Numida meleagris (helmeted guineafowl): 110396558
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Entry
110396558 CDS
T06015
Symbol
PPFIBP1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nmel04131
]
110396558 (PPFIBP1)
Membrane trafficking [BR:
nmel04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110396558 (PPFIBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
SAM_PNT
Crescentin
PUMA_CC
DUF7576
Motif
Other DBs
NCBI-GeneID:
110396558
NCBI-ProteinID:
XP_021247935
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All DBs
Position
1:69108297..69209646
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AA seq
1008 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGGLRALHLVEDLRGLLE
MMEADEREGLRCQVPDSTAEALIEWLQSQMTNGHISGNGDVYQERLARLENDKESLVLQV
SVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELLSRTSLETQKLDLMAEISNLK
LKLTSVEKDRLDYEDRFRDTEDLIQEINELRLRVGEMDNERLQYEKKLKTTKDELSALKE
KLEQKEAEVKRLQEKLVCKLKGEGIEILDRDENCKKKLKDKNIEVQKMKKAVESLMAANE
EKDRKIEELRQSLNRYKKVQDMVILAQGKKGKDSDSEDFLNSGSISTVLLDTPSLTDPEK
SPSPTPVTASPIHDEFNTNIHEENSLQIHSSTLQISIPSFSSTSKSSETAAEKVKTQPRP
DPTSDLSEVRSTRSSPETQLCDSPVTSSLQKSSSLSSLKKETSEADRDSAQKPTEQVKPR
MEGNNFATLPPKSPSHGVTGDEDSFGTRKARSSFGRGFFKIKNNKRTASAPNLDRSRSAS
APTLAETEKGSADHLDLAGLPPRPKETESLQMTPPSPDSRKKARGIKKLFGRLKRSQSTT
FNPDDMSETEFKRGGTRATAGPRLGWSRDLGQSRNELDMPFAKWTKEQVCNWLQDQGLGS
YISNGRHWILSGQTLLQASQQDLEKELGIKHPLHRKKLQLALQALGSEEENNHGKLDYHW
VTRWLDDIGLPQYKTQFDEGKVDGRMLHYMSVDDLLSLKVVSVLHHLSIKRAIQVLRINN
FEPNCLRRRPSDENNVIPSEVTQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEPR
FNVETMAQLLNIPPNKTLLRRHLATHFNLLIGPEAQQQKREAMESPDYVLLTATAKVKPK
KLAFSNFGSLRKKKQDDVEEYVCPMELGRASGSASKKGFKAGLDIRVYDDDDLDRLEQME
DSEGTVRQIGAFSEGINNLTHMLKEDEMFKDFATRSPSTSITDEDSNV
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgatgcaagtgacatgcttgctgcggctttggagcagatggatggcataata
gcaggttcgaaggcgctggaatactccaatggcatctttgactgccagtcacccacttcc
cctttcatggggggcctgagagcactacacctggtggaggacctgcggggtttgctggag
atgatggaggcagatgagagagagggtctgcgttgccaggtcccagactcaacagcagag
gctctgattgaatggctccaaagtcaaatgactaatggacacatatctgggaatggagat
gtgtatcaagaaaggctggctcgtctggaaaatgataaggaatctcttgttctgcaagtg
agcgtacttacggaccaggtggaggcccagggagaaaagattcgggatctggagttctgt
ctagaggagcacagggagaagctgaatgccacagaggagatgctgcagcaggagcttttg
agcagaacatcccttgaaactcagaagctggatcttatggcagagatttccaatctgaag
ctaaagcttacatctgtagagaaggatagattggactatgaggacagattcagagataca
gaggatttgatccaggagataaatgaattgcgattaagagtaggagaaatggacaatgaa
agactacagtacgagaaaaagcttaagacaaccaaagatgaactatcagctttgaaagag
aaactggagcagaaggaagctgaggtaaaaaggttgcaagaaaaattggtctgcaagctg
aaaggagaaggcattgaaatactggacagagatgaaaattgtaaaaagaagctcaaagat
aaaaatatagaggtacagaaaatgaagaaggcggtagaatctcttatggctgcaaatgaa
gagaaggatcgaaagatagaagagcttcggcaatctctgaataggtacaagaaagttcaa
gacatggtgatattggctcaaggtaaaaaaggcaaggatagtgacagtgaagatttcttg
aattcaggatctatctccacagttttattggacacaccaagtctgactgacccagaaaaa
agtccatccccaaccccagtaacagcgtctccaatccacgatgaatttaacacgaatatt
catgaagagaattccttacagattcactcaagtactctgcagatttcaatcccatctttt
tcatcaacatccaagagctcagaaactgctgcagagaaagtgaaaacacagcctagacca
gatcctacgagtgatttgagtgaagtaagatcaacacgttcctctccagaaactcaactg
tgtgatagtccagtaacttcctcactgcagaagtccagcagtctgagcagtttgaagaaa
gagacatctgaagcggacagagattctgcgcaaaagccaacagagcaggttaaacctcgc
atggaaggtaataatttcgcaactctccctccaaaatctccttctcatggtgtcacagga
gatgaggatagttttggcacccgtaaagccaggtcttcatttgggcgaggctttttcaag
ataaaaaataacaagaggactgcaagtgcccccaatctagatcgcagtcgaagtgcaagt
gcccctactttagctgaaacagaaaaaggatctgcagatcacctggatttggccggtttg
ccccctcgaccaaaagaaacggagagtttgcagatgactccaccttctccagattccagg
aaaaaggccagaggaatcaagaagttatttggaagacttaaaagaagtcagtctaccacc
ttcaacccagatgacatgtctgaaacggagttcaaaagaggagggacaagagcaacagcg
gggccacggctgggctggtctagagacctggggcagtctcgcaatgagctggacatgcca
tttgcaaagtggacaaaggaacaagtttgcaactggctccaggaccaggggctaggctct
tacataagtaacggcagacactggatactgtctgggcaaactcttctgcaggcctctcag
caggatctggaaaaggagcttgggataaagcacccattgcatcggaagaagcttcagctt
gctctgcaggcacttgggtctgaagaggaaaacaatcatggaaaactggattaccactgg
gttaccaggtggctggatgacattggcctcccccagtataagacccagtttgatgaagga
aaagtggatggccgaatgctccattacatgagtgtggatgacttgctgtccttgaaggtt
gtcagcgtcctccaccacctcagcatcaaaagagccatccaggttctgagaataaataac
tttgagcccaactgtctgcgcaggaggccatcagatgagaataatgtcataccttctgag
gtcacccagtggaccaatcaccgcgtgatggagtggttacgctccgttgatttggcagag
tatgcacctaatctgagggggagcggtgtgcatgggggactgatggttttggagccacgt
ttcaatgtagaaaccatggcccagttgctgaacatcccaccaaacaagacactgctgcga
cggcacctagccactcatttcaacctcctcattgggccggaggcccagcagcagaaacgt
gaagccatggagtccccagactacgtcctcttaacagcaactgccaaagttaagccaaag
aaacttgccttcagcaattttgggagcctgagaaagaagaagcaagatgatgtggaagag
tacgtgtgtcctatggagctggggagggcctctggaagcgcgtcgaagaagggttttaag
gctggcctggatatccgagtatatgatgatgatgatttggacaggctggagcagatggaa
gattcagaagggacagtgaggcaaataggagccttttctgaaggcatcaacaacttgaca
catatgttaaaagaggatgaaatgtttaaagactttgcaactcgctctcctagcaccagt
ataacagatgaagactccaatgtgtga
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