Numida meleagris (helmeted guineafowl): 110395790
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Entry
110395790 CDS
T06015
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nmel03037
]
110395790 (CCDC88A)
Cilium and associated proteins [BR:
nmel03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
110395790 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
APG6_N
HOOK
KASH_CCD
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
110395790
NCBI-ProteinID:
XP_021246317
LinkDB
All DBs
Position
3:complement(26064..106442)
Genome browser
AA seq
2067 aa
AA seq
DB search
MENEVFTPVLKKFTGSPLVTWVRTFGPLAEENGTSLEEYMTLVDGVFLNEVMLQINPKST
NRNVIKRVNNDASLRIQNLSILVKQIKNYYQECLQQLIMMALPNVLIIGRNPFSEPGTKE
IKKILLLLLGCAVQCQKKEEFIERIQHLDFDTRAAVAAHIQEVTHNQENVLDLQWMDVVV
LTQDCVEPLLKNMTLHLKRLIDERDEHLETIVELSEERDSLRLLPQASAAQSPCGSPGMK
RTESKQHLSVELADAKAKIRRLRQEIEEKTEEYLDCKQELEQVETELKRLQQENMNLLSD
ARCARVYRDELDVLREKAIRVDKLESEVTRYKERLRDFEFYRARVEELKEDNQLMLETKT
MLEDQLKGMRCRSDKLHELEKENLQLKAKLHDMETERDMDRRKIEELMEENMALEIAQKQ
SMDESLHLGWELEQINRTTERSEVPQKSLGLEVNELTSSRLLKLEKENQSLLKTVEELQS
TVDSVEGNSLRIMKMEKENQRLNEKIEGLENEIVQEKQSLENKQNLTKDLMKEKAELEKT
LETLRENLERQIKLLEQENERSNQTIASLRQRSQISAEARMKEIEKENKILHESFKENSS
KLNKVEFEIKQVKKEMEHYKEKAERAEELENELHRLEKENELLQKKNTNLKISCEKIEAL
EKENSDLDIENRKLKKTFDSLKNLTFQLESLEKENSQLDEENLELRRRIESLKCTSIKMA
QLELENKELESEKEQLKKSLELMKASFKKSERLEVSYQGLDTENQRLQKALENSNKKIQQ
LESELQDLESENQTLQKNLEELKISSKRLEQLEKENKLLEQETSQLEKDKKQLEKENKRL
RQQAEIKDSTLEENNVKINNLEKENKSLCKEITVYKESCIRLKELEMENKELVKRASIDK
KTLVTLREDLVSEKLKTQQMNNDLEKLSHELEKIGLNKERLLCDEQSSDDRYKLLESKLE
STLKNSLEIKEEKIAALEARLEESTNLNQQLRQELKTVKMNYEALKQRQEEERMVQNPPP
RRGEENQSVNKWEKENQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNN
LQAQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSATENE
KECVLKELEDLKSLYDSLLKDHEKLEHLHERQASEYESLIAKHGSLKSAHKNLEVEHKDL
EDRYNQLLKQKVQLEELEKVLKTEQEKMLQQNEKHEAVAAEYKKLRDENDRLAHTHNQLV
RENEVLQTDHKNLKTLLNNSKLEQTQLEAEFSKLREEYQLLDIKCTKLSNQCELLSQLKG
NMEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIM
DQYKFYEPSPPRRRGNWITLKMRKLMKSKKDGNRERQKSATLTPTRSESSEGFLQLPHQD
SQDSSSVGSNSLEDGQILGTKKSSMVALKRLPFLRNRPKEKDKMKAFYRRSMSMNDLVQS
MVLAGGQWTGSSEHLEGPDDISAGKRRKELGAMAFSTTAINFATVNSSTGFRSKQLLNNK
DAMSFEDVSPQGISDDSSTGSRVHGVQDINCADALAPPVRGISAMCKVPCQICSSRPASL
DSGRTSTSNSNNNASLHEVKAGVVNNQSRPQSHSSGEFSMLHEHDAWSSSSSSPIQYLKG
HTRSSPVLQQRTPETLDRCGKQIKTDSPGSEVVTLQQFLEESNKSTSSEMKSGSEENLLD
EVMRSLSESSELTGKEKLRKASAGCGIVRSLSVKNPVDFSDGRSIKPEQRVRPSLRKTED
AYFTSSPIKFTSGTQGKAKSVKEKIQTSVSQRQSRDCNPYATLPRASSVISTAEGTTRRT
SIHDFLSKDIRQPVSSDPATSTADRSVPATSSEYSAHQLSSNFFHCVPYKVDCVPQSNAT
NTVKPHNLGCNCDVPRTSRMERSNFCEKTFLSTNMFNEKLSISGNENTGSFTVVQPFLSL
NTELVSNISGLPPRSASKADQANLSTFVSVPRSQEQPFANQKSDSRDLRSDLSSDFVPPT
CVNASEAEPLLLVSEDNKTVWYEYGCV
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaagtcttcacccccgttttgaagaagttcacgggcagccctctcgtcaca
tgggttcggacgttcggacccttagctgaagagaatgggaccagcctggaggaatacatg
acgctggtggacggcgtgtttctcaacgaagtcatgctgcagattaatccgaagtctacg
aatcggaatgtaataaaaagagtcaacaatgatgcatccctaaggattcagaatttgtct
attttggtgaagcaaataaaaaattactatcaggagtgtttgcagcagctgatcatgatg
gctttgccaaatgtgttaataatcggcagaaatcctttttctgagccaggtactaaggaa
ataaaaaaaatcctcctgcttctacttggttgtgcagttcagtgtcagaaaaaggaagaa
ttcattgaaagaattcagcatctggattttgacacaagagcagctgtcgcagcccatatt
caagaggtaacccataatcaggaaaacgtgttggatctgcagtggatggatgtcgtcgta
ttgacacaagactgtgttgaacctctcctgaaaaatatgacattacatttgaaaagactt
atagacgaaagagatgagcacttggagactatcgtagaactctcagaagaacgggactct
ctccgtttgctacctcaggcatctgcagcacaatcaccttgtggatctcctggcatgaaa
cgcactgaaagcaaacagcacctgtcagtagagctagcagatgccaaagcaaagataaga
aggcttaggcaggagattgaggaaaagactgaggagtaccttgactgtaaacaagaactt
gaacaggtggaaactgaactaaagaggcttcagcaagagaatatgaatttactctcagac
gcccgttgtgccagagtttatagagatgaattagatgttcttcgtgagaaggcaattcga
gttgacaagcttgaaagtgaagtcacccggtacaaagagaggctgcgtgactttgagttc
tacagagctagagtggaggagttaaaggaagacaaccaactgatgctagaaacaaagaca
atgctggaagatcaattaaaggggatgcggtgccgttctgataaattacatgagttagaa
aaagagaatctgcaattaaaagctaaactacatgatatggagacggagcgtgatatggac
agaaggaagattgaggaacttatggaggaaaacatggctctagaaatagctcagaaacaa
agcatggatgaatcgttgcatcttggctgggaacttgaacagataaacaggactactgaa
cgttctgaagtgccacagaaatcacttggtcttgaagtaaatgagctgacatcaagcaga
ttactgaagttggagaaggaaaaccaaagtttgctgaaaacagtggaagaattacaaagt
acagtggattctgtagaaggcaatagtttaaggattatgaaaatggaaaaagaaaaccaa
agacttaacgaaaagattgaagggctagaaaatgaaattgtccaagagaaacagagtctt
gagaacaaacaaaatctgactaaggatttgatgaaagaaaaagcagaacttgaaaagaca
cttgagacgcttcgagaaaacttagaacgacaaattaaactattagaacaagaaaatgaa
cgctcaaatcaaaccatagcttctttaagacaacgctcacaaatcagtgccgaagcgcga
atgaaggaaattgaaaaggaaaataaaattctgcatgagtcttttaaagaaaacagcagt
aagttaaataaggttgaatttgaaataaaacaagtcaagaaagaaatggagcactataaa
gagaaagcagagagagcagaagaactggagaatgagctgcatcgtctggaaaaggaaaat
gaattattacagaaaaagaatactaacttaaaaatctcatgtgagaagatagaggcctta
gaaaaggagaactcagacctggacatagaaaacagaaagctgaaaaaaacctttgatagt
ctcaaaaacctcacgtttcaactagaatccttagagaaggaaaactcacaacttgatgaa
gaaaatttagaattaagaagaagaattgaatctttgaagtgtacaagcattaaaatggca
cagttagaactagaaaataaggagctggagagcgaaaaggagcagcttaaaaaaagcctt
gaactcatgaaagcgtcgtttaagaaaagcgagcgcttggaagtcagctaccaaggtcta
gacacagaaaaccaaaggctacagaaagcccttgaaaacagcaataagaaaattcagcaa
ttagaaagtgaattacaagatttagagtccgaaaatcaaactctgcaaaaaaacttagaa
gagctgaaaatttctagtaagcgcctggagcaactggagaaagagaataagttgttagaa
caagagacttctcaactggaaaaagataagaaacagctagaaaaagaaaataaaagactt
cgacagcaagccgaaattaaagacagtactttagaagaaaacaatgtaaaaattaacaat
ctagaaaaggaaaataagtctctatgtaaagaaatcactgtttataaggagtcatgcata
cgcctgaaagaactagaaatggaaaataaagaacttgtgaaaagagctagcattgataag
aaaacccttgtcactttacgagaggacttggtgagtgaaaaattgaagacccaacaaatg
aataacgatctagaaaagctttcccatgagcttgaaaaaataggcttgaacaaggagcgc
ctcttgtgtgatgagcagagcagtgacgacaggtacaaacttttggagtcaaaattggaa
tccactcttaagaattctcttgaaataaaagaagaaaaaattgctgctttggaggctcgt
ttagaagaatcaactaatttaaaccagcagctccgccaggaacttaaaacagtgaaaatg
aactatgaagctctcaaacaaaggcaagaagaggaaagaatggttcagaatcctcctcca
agaaggggagaagaaaatcagtctgtcaataagtgggagaaagaaaaccaggaaactact
agagaattactaaaagtcaaagatagattaattgaagtggaaaggaataatgctacactt
caagcagagaagcaagcactgaaaacacaattaaagcagcttgagacacagaataacaat
ctgcaagctcagattcttgcacttcagagacagactgtttctctacaggagcagaataca
actctgcagactcaaaatgccaaacttcaggttgaaaattctacccttaattctcaaagt
acgtctttaatgaatcagaatgcacaactgttgattcagcagtctgctacagaaaatgaa
aaggaatgtgtgctcaaggagcttgaggatctgaagtcattgtacgattcgcttctcaaa
gaccatgagaaactggaacacctacacgaacgccaagcttctgagtatgaatcgctgatt
gctaaacatggaagccttaaatctgcacacaaaaatctggaggtggagcataaggactta
gaagataggtacaatcagttgcttaaacagaaagtgcagttggaagaattggagaaagtg
ctcaaaacagaacaggagaaaatgctgcagcaaaatgaaaaacatgaggctgtagcagca
gagtataagaagcttcgtgatgaaaatgataggcttgctcatacacacaatcaactcgtg
agagagaatgaagttctgcaaactgatcataagaatctgaagacattattgaacaattcc
aaactagaacaaacacaattagaagctgagttctctaaactcagagaagagtaccaactg
ctggatattaaatgtacaaaactaagtaatcagtgtgagctgcttagccagcttaaagga
aatatggaagaggaaaacagacatctactagatcaaattcagacattaatgctacagaat
agaacattacttgagcagaacatggaaagcaaggatctcttccatgtagagcaaaggcag
tacattgacaagctaaatgaactaaggcgacagaaggagaaattggaggagaagataatg
gatcagtataaattttatgagccatctccacctagaagaaggggcaactggattacgctg
aagatgaggaaactgatgaaatccaagaaggatggtaatcgagaacgtcagaagtctgca
acccttacacctacccgttcagaatccagtgaaggatttcttcagctgccccaccaggac
agtcaggatagttcctccgtgggctccaactctcttgaagatggccagatcctgggaacc
aaaaagagtagtatggttgcactgaaaagactgccctttttgaggaacagaccgaaggaa
aaagacaaaatgaaggccttctatcgtcgctccatgtccatgaatgacctggtgcagtcc
atggtcctagcaggaggacaatggacaggtagttctgagcatctggagggtcctgatgat
atatctgcgggtaaaaggagaaaagaattgggagctatggccttctctactacagctatc
aactttgcaactgtcaactcttctacaggcttcagatccaagcagttgctaaataataaa
gatgctatgtcgtttgaagacgtaagtccacaaggtattagtgatgattctagcacagga
tcaagagttcacggagtacaggacattaactgtgcagatgctcttgctcctcctgttcgt
ggcatttcagcaatgtgcaaggttccctgtcagatctgttcttcccgaccagccagcctt
gatagtggcagaacatccactagtaatagcaataacaatgcttcactccatgaagtcaaa
gcaggtgtggttaacaatcaaagcagaccgcagagtcacagcagcggagaattcagtatg
ctgcatgaacacgacgcttggtcaagcagcagcagcagccctattcagtatttgaaaggt
catacaaggtctagtcccgtgcttcagcaaagaacacctgagacactggatcgttgtgga
aaacagatcaaaaccgattctcctggaagtgaagttgttaccctgcagcagttcttagaa
gaaagcaacaaaagtacctcaagcgagatgaaatctggaagtgaagagaatcttttagat
gaagtaatgagaagtttatctgagtcatctgagctgacaggaaaggaaaagctaagaaag
gcatctgctggttgtggaatcgtgaggtcattgagtgtaaaaaatccagttgatttctca
gatggacgatccattaaaccagaacagcgtgtaaggcccagccttcgtaaaacggaagat
gcctattttactagctctccaataaaatttacatcgggcactcaagggaaggccaaatca
gtgaaagaaaagatacaaacatccgtatcacagcgacaatcaagagattgcaatccttac
gctaccttacctcgtgcgagcagtgtgatttctacagcagaaggaactactcgaaggaca
agcattcatgattttttgtctaaggacattaggcaacctgtttctagtgatccagcaaca
tccaccgctgacagaagcgttccagcaacatctagtgagtactcagcacaccagttatcc
tctaatttttttcactgtgtgccttacaaagtagattgtgttccacaaagcaatgcaact
aatacagttaaaccacataatttaggatgcaactgtgacgtgcctaggacttcaaggatg
gaaaggtcaaatttttgtgagaaaactttcttaagcacaaatatgtttaatgagaaactc
agtatatctggcaatgagaacacaggatcttttactgtggtgcagccatttttatccctt
aacactgaattagttagtaatataagtggattgcctccaaggtcggcatcaaaagctgat
caggcaaacctatcaacgtttgtatctgtaccaagaagtcaggagcagccttttgctaat
cagaaatctgatagtagagacctacggtcagatctaagtagtgactttgttcctcccacc
tgtgtgaatgctagcgaggcagagcccctgcttcttgtttctgaagataataaaactgtg
tggtatgagtatggttgtgtatga
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integrated database retrieval system
