Numida meleagris (helmeted guineafowl): 110397353
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Entry
110397353 CDS
T06015
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nmel04131
]
110397353 (LRBA)
Membrane trafficking [BR:
nmel04131
]
Endosome - Lysosome transport
Others
Others
110397353 (LRBA)
Endosome - Golgi transport
110397353 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
110397353 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
SUKH_6
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
110397353
NCBI-ProteinID:
XP_021249210
LinkDB
All DBs
Position
4:complement(37704065..38081292)
Genome browser
AA seq
2852 aa
AA seq
DB search
MASDGKQVVQPTGDGGGGAGKEGNAAEGGSVLQPLNPGVPIRGIRMKFAVLAGLVEVGEV
SNRDIVDTIFNLLVGGQFDFEMNFIIQEGEGITCMVELLDKCDITCQAEVWSMFTAILKK
SIRNLQACTEVGLVEQVLKRIDRADNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGEK
GRWPPHAGKLLSVLKHLPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMD
PVNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFDFKPQKWY
MVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTNDTFDKCFLGSSETADANRVFCGQ
MTSVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLDEHHKLLLYDGKLSSAIAFM
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSVQSALHSIGGVQVLFPLF
AQLDYRQYSSDHVDTTVCSTLLAFIMELLKNSIAMQEQMLSCKGFLVIGYSLEKSSKAHV
TRAVLELCLAFSKYLSNLHNGVPLLKQLCDHILLNPAIWIHIPAQVQLILYTYLSTEFIG
TVNIYGAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGIDGPRPTQKETLSLRAFLLM
FIKQLVMKDYGIKEEELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPSSMIPAFDQRNG
LQVVYKLLASKSEGIRVQALKVMGYFLKHLAPKRKAEIMLGHGLFSLLAERLMLHTNLIT
MTTYNVLFEILTEQICTQVIHKQHPDPDSTVKIQNPQILKVIAILLRNCPQSPETLEIRR
AFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCCFNPKTSEEQKITEMVYTIFRILLYH
AIKYEWGGWRVWVDTLSITHSKVTFEMHKESLSQMYREYQGKGGEGSGISPSAPIRTISG
VSKEAEIVGKKQCLELKEAATVTSVRDDTESSTEKNESYGDQQTPSVSEQRKDLEEEDKE
TTQDLEAVPCSELSLEPEAIKPSVSEISSGIAEAIEDSLSKAHELVEEAVAVTATSLVME
TALEGETRESPERMEKATVEVEDEGDFVDLKEESSMPLPSEEFAETDKKHSSNENQETKQ
EKAIQQKLESVLLKSKDTGGMDGQNKELALSETVSSAVEEVVNQPNSEGKKKLEEEKVLY
SEPRTAEDTNAHVPEPAGASEKRIARLDVSSVASDTERLELKASTGLEAPLPPRSLSEMS
RQQDCSGQELAATSDGQKRDSRSTVFRIPEFKWSLMHQRLLTDLLFSIETDIQMWRSHST
KTVMDFVNSSDNVIFVHNTIHLISQVMDNMIMACGGILPLLSAATSATHELENIEATQGL
SVEASLTFLQRLINLVDVLIFASSLGFTEIESEKNMSSGGILRQCLRLVCAIAVRNCLEC
QQHAQMKPIGDNAKNQKTIQGFIGAGKSAAKSPVDIVTGGISPIRDLDRLLQDMDINRLR
AVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERRPPNHGQSFKESENENNG
TSAADVENPSAALGTLTSASTEDSECTASVQRRDSGLGEEPTSGQTNSSGGVAEAGALSV
SAGPDAVSEVLCTLSLEVNKTQEDRSESGTEDSKHSASVPAAKNVNVKDILRSLVSTPAD
GTAVDPALLPPAFLGVLGDGAADQPVQFHSFDRSVVVPPKKSNISSTTAAMGIPANAVSV
VSSLDSAQAPDLSGESPGRRSSNSKLPSVPTVSSVPEDSASNMSITDRLEHALEKAAPLL
REIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAG
LAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDINRHAEFESLCAQYSADKREE
EKMCHHLITAAKYRDQVTATQLIQKIVNILTDKHGAWGSSAPSRPREFWRLDYWEDDLRR
RRRFVRNPLGSTHPEATLKAAGEHAPDEDILVKGKQSIKSQALGNQNSESEILLEGDDDI
TSFIEEREVENLTGPVALSAPAQLVAPSVVVKGTLSITLSELYFEVDEEDPSFKKIDPKI
LAYTEGLHGKWLFSEIRAIFSRRYLLQNTALEIFMANRVGVMFNFPDQATVKKVVNCLPR
VGIGATFGLPQTRRISLASPRQIFKASNMTQRWQHREISNFEYLMFLNTIAGRTYNDLNQ
YPIFPWVLTNYESDELDLTLPTNFRDLSKPIGALNPKRAAFFAERYESWEDDQVPKFHYG
THYSTASFALTWLLRIEPFTTLFLNLQGGKFDHADRTFSSISRAWRNSQRDTSDIKELIP
EFYYLPEIFVNSNNYNLGVMDDGTVVSDVELPPWAKTPEEFVRINRLALESEFVSCQLHQ
WIDLIFGYKQQGPEAARSLNVFYYLTYEGAVNLSSITDPVLREAVEAQIRSFGQTPSQLL
IEPHPPRSSAMQVYLLLQSPLMFTDQAQQDVIMVLKFPSNSPVTHVAANTQPGLTNPAVI
TVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGMHRRQITDLLDQSIQVH
SQCFVITSDNRYILVCGFWDKSFRVYSTDSGKLMQVIFGHWDVVTCLARSESYIGGNCYI
LSGSRDATLLLWYWNGKTNIVGDNPRGDFATPRAILTGHDYEITCATICAELGLVISGSK
EGPCLIHSMNGDLLRTLEGPETLEGPENCLRPKLIQASREGQCVIYYENGLFCVFSVNGR
LQATMETDDKIKAIQLSRDGQYLLTGGDNGVVMVWQMWDLKKLFAYPGCDAGIRSMALSY
DQRCILTGMASGSIVVFYNDFNRWHHEYQTRY
NT seq
8559 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgacggcaaacaagttgtgcagccaacaggtgatggtggaggaggagcgggg
aaagaaggaaacgccgccgaagggggaagtgtgctgcagcctctgaatccaggggtcccc
atccgaggcatcaggatgaagtttgccgtgctggcagggctggtggaggttggtgaggtg
tcgaacagagacattgtggacacgatattcaatctgcttgttggaggccaatttgacttc
gaaatgaactttatcatccaagaaggagagggcattacctgcatggtagaactgctggat
aaatgtgacatcacctgtcaggctgaggtgtggagcatgtttacagcaatcttgaaaaaa
agtatacgcaatctacaagcgtgcacagaagtgggactggtagaacaagtgctcaagaga
attgatagagctgacaacatgattgcagatctcttagtggatatgctgggtgtgttggct
agctataacttgacggttcgagagctaaagttattcttcagcaaacttcaaggagaaaaa
gggagatggccacctcacgctgggaaattgttgtctgtgttaaaacacttgcctcagaag
tatggacctgatgccttcttcaactttccaggaaaaagtgctgcagctattgccttacct
cctatagccaagtggccctatcagaatggatttactttccacacttggctaagaatggat
cctgtgaacaatatcaatgtggataaggataagccatatttatattgttttcgaacgaac
aaaggacttggctattctgctcattttgttggcggctgcttgattgtaacatccataaaa
tcaaagggaaaaggctttcagcattgtgtaaaatttgatttcaagccacaaaagtggtat
atggttactattgtgcacatctataaccgctggaagaatagtgaacttcgatgttatgtg
aatggggaactggcatcttatggagaaataacatggtttgtcaacaccaatgatacattt
gacaaatgtttcctgggttcctcagaaacagcagatgccaatcgagtgttttgtgggcaa
atgacatctgtttaccttttcagtgaggctctcaatgctgctcagatctttgccatttat
cagcttggtctgggatataagggaacattcaaattcaaggcagaaagcgatctcttcctt
gatgaacaccacaaattgttgctgtatgatggcaagctatccagtgctattgcttttatg
tacaatccaagggctacagatgcacaactctgtctagagtcatcccctaaagataaccct
tctatttttgttcattcaccacatgccctcatgctgcaggatgtgaaagcagtcttgaca
cattctgtccaaagtgccttgcactccattggaggagtgcaggtacttttccctctcttt
gcacagctagactataggcaatattcatcggaccacgttgacacaactgtttgttctacc
ttgttggcttttattatggagttgttgaagaactcgattgctatgcaagaacaaatgctt
tcttgtaagggcttccttgtgataggatatagcttggaaaagtcttccaaagctcatgtt
acccgagctgtactagagctatgccttgctttttctaagtacctgagcaacttacacaat
ggggtgcccttgctgaaacagctatgcgatcatattctccttaatcctgcaatatggatt
catatcccagcacaggttcagctgatcctgtacacttacttatctactgagttcattggc
actgttaacatctatggtgcaattcggcgggttgggacagttcttttggtcatgcatacc
ctgaagtattattactgggtagtgaatcctcaagatcgcagtggtataactccaaaaggc
atagatgggccacggcctactcaaaaagagactttatctctgcgagcatttttgttgatg
ttcattaaacaactagtgatgaaggactatggaataaaagaagaagaattgcaggcaatc
ctcaattatctactcactattcatgaggatgacaatctgatggatgtcctgcagttgctt
gttgctctcatgtcagagcacccaagttctatgatccctgcttttgatcagaggaatgga
ttacaggtcgtctacaagcttttagcatcaaaaagtgaaggcatcagggtgcaagctctg
aaagtgatgggatatttcttaaagcatcttgctccaaagagaaaagctgaaatcatgctt
ggacatggattattttctttgctggctgaaaggctgatgcttcatacaaacttgatcacc
atgaccacgtacaatgtcttatttgagattctgactgaacagatttgtactcaagtgata
cataaacaacatcctgacccagattcaacagtgaagatacaaaatcctcagattttgaag
gttattgcaatcctactacgtaattgtccacagagtccagaaactttggagattcggcga
gcctttctctcagatatgattaaactttttaataacagcagagaaaataggaggagtttg
ttgcaatgctccgtttggcaggagtggatgctttctctttgctgttttaatcccaagact
tctgaggagcagaagataactgagatggtgtataccatttttcgaatcttgctttaccat
gctatcaaatatgagtggggtggctggcgtgtttgggtggatacgctgtctatcacacat
tcaaaggtaacctttgaaatgcacaaagagagtctttctcaaatgtacagggaataccaa
gggaagggaggtgaagggagtggaataagtccttcagctccaattagaacaatttctgga
gttagcaaagaagctgaaattgtgggaaagaagcaatgtttggaattaaaggaggctgct
actgttacttctgtccgtgatgatacagagtccagtactgaaaaaaatgagtcatatggt
gaccagcaaactccttcagtctctgaacaaaggaaggacttagaggaagaggacaaggaa
actacacaggatctagaagcagtgccttgttcagaactttctctggagccagaagcaata
aaacccagtgtttcagaaattagtagtggaatagctgaagcaattgaagattctctgagc
aaagctcatgagcttgtggaggaagcagttgctgttactgcgacttctttggtaatggaa
actgctttggaaggagaaactcgtgaaagtccagaaagaatggaaaaagcaacagtggaa
gtggaagatgaaggtgacttcgttgatttgaaagaggaaagtagtatgcctttaccttca
gaagagtttgcagaaacagacaaaaagcatagctcgaatgaaaaccaagagacaaagcag
gaaaaagcaatacaacagaaacttgaatctgtgcttttaaaatccaaagatactggaggc
atggatgggcaaaacaaagaactggctttatcagaaacagtcagttctgcagttgaagaa
gtagtgaatcaaccaaattcagaagggaaaaagaagctggaggaagaaaaggtgctttat
agtgaacccagaacagctgaagataccaatgcacatgtaccagagcctgctggagcctct
gaaaaaagaattgccaggcttgatgtttctagtgttgcatcagatacagaaagactggaa
ctgaaagccagcacaggtctagaagcacctctgccccccagatccctatctgagatgtca
aggcagcaagattgttcaggacaagagctagctgctacctcagatgggcagaaaagagac
tctaggtcaactgtgttccgtattcctgagtttaagtggtcactgatgcatcagcgcttg
cttacagacttgctcttttccattgaaacagatatacagatgtggagaagtcattctaca
aaaactgtaatggattttgtgaatagcagtgacaatgtcatatttgtacacaatacaatt
cacctcatctctcaagtgatggacaacatgatcatggcttgtggtggcattttgccactg
ctttctgctgccacatctgctactcatgaattggagaacattgaggcaactcaaggactt
tcggtagaagcttctttaacgtttctccagagattaattaaccttgtagacgtgttaatt
tttgcaagctctcttggtttcactgaaattgagtctgagaaaaacatgtcatctggagga
attctacgacaatgtcttcgtttggtatgcgccatagcagtaagaaattgcttggagtgt
cagcaacatgcacagatgaagccaattggagacaatgcaaagaaccaaaaaacaattcag
ggctttataggagcaggaaagtctgcagcaaagagtccagtggacattgtgactggtgga
atttctccaatacgagaccttgacagacttctgcaggacatggatattaatagacttcga
gcagtagtgttcagagatatagaggatagtaaacaggctcagttcttggccttggcagtt
gtatattttatttctgtactcatggtttcaaaatacagagatattctggaaccccagaat
gaaagaagaccaccaaaccacggtcagtcattcaaggaatcagagaatgaaaataatgga
acttctgctgcagatgtggaaaacccatcagctgctcttggtactttaacttcagcttcc
actgaagattcagaatgtacagcatctgtacaaagaagggactctggtcttggggaggaa
ccaacttcagggcaaacaaacagttcaggtggtgttgctgaagcaggagctctgagtgtc
agtgcaggtccagatgctgtcagtgaagtactttgcactctgtcattagaagtaaataag
actcaggaggacagaagtgagtcaggaacagaggatagcaagcattcagcttctgtgcca
gctgcaaaaaatgttaacgtaaaggacatcctgagaagcttagtaagcacaccagctgat
gggactgcagttgatcctgctcttctgccaccagcctttcttggagttcttggtgatgga
gctgctgaccagcctgtacagttccattcctttgacaggagtgttgtcgtaccaccgaag
aaatcaaacatttcctctactacagctgctatgggtattcctgcaaatgctgtcagtgtg
gtttcttctttagattcggcccaagccccagatttgtcaggagaatctcctggaaggcga
tcatctaattcaaaactgccatctgtccctacagtttcttcagtgcctgaggattctgct
tcaaatatgagtattacagacagacttgaacatgctttggaaaaagctgccccgcttctg
agagagatttttgtggattttgctccctttctttctcgaactcttttgggcagccatggg
caggaattgctgatagaaggtacaagccttgtgtgtatgaaatctagcagttcggttgtg
gagctggtgatgcttctttgctcacaggaatggcagaactctatacaaaagaatgctggc
cttgcctttatagagttggtcaatgaaggacggttgttgagtcagactatgaaggaccat
ttggtcagagtggctaatgaagcagaatttatcttgagcagacagagagcagaggatatt
aaccgacatgctgaatttgagtcactgtgtgcccagtattctgctgacaaacgggaagaa
gaaaaaatgtgccaccatttgataacagcagctaagtaccgagaccaagtgactgcaact
caactaatacagaaaattgtcaacattcttacagacaagcatggagcctggggcagctct
gcgccaagtcgtcctcgtgagttctggcgccttgactactgggaagatgacttgcggcgc
cggcgacgatttgtgcgtaacccccttggatcgacacatcctgaagcgacactaaaagca
gccggagaacatgctcccgatgaagatatacttgttaagggaaagcagtctatcaagagt
caagccttaggaaatcagaactcagaaagtgagattctcttggaaggcgacgacgatatc
acgtcattcattgaggagagagaagtggagaacctaaccggtccggttgccctgagcgca
ccagctcagctggtggcaccctcggtggtggtgaaaggcactctgtccatcactctttcc
gagctctacttcgaggtggatgaagaagatcccagttttaagaaaatcgacccgaagatt
ctggcatatacagaaggactgcatggaaaatggctcttttctgagattcgagccatcttt
tcccgacgttatcttctgcaaaatacagcactggaaatattcatggcaaatagagtgggt
gtcatgttcaactttccggaccaagcaacagtaaagaaagtggttaactgtctgcctcgg
gttggtattggggctacctttggactacctcagaccagacgcatttctttggctagtcca
cgacagattttcaaagcttccaatatgacccagcgatggcaacaccgagaaatttccaac
tttgaataccttatgtttctgaatacaatagcaggtcgcacttacaatgatttaaatcag
taccctatcttcccttgggttcttaccaactatgaatcagatgagttggaccttacgctt
cctaccaacttcagagatttgtcaaagcctattggagctttgaacccaaagagagcagca
ttctttgccgagagatatgaatcatgggaagatgatcaagttccaaagtttcactatggt
acacattattcaactgcaagttttgcactcacatggttattaagaattgaaccctttaca
acacttttcctaaatctacaaggtgggaagttcgatcatgctgatagaaccttttcatct
atttcaagagcatggcgcaacagtcagcgtgacacttctgatatcaaggaattgattcct
gaattctattacctcccagagatatttgtcaacagcaacaattacaatctaggagtgatg
gatgatggaacagttgtgtctgatgttgaacttccaccatgggccaaaaccccagaagaa
tttgttcgcataaacagactggcattagaaagtgagtttgtttcctgccagcttcaccag
tggattgatctgatttttggctacaaacagcaagggccagaggctgccagatccctgaat
gtattctactatttgacgtacgaaggagctgttaatttaagttcaataacagatcctgta
ttgagagaggctgttgaagctcaaatacgaagttttggacagaccccttcccaactgctc
atagaaccacatcctccaagaagttctgccatgcaggtgtatctcctcctgcagagcccg
ttgatgttcacagatcaagctcaacaggatgttatcatggtcctaaagttcccatccaac
tcccctgtcactcatgtagcagccaacacccagcctggtctgaccaatcctgctgtgatc
acagttactgcaaataggctatttgctgtaaataagtggcataatcttcctgctcatcaa
ggtgctgtacaagaccagccttaccagctgccagtggaaatcgatcctctcatagccagc
aatacaggtatgcacagaaggcaaatcactgaccttttagaccaaagcattcaggtacat
tctcagtgttttgtcatcacctctgacaatcgttacatcttggtttgtggcttctgggac
aagagtttccgagtttattctactgattcaggtaaactgatgcaagtaatatttggacac
tgggatgttgtcacctgtcttgctcgttctgaatcctatattggaggaaattgttacatt
ctgtcaggatcacgtgatgcaacattgctgctctggtactggaacggcaagaccaatatt
gttggtgataatccaagaggtgattttgcaactcctcgtgccattctgacaggacatgac
tatgagatcacctgtgctaccatttgtgctgaacttggcttagtaataagtggttcaaaa
gaaggaccatgtctcatacattctatgaatggagatttgctgaggacattagaaggtcct
gaaacattagaaggtcctgaaaattgcctgagaccaaaacttattcaagcttcaagggaa
ggccagtgtgtcatatattatgaaaatggccttttttgtgtattcagtgtgaatgggaga
cttcaagccactatggaaacagatgacaagatcaaggcaatccaactaagcagagatgga
cagtatctgcttacaggtggagacaatggagttgtcatggtatggcagatgtgggacctc
aagaagctttttgcttacccagggtgtgatgctggaatccgatccatggccttgtcatat
gaccaaaggtgtatactgaccggcatggcatcggggagcatagtggttttctacaatgat
ttcaatcgttggcatcatgaatatcaaaccagatactga
DBGET
integrated database retrieval system
