Numida meleagris (helmeted guineafowl): 110396244
Help
Entry
110396244 CDS
T06015
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110396244 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmel03400
]
110396244 (MSH6)
DNA repair and recombination proteins [BR:
nmel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110396244 (MSH6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
110396244
NCBI-ProteinID:
XP_021247442
LinkDB
All DBs
Position
3:complement(8723852..8735680)
Genome browser
AA seq
1343 aa
AA seq
DB search
MSRQSTLLRFFPKAQPPQAAAAPPPAGKESRCVSPKERNGREATARPAARSKENGKGNAA
ADAGRGVASVYSPGDLVWAKMEGYPWWPCLIYNHPTEGTIVRGKGSSARIHVQFFDDSPT
RGWVSIKYLRPYKGSSDREVLKGGMFYSTKPEIKKAMELADDAMSKDKSKRLELAVCNEP
SDAEEAEEEEMEQMSGSASGDSDDSNSEEDVKGNKRVPNRGSAVKAKRRRVLDSDSDRDG
SDVEFKPDVKEAASSEEVSSGVDENEATDAETDTESIEESPIKVPSKRKRGNVSKPSKRA
SLENERSEAPKRAAPVSLEAKSKLTSFAAPENFESQANACSGGTNGFAAWEHEKLEWLQE
GKKKDAHRRRQNDPDYDPCTLYVPEDYLNKCTPGMRRWWQLKSQNFDAVICYKVGKFYEL
YHMDAVIGVNELGLIFMKGSWAHSGFPETAFGRFSAILVQKGYKIARVEQTETPEMMEAR
CKATAHPTRFDKVVRREICRILTKGTQTYSIIDCDPSENHNKYLLCVKEKEDSSGQRVYG
VCFVDTSVGKFYVGQFSDDRHCSRFRTLVAHYTPVQVLFEKGNLTADTQKILKGSLVSCI
QEGLISGSQFWNASKTLKVLLEEEYFKENHNSENGCVLPSVIKSLTSESDSLGLTPGENS
ELALSALGGIVFYLKKCLIDQELLSLANFEEYVPVDADSAKTVRPSNFFARTDRRMVLDG
VTLMNLEVLQNGTNGTTEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPASINDRLDAVED
LLAVPHKLTEISEHLKKLPDLERLLSKIHSIGSPLKSQNHPDSRAIFYEEIKYSKKKIAD
FLSALEGFKVMNEIVDAMEEVASGFKSKVLKQLVTRKARDPDGRFPDLSAELKRWDTAFD
HNQARKTGVITPKAGFDSDYDTALQDIKTAEEGFRTYLDKQRKLLGFKSVLYWGTGKNRY
QMEIPETAVSRNLPEEYELKSTRKGYKRYWTKEIEKMLAELVNAEERRDAALKDCMRRLF
YNFDKNSQDWQTAVQCIAVLDVLMSLANYSQDGDGPLCRPVILLPVDSAPPFLELKNARH
PCITKTFFGDDFIPNDIVIGSKDEDGSSEASCVLVTGPNMGGKSTLMRQAGLLVIMAQLG
CYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETSSILQHATEHSLVLVDELGR
GTATFDGTAIASAVVRELAENIKCRTLFSTHYHSLVEDCSGSAAVRLGHMACMVENESED
PSQETITFLYKFIEGACPKSYGFNAARLADIPEEIIQKGHRKAKEFEKKTMSLRIFRFLC
RVVDGVTSDANAVGKLTAMLSHL
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcagagcacgctgctccgcttcttccccaaggcccagccgccgcaggccgcg
gccgctcctccgccggccggcaaggagagccgctgcgtctcccccaaggagcggaacggt
cgcgaggccaccgccaggcccgcggcgcgtagcaaggagaatggcaaagggaacgcggcg
gccgacgcgggccgcggtgtcgccagtgtttattctcctggggacttggtctgggccaag
atggaaggctatccttggtggccgtgcctcatctacaaccaccccacggagggaaccatc
gtcagagggaaagggagctctgctcggatccacgtgcagttctttgatgacagtcccacg
aggggctgggtcagcatcaagtacctgaggccgtacaaaggctcatctgatagagaggtg
ctgaagggaggtatgttctacagtacaaagcctgaaattaaaaaagcaatggagctggca
gatgatgcgatgagcaaagataaaagcaagcgacttgagctggcagtgtgcaacgagcct
tcagatgctgaggaggcagaggaggaggaaatggagcagatgagtggaagtgcgtccggt
gacagtgatgacagcaatagtgaggaagacgtgaagggcaataagcgagtaccgaacagg
ggaagtgctgtaaaagccaaaagaagaagagtgttggactcggacagtgatcgtgacggt
tctgatgtagagttcaagcctgatgtgaaagaagcagcaagcagcgaggaagttagtagt
ggggtggatgaaaatgaagctactgatgcagagacggacacagagagcattgaagaaagt
cccataaaagtcccttctaagcggaagagaggaaacgttagcaagccttctaaaagggct
agcttagaaaatgaacgttctgaagcacccaaaagagcagcgccagtttctctagaagcc
aagtctaagctgacatcgtttgcggcacctgaaaattttgagtctcaagccaacgcttgc
agtggaggtactaatggctttgcagcatgggaacatgaaaagcttgagtggctgcaggaa
gggaaaaagaaagatgcacacaggagacgacagaacgaccctgattatgacccgtgtact
ttgtacgtaccggaggactacctgaacaaatgcacacctggcatgcggaggtggtggcag
ctgaaaagtcaaaactttgatgcggtgatttgctacaaagttgggaaattctatgagttg
tatcacatggatgcggtcatcggcgtgaatgagctgggcctgatatttatgaaaggctcg
tgggctcattccggtttcccagaaactgcctttggcagattctctgctattctggttcag
aagggctacaagatagcccgtgttgagcaaacagaaactcctgaaatgatggaagcgcgc
tgcaaggcaacggcccacccgacgagatttgacaaggttgtacgtcgagaaatctgcaga
atccttaccaaagggactcagacttacagcatcatagattgcgatccgtcggagaaccac
aacaaataccttctgtgtgttaaggaaaaagaagactcctccggacaacgtgtctatggg
gtctgttttgttgacacatcggttgggaaattttacgtgggccagttctcagatgaccgg
cactgctcgaggtttaggactttagtggcgcattacacccctgtgcaggtcctgtttgag
aaggggaacctgaccgcggacactcagaagatactgaaaggctcgctcgtttcttgcatt
caggaagggctgatctctggttcccagttctggaatgcatctaaaacactaaaagttctt
ctcgaggaggagtatttcaaggagaatcacaactctgaaaacgggtgcgttctgccctcg
gtaatcaaatctctgacttcagagagcgactcgctggggttaactcccggcgaaaacagc
gagttagctttgtcagctcttgggggaattgtcttctatctcaagaagtgtctgattgat
caggagctgctgtcgctggcaaacttcgaggagtacgtccctgtggatgctgatagtgca
aaaacggtgaggccaagtaatttctttgccagaactgaccggcgcatggtgctggacgga
gtcaccctgatgaacctggaagtcctgcagaatggaaccaacggaaccacggaaggtacc
ttgttggagaggatcgattcctgttgtacgccctttgggaagcgactcctgaagcagtgg
ctctgcgctccgctttgtaatcctgcgtccattaacgatcgcttagatgccgtcgaggat
cttctggcagtgccgcataaactgactgaaatcagtgagcatctgaagaagcttcctgac
ctcgagaggctgctcagcaaaattcacagtattgggtcaccgcttaaaagtcagaaccat
cctgacagcagggccatcttttatgaagaaatcaaatacagcaaaaaaaaaattgccgac
tttttgtcggcgctggagggattcaaagtaatgaatgaaatcgtcgatgccatggaagaa
gttgccagtggcttcaaatctaaagtccttaagcagctggtcacccgcaaagccagagat
ccagatgggcgcttcccagacttgagcgcggagctgaaaaggtgggatactgcttttgat
cacaaccaggcgcggaagacgggagtgatcactccgaaggctggttttgactccgattat
gatacagcactacaggatattaaaactgccgaggaaggctttcgtacgtatctagataag
caacgcaaactgctcggattcaaatccgtgctgtactgggggacgggcaagaatcgatac
caaatggaaataccggaaaccgcggtatcgcgcaatttacccgaagaatatgagctgaag
tcaaccaggaagggatacaaacggtactggaccaaggagattgagaagatgctggctgag
ttggttaatgctgaggagcggagagatgcagctctaaaggactgcatgaggcgcctgttt
tacaacttcgataagaacagccaggactggcagacagcggtacagtgcatcgccgtgtta
gatgtcttgatgtcccttgctaactacagtcaagatggtgacggaccactgtgccgacct
gtaattctactgcctgtggatagtgctcctcccttcctggaactgaaaaacgcacgccat
ccttgcattacaaaaactttctttggggatgattttattcctaatgacatcgtgataggc
agtaaagatgaagatggcagtagcgaagcttcctgtgtgctagtcactggcccaaatatg
ggtggtaaatcgacactcatgagacaggctggtctcctggttataatggctcagctggga
tgctacgtgcctgctgaggtctgcaggctcactcccatcgacagggtatttacccgactc
ggcgcctcagacagaatcatgtcaggtgaaagtaccttctttgttgaattaagcgagact
tccagcatcctgcagcatgcaacggagcactccctcgttcttgtggacgaactgggtcga
ggcacggctacgtttgacggaacggcgatagcgagcgccgttgttagagagcttgctgag
aacatcaagtgtcgaaccctgttctccacgcattaccactccttggtagaggactgctcg
ggcagcgcggccgtgcggctgggacacatggcttgcatggttgaaaatgagagtgaagat
ccaagccaggaaacgattacgtttctgtataaattcattgaaggagcgtgcccaaaaagc
tatggcttcaatgcagcaagacttgctgacatcccagaggaaattattcagaaggggcac
agaaaagcaaaagagtttgagaaaaagacaatgtcactgagaatattcaggtttctgtgc
cgggtggtggacggtgtgacaagcgacgcgaacgcggttgggaagctcactgccatgctc
agtcacctttaa
DBGET
integrated database retrieval system
