagccatctccaatgatgcag
agagtttctgaccgccgtggctcaggtaaaccccgaccaaagagtgaaggctttgagctg
tataacaactccacgcagaatggatcacctgagagcccccagctgccatggacggagtac
agtgaaccaaagaagctgccaggagatgacagattaatgaagaacagagccgatcatcgc
tccagtcccaatgtagcaaatcagcctccaagccccgggggaaagaatgcttatgcatct
ggaactaccaccaaaataacctcagtctcgactggaaatctttgtacagaggaacaaact
ctgcctccacgacctgaagcttaccccatcccaacacagacctataccagagaatatttc
acattcccagcttcgaaatcccaggatcgaatgggtccagctcagagtcagtggccaaat
tatgaagagaaaccacaggtccaggcagagagtaatcactcaatcaattctacaatgcag
cgcgtggctcgatcccaggaagaactccgagataaagttttccagccagagaggaatcgt
ttggaagttgttatccggaaggacatagagtacattgatcggaagtcagacaacgatcag
tggatgaattcatctgtggattctagcacatctagccaagagcacctgaaccatacatcc
aaaccagtttcacctggttcttgcttaactaaaagtggacctggccgttggaaaactcca
gcagcaagccagccgactccggtggccatttcccagcccatcagaacagatcttcctcct
ccaccgccacctcctccagtgcattatgcagcggaattcgatgaaccacaaatggatttg
cctctgcctccccctcctccaccaaaccaggtaggagcgcaagcgtcttctcaggtggct
gctgctgagcgtaaaaaacgagaagagcatcagaggtggtatgaaaaggaaaaggcacgt
ttggaagaagaacgagaaaggaaacgccgcgagcaggagagaaaactgggccaaatgcgt
tcgcagccactaattcctccccagcctgtggttcctcctgttccccttcaacaagtgaaa
tcggaaaaaacttcaactttccagaggtctcaagaaacagtcattcgagagttgcagcca
caacagcagcctcggactattgagcggagagatctgcagtacattactatcagcaaagaa
gaattgtcctctagtgacagtctctctccagatccctggaagcgagatgccaaggagaaa
ctggagaagcagcaacagatgcacattgtggacatgctgagtaaagagattcaggatctt
cagaacaagcctgaccgtacagctgaagagaacgaccgcctgcgcaaactcatgctagag
tggcagttccaaaagcgacttcaggaatcaaagcaaaaggatgaagatgatgatgaagaa
gaggacgatgatgtggatactatgcttatcatgcagcgactggaggcagaaagaagagca
aggttacaggatgaagaacgcagacggcagcaacagttggaagaaatgcgcaaacgagaa
gcagaagacagggccaggcaggaagaggaacgccgacagcaagaggaggagcgaaccagg
agagaggcagaagaaaagaggcgacaggaagaggaatattacaatcgcttagaggccgaa
aggcgcaggcagcatgatgaagcagaacgaagattgctggaaccagacgagcctggtctg
tacagacctccacttccacgggaatatgaactcccatccccaaccccttcatctaacgct
cctcctcccccacctcagcgaaacacctcttacctcaaaacacaggtcctctcccctgac
acgatttatactgccaagtttgttgcatacaatgatgatgaggaggaggaggattccaat
ctagcaggtcaggataagtactccggcacaagaaaatcttatggtgactttcctcctgcc
acccttaaaccacagcagccctcccgccagcctcgcccagtttcagatggcctttttctt
tccaactcattccagtcatctccagtcaatgccaacagtactgctgccaaaaaaagccag
cccccacccccaccaaacaaaccgagtttcatccatgccagcagctctaaaggaataaat
tcatacaccggatcttcaggagcaacagttggggcccatgaagtttatcgggatccaaga
gacaaacgatctaaaagtcaagatacagatttacctggagcaccagaaaacttgacgttc
agggaacgccagcgacttttttcacagggtcaagatgtatccaataaagtcaaagcctct
aggaagctaatggaactggaaaatgagttgaacacaaaataa
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integrated database retrieval system