Numida meleagris (helmeted guineafowl): 110396247
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Entry
110396247 CDS
T06015
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110396247 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmel03400
]
110396247 (MSH2)
DNA repair and recombination proteins [BR:
nmel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110396247 (MSH2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
110396247
NCBI-ProteinID:
XP_021247462
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Position
3:complement(8823026..8852889)
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AA seq
942 aa
AA seq
DB search
MAGGGSMAAEVPREAVWPEGAGAEAGFVRAVLSLLEKPDTTVRFFERGDYYSVHGADARL
AARELFRTRAVIRQLAGAPGNQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGSKS
VKENDWYLAYKGSPGNLAQFEEVLFANNDMSMAIGVVGVKLSSADGQRVIGVGYVDTTLR
KLSICEFPDNDQFSNLEALLVQLGPKECVLPGGETAGEMGKLRQVIQRGGILITDRKKAD
FTTKDIVQDLNRLLKSRKGEQMNSAALPEMEKQVAVSSLSAVIKFLELLSDDSNFGQFEL
TTFDLSQYMVLDNAAVQALNLFQSSVENANATQSLAGLLNKCRTPQGQRLVNQWIKQPLM
DKNRIEERLNLVEAFVVDAELRQSLQEDLLRRFPDLNRLAKKFQRQAATLQDCYRMYQAI
NQLPHVVQALEKHEGAHQMLLLAVFITPLNDIHSDFSKFLEMIETTLDMDKVESHEFLVK
ASFDPNLTELREKMNELEENMQSLLKSAAKELGLEAGKSIKLESNSQFGHHFRITCKEEK
VLRNNSKYKITDTQKNGVKFTNSKLSAVNEDYMKSREEYEEAQDAIVKEIINIASGYAEP
IQTMNDVIAQLDAIVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGARHPCIEVQDEVAFI
PNDVTFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCILAR
VGAGDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIA
SKICAFCMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKAGVCDQSFGIHVA
ELAAFPKHVIESAREKALELEEFQDIGRPKDSEGEPAAKKCYREREEGEKIIQDFLCQVK
ALPLTDMAEEDIKTKLKQLRADVLAKNNSFVNEIISRTKVTP
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggcggcagcatggcggccgaggtgccgcgggaagcggtgtggccggagggc
gcgggggccgaggcgggcttcgtgcgcgccgtgctctcgctgctcgagaagcccgacacc
accgtgcgcttcttcgagcgcggcgactactactcggtgcacggcgcggacgcgcggctg
gccgctcgcgagctgttccgtacgcgggccgtcatccggcagctggcgggcgcgccagga
aatcagaaactggagagcgttgtgctcagtaaaatgaacttcgagtcttttgtgagagat
ttgcttctggttcgtcattacagagtggaagtttacaagaataaagcggggagtaaatct
gtcaaagagaatgactggtatttagcatacaagggttctcctggaaatcttgcccagttt
gaggaagttctgtttgccaacaatgatatgtcgatggccatcggggttgtgggggtgaag
ctgtcttctgccgatggacaaagagtaataggagtagggtatgtggacactacgctgaga
aaattgagcatctgtgaattcccggataatgatcagttctcaaaccttgaagccctgctg
gttcagctaggacctaaggagtgcgtgctgccaggaggagagacggcgggagagatggga
aagctgcgacaggtcattcagagagggggaatcctgattacagacagaaagaaggcagat
ttcacgaccaaggatattgttcaggatctcaatcgcttgctaaaatcaagaaaaggagaa
cagatgaatagcgcagcgttgccggagatggaaaagcaggttgctgtttcatctttgtca
gctgttatcaagtttttagagttgctgtcagacgactctaattttggacaatttgaactg
actacttttgatcttagtcagtatatggttctagataatgcagctgtccaagccctgaac
cttttccagagttctgtggaaaatgctaatgctacacagtctctagctggtttactaaat
aaatgcagaacccctcaaggacaaagactagttaatcagtggatcaaacagccacttatg
gacaagaatagaattgaagaaaggttgaatttggttgaagccttcgtggtagacgcagaa
ctgcgtcagagccttcaagaggatcttttacgccgcttcccagatcttaaccggctagca
aagaaatttcagagacaagcagcaaccttacaggactgttaccgaatgtatcaagctatt
aatcaactgcctcatgttgtacaagcgctagaaaaacatgaaggagctcaccagatgttg
ttgctggcagtgtttataacacctcttaatgatatccactctgacttctcaaaatttctg
gagatgatagaaacaacattggatatggataaggtggagagtcatgaatttcttgttaag
gcttcttttgatccaaacctgacagaattacgagagaagatgaacgagctggaagaaaac
atgcagtccttattaaagagtgcagccaaagaacttggtttggaagctggcaaaagtatc
aaactggagtcaaattcacagtttggacatcacttccgaattacttgcaaggaggaaaaa
gttctccggaacaattcaaaatacaagataactgatacgcagaagaatggtgtgaaattt
accaacagcaagctgagcgccgtcaatgaggattacatgaagagtagagaagagtatgaa
gaggctcaggatgcaattgttaaggaaattattaacattgcttcaggttatgcagagcca
attcagaccatgaatgatgtaatagctcagttagatgcaattgtcagttttgctcatgtg
tcaaacggagcaccagtgccgtatgttcgtcctgtcattctggaaaagggacaaggaagg
attgtgctgaaaggtgcccggcacccttgcattgaagtgcaagatgaggtggccttcatc
cccaacgacgtcacatttgagaagggcaagcagatgttccacattattactggccctaac
atgggtggaaagtcaacatatatccgacagacgggagtcattgttcttatggcccaaatt
gggtgttttgtaccgtgcgactctgcggaaataaccattgtggattgtatcctggctcgc
gtaggagctggagacagtcagctgaaaggtgtgtctactttcatggctgaaatgttggaa
actgcttcaatccttaggacagcatctgaaaactctttgataattattgatgagctggga
agaggaacttcgacctacgatggttttggcttggcgtgggctatttccgaatacatcgct
agcaaaatttgtgctttctgtatgtttgccacacattttcatgaactgacagctcttgct
gatcaagttccaacagtaaataacctacatgttactgctctgactagtgacgacacactg
acaatgctgtatcgtgtcaaagcaggtgtttgcgaccagagttttggaatacatgtagca
gagctggcagctttcccaaaacatgtgatagaaagcgcaagagagaaagcactggagctg
gaggagtttcaagacattggcaggcccaaggattctgaaggagagccagcagccaagaaa
tgctacagagaaagagaggaaggcgaaaagatcattcaggattttctctgtcaagtgaaa
gcattgcccctgacagatatggcagaagaagacatcaaaaccaagctgaagcagctgaga
gctgatgtgttggcaaagaacaacagtttcgtgaatgaaatcatttccagaacaaaagtt
acaccatga
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