Numida meleagris (helmeted guineafowl): 110396104
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Entry
110396104 CDS
T06015
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110396104 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nmel03041
]
110396104 (CDC40)
Spliceosome [BR:
nmel03041
]
Complex C
Other components
Step II factors
110396104 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
WDR90_beta-prop_4th
WD_LRWD1
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
110396104
NCBI-ProteinID:
XP_021247111
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All DBs
Position
3:complement(66504040..66540536)
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AA seq
580 aa
AA seq
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MSAAIAALASYGGSDSEPDSEPEAEAGPQRAVVLASRDAVLHLRPPPAAPPALPVDAAPE
VAVKEDVETGVHLDPAIKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAH
INDFMFEQQRRTFVTYGYALDPSIDNPEVATKYIGSVEEAEKNQGLTVFETGQKKIEKRK
KFKENDASNIDGFLGPWAKYVDEKEVAKPSEEEQKELDEITAKRQKRGKLEDDKPGEEKT
ILHVKEMYDYQGRSYLHVPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPL
SGHMLLSCSMDCKIKLWEVYGDRRCLRTFIGHGKAVRDICFNNAGTRFLSAAYDRYIKLW
DTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLG
AVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQ
SMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKT
TKLYSRIKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggccatcgccgcgctggcctcctacggcggctccgactcggagcctgactcg
gagcccgaagccgaggccggcccgcagcgcgccgtcgtgctcgccagccgtgacgccgtg
ctccatctccggccgccgcccgcagcgcctccggccttgcccgtggacgcggccccggaa
gtggcggtgaaggaagatgtggaaacaggagtccatcttgatcctgctattaaggaggtt
cagtacaatcccacctatgagaccatgttcgcacctgagtttggaccagaaaacccattt
aggactcagcaaatggctgcacctagaaatatgctctctggatatgcagaaccagctcac
atcaatgatttcatgtttgagcaacaacgaaggacgtttgtaacctatggttatgcatta
gacccatctatagacaaccctgaagttgctaccaagtatattggttctgtagaagaagct
gaaaaaaatcaaggtttaacagtgtttgaaacgggacaaaagaaaattgaaaaaaggaag
aaattcaaggagaatgatgcatctaacattgatggttttctgggaccatgggcaaagtat
gttgatgaaaaagaagtagccaaaccttcagaagaagaacagaaggagttggatgaaata
acagctaagaggcagaagagaggaaaactagaagatgataaacctggagaggagaagact
atattacatgttaaagaaatgtatgactaccaggggagatcttaccttcatgttcctcaa
gatgttggagttaatctccgttctacaatgcctcctgagaaatgctatcttccaaagaaa
caaatccatgtatggtctggacatacaaagggagtcagtgcagttaggttgtttcctctg
tctgggcatatgctgctctcttgctctatggattgcaaaattaagctgtgggaagtatat
ggtgatcgaagatgtctacggacgtttattggacatgggaaagctgtccgagacatctgt
ttcaataacgctggcactcgatttcttagtgctgcatatgaccgctatattaaactgtgg
gacactgaaacaggacaatgtatttcaagattcacaaacaggaaggttccttattgtgtc
aagttcaatcctgatgaagataaacaaaatctctttgttgcaggaatgtcagataagaaa
attgtgcagtgggatattcggagtggtgagattgtgcaggaatatgatagacatttggga
gctgtcaacaccattgtgtttgttgatgaaaacagaagatttgtgagtacatccgatgac
aaaagtttaagagtctgggaatgggacattcccgtagacttcaagtatattgctgagcca
agcatgcattcgatgccagccgtgactttgtctccaaatggaaaatggttggcttgccag
tcgatggataaccaaattctgatttttggagctcagaacagattcagattaaacaaaaag
aaaatcttcaaaggtcacatggtagctggctacgcttgtcaagtggatttctcacctgat
atgagctatgtgatatctggagatgcagatggaaagcttaacatctgggactggaagacc
acaaaactctacagcagaataaaagcacatgataaagtctgcattggcgcagtctggcat
ccacatgaaacatctaaagtcattacgtgtggctgggatggtctcattaagctatgggac
taa
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