Numida meleagris (helmeted guineafowl): 110396007 Help Entry 110396007         CDS       T06015                                  Symbol SCAF8 Name (RefSeq) protein SCAF8 isoform X1   KO K13191   RNA-binding protein 16 Organism nmel  Numida meleagris (helmeted guineafowl) Brite KEGG Orthology (KO) [BR:nmel00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:nmel03021]     110396007 (SCAF8)    03041 Spliceosome [BR:nmel03041]     110396007 (SCAF8) Transcription machinery [BR:nmel03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      110396007 (SCAF8) Spliceosome [BR:nmel03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    RNA binding proteins (RBPs)     110396007 (SCAF8) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CID RRM_1 RRM_occluded DUF3525 Motif Other DBs NCBI-GeneID:  110396007 NCBI-ProteinID:  XP_021246895 LinkDB All DBs Position 3:49782309..49944266 Genome browser AA seq 1364 aa AA seqDB search MEAVKAFNSECGDVDILLYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQK CKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRV LNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLPSTTAAMSNNTPGTPVTPVTPANVVQ SLPDPWVSQIANTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSLLQALDAGLVVQ LQALTAQLTAAAAAANTLNPLEQSVSFNKKLMDRFDFGEESEQNEEPKKETPTSQLPLVP ESVNNSLFHQLAEQLQQQNLEHLRQQLLEQQQPQKASPEENQEGNFGSEHSASPSQGSSQ QQFLEAETNVDDSMDIQQQDMDIDEGQDVAEEEIFEQEEKKSAVRSRSRTRSRSRSRSPR KRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTL SVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQKL SSGSYKIGSKIIKIAWALNKGVKTEYKQFWDVDLGVSYIPWEKVKLDDLEGFAEGGMIDQ ETVNTEWETARSSEPAKENTQTTQSTAVDKSTVITTQTEAYTQPVTMLQIPVAPAVPAVS LVPPAFPVTMSVPPPGYSAIPPPPFLRASFNPSQPPPGFMPPPVPPVVPPPVVPPPVVPP VVPTSLVQPPLPITQETMKDVPFTGLVLPVVGTVSSNLATPTLSSGSIFNPLPINKQEPD EKGSHLTDLQISSSENSRAVQSDVSSSSGLVGGAQPPTVSSSSGLTGEGQPPSVSSSSGL AGGVQPLNVSSSSGLGGVQPPTVSSSSGLAGGVQLPTVSSSSSLAGGVQPTSVSSSSGLM AGVQPPNVSSSSGLLAGVHPPNISSSPGLLPGMQPPSVSSSSGVLAGVQPQSVSNNSGLL LMPPPNVSSSSGLMGVPPPNISSNSGLLAMQHPAGIQNMPHLNISSQRMPGMPLIDIRPG LMPHSPGPRFPLMQPGIPPQRSIPPPAILDPSLHPPPRGPFPPGDIFNQTERPFATPGRQ NIDSISNPEKRLPLGGDNIQQEGDRDYRFPPVENRDNLNRPSQVDVRDSVGRPPVDPREG IGRPPVDGREHFARPHIDMRENFGRPGIDNLGRREHFAFNSDKHWGQRGDYDEREHHAFP VYGGPKGFHEDRERFRHVNYRFDSRSGPSWNRGFEQDAHRDFDDRRRPWERQRDRDDRDF NFCREINGNRFGRDRMSNNWIPPPHPRVFEYFDGATSQRKADNLPQINGENTDTESQPPT AQVQDDPELYEKLTSSVEINKEKSDTEADIESEPVVESTETEGT NT seq 4095 nt NT seq  +upstreamnt  +downstreamnt atggaggccgtgaaggcctttaacagcgagtgtggtgatgtagatattttgttgtactcg cttaatgattataagccacccatttctaaagctaaaatgacacagatcaccaaggcagca atcaaggctataaagttctacaaacatgttgtgcagagcgttgagaaattcattcaaaag tgcaaaccagaatacaaggtgcctggtctgtatgtcattgactctattgtgagacagtcc cggcatcagtttggacaagagaaggatgtatttgctccaagattcagcaataacatcatc agcactttccagaacttgtatcgttgtcctggggatgacaagagtaaaattgttagagtg ctaaacttatggcagaagaataacgtgttcaaaagtgaaattattcagcctctcttggat atggcagcaggaattcctccaccagttgtgacccctgtcttgcccagcactacagctgct atgagcaacaatacaccaggaacacctgtgactccagttactccagccaatgtggtgcaa agtttacctgatccttgggtatctcagattgctaatacagatacgcttgctgcagtagct cagattttacagagtccccaaggccaacagcttcagcagttgatacagacactgcagata cagcagcagaaacctcagccttcactacttcaagccctggacgctggtcttgttgttcag ttacaggccctaactgcacaacttacagctgcagctgctgctgccaatacacttaatcca ttggaacagagtgtctcttttaataagaagctgatggacaggtttgacttcggggaagaa tctgaacaaaatgaagagcctaaaaaggaaactcccacttcccaactgcctttagtacca gaatccgtgaacaactcactttttcaccaactagctgaacaactgcagcaacaaaattta gaacatctcagacaacagcttctggagcaacagcagcctcaaaaggcaagccctgaggaa aatcaggaaggaaattttggttcagagcactctgcatcaccatcacaagggagcagtcaa cagcagtttttagaagcagaaacaaatgtagatgattcaatggatattcaacaacaggac atggacatagatgaaggacaggatgttgctgaagaagagatatttgaacaagaggaaaag aaatctgctgttcgttcaagatcaagaactcgttcaagatctcgttcaaggtcaccaaga aaacgaaggtctagatcacgatctggttctcgtaagcgtaaacacagaaagcgttcacgc tcaagatcaagagaaaggaagagaaagtcatctcggtcttactccagtgaaagaagggct agggaaagggaaaaagaacgtcagaaaaagggattgcctccaatacggtcaaaaacacta agtgtttgcagcactactctttgggtaggtcaagtagacaagaaggctacacagcaagat ttgactaacttgtttgaagaatttggacaaatagaatctattaatatgattcctccaaga ggttgtgcttatgtctgcatggttcatagacaagatgcatatcgtgctcttcagaagctt agttctgggtcctacaaaattggatctaaaattattaagattgcctgggctttaaataaa ggtgtgaaaacggagtataaacaattctgggatgtagatttgggagtttcatatattcct tgggagaaagtaaaattggatgatttggagggctttgctgaaggtgggatgattgaccag gagacggtaaatacagaatgggaaacagctaggagctcagaacctgctaaagaaaatact caaaccacgcagagtactgcagttgataagagcacagttattacaacgcagacggaagct tacacgcaaccggtcactatgctacagattccagtagctccagctgtgcctgctgttagc ttagttccacctgcgtttcccgtcacaatgtctgtccctcctcctggttatagcgcgatt cctcctccacccttcttgcgagcaagtttcaatccttcacagccacctccaggttttatg cctcccccagttcctcctgttgtcccacctcctgttgtcccaccacctgttgtcccacca gttgttccaacatctttagtacagcctccattgccaattactcaagagacgatgaaggat gtaccttttacaggcctggttctaccagttgttggcacagttagtagcaatctagccact ccaacgttatcttctggaagcatctttaatcctctgccaatcaacaaacaagaacctgat gaaaagggatcacatcttacagaccttcagatttcttccagtgaaaacagtagagctgtg caaagtgatgtctcgagtagctctggacttgttggaggagcccagccacccactgtctca agcagttctgggcttactggagaaggccagccacccagtgtctcaagcagctccggactt gcaggcggagttcagccactcaatgtctcaagcagctctggacttggaggagtacaacca ccaactgtttcaagcagttctggtcttgcaggaggagtgcaactacccactgtctccagt agttcttctcttgcaggaggagttcagccaaccagcgtctcaagcagctctggacttatg gctggagtgcaaccaccaaatgtctcaagtagctcagggcttctagctggagtgcatcca cccaatatatcaagcagccctggccttctaccaggaatgcagcctcccagtgtttcaagc agctcaggagttctggcaggagtacagccacaaagtgtctcaaacaactctggtcttctc ctaatgccgccaccgaatgtttcaagtagttctggacttatgggagtgccaccaccaaat atttcaagtaattctggacttctggcaatgcagcacccagctggcattcaaaatatgcct catttaaatattagtagtcaaaggatgccaggaatgcctctcatagatatccgtccaggc ctaatgccccattcacctggaccaaggtttccattaatgcagccaggaataccgccacag cgtagcattcctcctccagcaatccttgatccatctcttcaccctccgcctcgaggtcct tttcctccaggagatatttttaatcaaacagaaagaccttttgcaacaccaggaagacaa aatattgatagcatttctaatcctgagaaaaggctaccacttggaggcgataacattcag caggagggagacagagattatcgctttcctccagtggaaaacagagataatctcaataga ccatcccaagtggatgtcagagattctgttggacgaccaccagttgatccaagagagggc ataggaagacctccagtagatggaagagaacattttgcaagacctcatatagacatgaga gaaaattttggaagaccaggtatagataatcttggtcgaagagagcattttgctttcaat tcagataagcactggggacagagaggggattatgatgaaagagagcaccatgcctttcct gtttatggtggccctaaaggcttccatgaggacagagagagatttcggcatgtaaactac aggtttgatagtagaagtggtcccagctggaacagaggatttgaacaagatgctcacaga gattttgatgaccgcagaagaccctgggaaagacagagggacagggatgacagagatttt aacttctgcagagaaattaatgggaacaggtttggaagagacagaatgtcgaacaactgg atcccccctccacacccacgggtttttgaatattttgatggggccacttcccaacgcaaa gctgataatttgcctcagataaacggtgaaaatacagacacagaaagtcaaccaccaact gcacaggtgcaggacgatccagaactgtatgaaaaactgacatcttccgtcgagataaac aaagagaagagtgacacagaagctgatatagaaagtgaaccagtggtagaaagcacagaa actgaggggacataa

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