Numida meleagris (helmeted guineafowl): 110395978
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Entry
110395978 CDS
T06015
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nmel03016
]
110395978 (TARBP1)
03036 Chromosome and associated proteins [BR:
nmel03036
]
110395978 (TARBP1)
Enzymes [BR:
nmel01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
110395978 (TARBP1)
Transfer RNA biogenesis [BR:
nmel03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110395978 (TARBP1)
Chromosome and associated proteins [BR:
nmel03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110395978 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
110395978
NCBI-ProteinID:
XP_021246794
LinkDB
All DBs
Position
3:38612693..38647205
Genome browser
AA seq
1581 aa
AA seq
DB search
MEVVLADTLLARGGDPGALLRAVCAPLSADRAEALRLLLQRLAAGGERGEAEGEALRRAA
WEVALERCRPLLRLGEGAAGGAERLRLGRAARGALRHCVQLCGAPLAARLARDALAELAD
GGPGAEAAVEALAAAAPRLEEPALVARCAAVALALVREEGEGEAAAALVAGRLLPALGGN
GLALGRVWDGLLGGGPAPRAGRALLALSALADALLPRGPGAALDARLCPRFWRLVQEGLT
ERDGLCRKRARYLLKRAVDLSGGQASCLRCPPDGPDESSLFWWSAEENDKLLQFWETYIL
IVETLEGNQIHVIKPVLPKLNSLYELAISGKEDCWLFHPSWHMCIYKRMFESENKTLTKE
GVLHFLELYETKHLPNSLGFSEFVIGPLMDALSESSLYSRTPSQLMGACPPLGMRLQKFL
ATYVMLLPEEEKGSFLLKFIQKMTNRHWCAVPILFLSMALAYIPACRVLGTDGLHALRDV
LQCTMITHQILLRGAAQCYLLQTAMHLTDVEKVSLPEVASFLLSLRPEESLRRDTMLWME
LCSWLQENDRCFGKSVCSDFEHQEISSLCLYVRSLVGEYLKTPASERENCFMPDWFEAKL
VATMILLAADVEQMRNKSSGKSNIKWIELEAFLNPLLDVLMKLGSNAYIPTLKTDKSLQL
LLKLLQTRSLKCSNTQDDEVLLFIWKSLITPVESVLEFILRRLTTNELSTVGDLDRCDLY
LALIPEIVNLCLQLSSKKLATVKKFISSLTNASIQNFRETNSAEELKLKEQIKKVTSIAS
LTVACEIVDRKPEAHLEDLPSVDALKRFIAFSQFNEVLKKPSYIEEKSGLCEEASSQGWG
KIVARYVRDQWICLHFVLSKLPVLAQEYEEGTSELSLSTIERSREILESALEALTILPSD
QVLPVFDCMKVLVPKLLNSLESLCIEAFDLAWKIISSLSNTQLIFWSNLKAFVRFIFDNE
VLAVAASAKGQAYAKIKEIILKLIDMSTTKTGVFNIVLSHCCQSWILPTFDNRSAARNAF
LNAGNYCELITEGCVFGTVFRRDQRLIQDVHAFIENLGEKCAANVVTESTNRDDHYVRIC
AIKFLCLLDGSNTLHKSFMENIVIKLLEKDELVSRSRTRYYANSLQHRIKNRAWQMLLVL
FPKLDQNFLCGILDKVFQAGFGNNQASVKYFIEWIIILSLHKYPQFLNKFWDCFCYDEEK
LKTSICTFLSVLSHFDTILQNTSEKKPVLKKALLVVLQWCFNHNFSVRLYALVALKKIWG
MCRMLHVGECEALTPVIESSLQQVENMHSTGNARRNWQRIQEHFFFATFHPLEDYNLETI
FYTLPRLSEVAEDEWISLCKFERFTDIPLPPAFQWYRSRTELLDLKPSDWSQQDTGSSSA
DADGQTEWTDVQKKIIPWKNSTPSLDLEMVLQDRAAKLGKSNSRLIVVASLIDKPTNLGG
LCRTSEIFGASALVVGSLHYVQDKQFQHLSVSAEQWLPLVEVKPSQLVDYLQQKKTEGYT
AIGVEQTAKSFDLTEYCFPEKSLLLLGNEHEGIPANLIHHLDVCVEIPQQGIIRSLNVHV
SGALLIWEYTRQQVIKHKQQK
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtgctggcggacacgctgctcgcccgcggcggagatcccggcgcgctgttg
cgggccgtgtgcgcgccgctctccgccgatcgcgcggaggcgctgcgcctcctgctccag
cgcctggccgccggcggggagcggggcgaggcggaaggcgaggcgctgcggcgggcggcc
tgggaggtggcgctggagcggtgccggccgctgctgcgcctcggggagggggcggcgggc
ggcgcggagcggctgcggctgggccgggcggcgcggggcgcgctgcggcactgcgtgcag
ctctgcggggcgccgctggccgcccgcctggcccgcgacgcgctggccgagctcgcggac
ggcgggccgggcgcggaggctgcggtggaggcgctggcggcggcggcgccgcggctggag
gagccggcgctggtggcgcggtgcgcggcggtcgcgctggcgctggtgcgggaggagggc
gaaggcgaggcggcggccgcgctcgtggccgggcggctgctgccggcgctgggcggcaac
gggctggcgctgggccgagtgtgggacgggctgctgggcggcgggccggcgccgcgggcc
gggcgggcgctgctggcgctgagcgcgctggccgacgcgctgctgccgcggggcccggga
gcggcgctggacgcgcggctgtgcccccgcttctggcggctggtgcaggaggggctgacc
gagcgggacgggctgtgccggaagagggcccgctacctgctgaagcgcgccgtggacctc
agcggcggccaggcctcctgcctgcgctgccctccggacggcccagacgagtcaagtctg
ttttggtggtctgctgaagagaatgacaaactcctgcagttctgggaaacttacattttg
atcgtggaaactttggaaggaaaccagatccatgtcataaagccagtattaccaaaacta
aacagtttatatgaacttgctatttcaggaaaagaagattgttggttgtttcacccatca
tggcacatgtgcatctataaaagaatgtttgagagtgagaataaaacactgacaaaggaa
ggagttcttcattttttggagctttatgaaacaaagcatcttccaaattcgcttggtttt
tcagagtttgttattggacccttaatggatgccctctcagaaagttccctttatagtaga
accccaagtcagttaatgggagcctgtcctcctttgggaatgagactgcagaaatttttg
gctacctatgtgatgcttcttccagaagaagaaaaaggcagtttcctgttaaagtttatt
cagaagatgacaaatcggcattggtgtgctgttcccatcttgtttctttctatggctctg
gcatacatccctgcatgtagagtactggggactgatggacttcatgctttaagagatgtc
ctacagtgtaccatgattacacatcagattttgttgcgtggagctgctcagtgctatctt
cttcaaacggcaatgcatttgacagatgtggagaaagtgtctcttccagaggttgccagc
tttcttttgtcccttagaccagaggagtccctaaggagagatactatgttatggatggag
ctttgcagttggctgcaagagaatgacagatgctttggaaagtctgtatgctctgatttt
gagcatcaggagatatcatcactatgtctgtatgtgcgcagtcttgtgggagagtacctt
aagacacccgcatctgaaagagaaaattgctttatgcctgactggtttgaagctaagctt
gttgcaacaatgattctgttggctgctgacgtggaacagatgaggaataaatccagtgga
aaaagcaacataaaatggattgaactagaggctttcttgaaccctcttctggatgtcttg
atgaaacttggcagtaatgcttacataccaacactgaaaacagataaaagcctacagctt
ctcttgaagttattgcagacccgttcgttaaaatgttccaatacacaagatgatgaggtg
ttgctttttatctggaaatctctaattacacctgtggagagtgttcttgaatttatactc
cggcggcttactacaaatgagttaagtacggttggtgacctggatcgttgtgatctatac
ttagccttaattccagagattgtgaatttgtgcttgcaactcagctcaaaaaagttagca
actgtcaagaagttcatctcatccctgactaacgcctctattcaaaattttcgggagaca
aattctgcagaggagctgaagcttaaagaacaaattaaaaaagtaactagcatagcctca
ctcacggtagcttgtgagatagtggatcggaaacctgaagcacaccttgaagatctgcct
tctgtggatgctctaaagagatttattgccttttcccaatttaacgaagtattaaagaaa
ccatcttacattgaagaaaaaagtggcttatgtgaggaagcatcatctcagggatgggga
aaaattgttgcacgctatgtacgtgaccagtggatctgcctgcattttgttttaagtaaa
cttccagtgttggctcaagagtatgaagaaggaacttcagaactgtcactgtcaactatt
gaaaggtcaagagaaattctagagtctgcattggaagccctaactattcttccttcagac
caagttttacctgtgtttgactgcatgaaagtccttgttcccaagcttctgaactcactg
gagtctctctgcatagaagcattcgatttggcttggaaaatcatatcctctttgagcaat
acacagctaatattttggtccaatctgaaagcttttgttcggttcatctttgataacgag
gttctagctgttgctgcaagtgcaaagggccaagcgtatgccaagataaaagagataata
ctcaagctcatagatatgtccactacaaaaactggagtcttcaacatagtccttagtcat
tgttgtcaatcatggatacttcccacttttgataacagaagtgctgcgagaaacgctttc
ttaaatgctgggaattactgtgaacttatcactgagggttgtgtctttggaactgtattt
aggagagatcaaagacttattcaggatgtgcatgccttcatagaaaatcttggagaaaaa
tgtgcagcaaatgttgttactgagagtacaaaccgagatgatcactacgtacggatttgt
gctattaaatttctgtgcttgttggatggatcaaataccttgcataagagctttatggaa
aacatcgtcatcaaactacttgagaaagatgaactggtgtccagatctagaacacgctat
tatgctaactcattacagcatagaattaaaaaccgggcatggcagatgctcttagttctt
tttccgaagctggatcagaatttcttgtgtggaatccttgacaaagtctttcaggctgga
tttggtaacaatcaagcatctgtgaagtacttcattgaatggattattatcttgagtcta
cataaatacccccagtttctcaataaattctgggactgcttttgctatgatgaagaaaag
cttaaaacaagcatctgtacatttttatcagtgttatcacattttgacaccatccttcaa
aatacctctgaaaagaagccggttctgaagaaagccctcctggtagttctgcagtggtgt
ttcaaccataatttcagcgtccgactttatgcactagttgcacttaaaaaaatctggggt
atgtgcagaatgttgcatgtgggagaatgtgaagccctgacaccagttattgaatcgagc
cttcaacaagtggaaaacatgcatagcacagggaatgctagaagaaactggcagcgaatc
caagagcatttcttctttgcaacatttcatccactcgaggactataatctagagacgata
ttttacactcttccacgcctgtcagaagttgctgaggatgaatggatctcgctctgtaaa
tttgagagattcactgacattcctttgccaccagcgtttcagtggtatcgttctcgaact
gagctgcttgatctaaaaccaagtgactggtctcagcaagacacgggttcaagttcagct
gatgcagacggccaaacagagtggactgatgttcagaaaaagattataccctggaaaaac
agtactcctagtttagacctggaaatggtattacaggaccgtgctgctaagcttggtaaa
tcaaacagcagactgattgtggtggcttcacttattgataaacctaccaatttaggaggt
ttatgtcgtacaagtgaaatatttggggcatctgccctggttgttggcagccttcattat
gtacaggacaagcagttccagcatctgagtgtttctgcagagcagtggctccccctcgtt
gaggtgaaaccttctcagctcgttgattatttacagcagaagaaaacagaaggctacact
gctattggtgtggagcagacagccaaaagctttgatcttacagaatattgctttccagag
aagtcactgttactgctgggaaatgaacacgaaggaatcccagcaaacctgattcaccac
ctggatgtctgtgtggaaattcctcagcagggtattattcggtcactcaatgttcatgta
agtggagctctgctgatctgggaatacacaaggcaacaagtgatcaagcacaaacaacaa
aaataa
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