Numida meleagris (helmeted guineafowl): 110396282
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Entry
110396282 CDS
T06015
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110396282 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nmel04121
]
110396282 (TRIM54)
Ubiquitin system [BR:
nmel04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110396282 (TRIM54)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
CYP38_PsbQ-like
DUF5799
RHH_9
DUF1670
CagA
FlgN
DUF349
Motif
Other DBs
NCBI-GeneID:
110396282
NCBI-ProteinID:
XP_021247532
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Position
3:105467888..105470255
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AA seq
253 aa
AA seq
DB search
MCEEHEDERINIYCLRCEAPTCSLCKVFGAHKDCEVAPLPAVYQRQKSELSDGIAMLVAG
NDRIQAIITQMEEICRTIEENGRRQKQHVGLRFDSLCSILEERKKELLQSVAREQEAKVQ
RVRGLIRQYGDHLEASSKLVETAIQAMEEPQMAVYLQHSKELLKKITDMSKVSMSSRPEP
GYESMDHFSINVDHVAEMLRTIDFQPEALGEDDGDGPTDSSEGVGDEESLEAPEATEEVG
PRQKPLSSPHGQH
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgaggagcacgaggacgagcgcatcaacatctactgcctgcgctgcgaggcgccc
acctgctcgctctgcaaggtgttcggtgcgcacaaggactgcgaggtcgccccgctgccc
gccgtgtaccaacgccagaagagcgagctgagcgatggcatcgccatgctggtggcgggg
aacgaccgcatccaggccatcatcacgcagatggaggagatctgccgcaccatcgaggag
aacggccgccggcagaagcagcacgtggggctgcgcttcgactcgctctgcagcatcctg
gaggagcgcaagaaggagctgctgcagagcgtcgcccgcgagcaggaggcgaaggtgcag
cgcgtgcgcggcctcatccggcagtacggggaccacctggaggcctcctccaagctggtg
gagacggccatccaggccatggaagagccccagatggccgtgtacctgcagcactccaag
gagctcctgaagaagatcacggacatgtccaaggtgtcgatgagcagccgccccgagccc
ggctatgagagcatggaccacttctccatcaacgtggaccacgtggccgagatgctgcgc
accatcgacttccagccagaagcgctgggtgaggacgatggggacggacccacagacagc
agtgagggtgtgggggatgaggagagcctggaggcacctgaggccactgaggaggtgggg
ccgaggcagaagccattgagctctccccatggtcagcactga
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