Numida meleagris (helmeted guineafowl): 110397914
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Entry
110397914 CDS
T06015
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel04136
Autophagy - other
nmel04140
Autophagy - animal
nmel04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110397914 (ATG16L1)
04136 Autophagy - other
110397914 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110397914 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nmel04131
]
110397914 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
nmel03029
]
110397914 (ATG16L1)
Membrane trafficking [BR:
nmel04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
110397914 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
110397914 (ATG16L1)
Mitochondrial biogenesis [BR:
nmel03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110397914 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
ATG16
WD40
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
EIF3I
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
eIF2A
Beta-prop_ACSF4
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_VPS8
Beta-prop_WDR41
Tricorn_2nd
ZapB
INO80F
CC_Bre1
PALB2_WD40
Lipoprotein_6
DUF8181
Tricorn_N
V_ATPase_I
HEF_HK
DUF6383
YicC-like_N
WHD_CYT4
HTH_6
CCDC93_CC
Motif
Other DBs
NCBI-GeneID:
110397914
NCBI-ProteinID:
XP_021250634
LinkDB
All DBs
Position
4:23145776..23165832
Genome browser
AA seq
608 aa
AA seq
DB search
MASGLRAAGFPPWKRHIAAELRRRDRLQRQAFEEIVAQYNKLLEKSDLHAVLADKLQAEK
HDMQSRHEISPGHDGTWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQK
DKEMQMNEAKIAEYLQKISELETECQELRSKLQDLERANQTLKDEYDALQITFNALEEKL
RKTTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPRDDD
IEVLADETSDTAEETSPVRAVSRTPSKRLSQPAGGLLDSITNIFGRRSLSSFPAPQDNAE
PHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPK
GSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLD
NARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRTE
SIVKELELLGRITALDLNSERTELLTCSRDDLLKIIDLRVSAVKQTFSAQGFKCGSDWTR
VVFSPDGNYVAAGSADGALYVWNVLTGKLERTLAKHHSSSINAVAWSPAGAHVVSVDKGN
KAVLWSEF
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggggctgcgcgccgccggcttccccccctggaagcggcacatcgcggcggag
ctgcggcggcgggaccggctgcagcggcaggccttcgaggagatcgtcgcgcagtataac
aagctgctagagaagtcggacctccacgcagtgctggctgataagctgcaagcagagaag
catgacatgcagagcagacatgagatcagtccaggacatgatggcacatggaatgatgct
cagttgcaggaactggcacaactgaagataaagcatcaagaggagcttacagagctacat
aagaaacgtggagagttggcgcagtctgtaattgatctgaataaccaaatgcagcagaag
gacaaagagatgcagatgaatgaagcaaagattgcagagtatttgcaaaaaatctctgaa
ctggaaacagagtgccaggaactacgcagcaagctacaagatcttgagcgagctaatcag
acgctgaaagatgaatatgatgctctccagatcaccttcaatgccttggaggagaaactg
aggaaaacaactgaagataaccaggagctggtctcacgttggatggcagagaaagcacag
gaagccaatcgcttgaatgcagaaaatgaaaaggattcgaggaggcgacaagccaggctg
cagaaggagctagcagaagctgccaaagaacccctgcctgttgaacccagggatgatgac
attgaagtgcttgcagatgaaacctctgacacagctgaggagacgtctccagtgcgagct
gtcagccgaacacccagtaagcgactctcccagccagctggaggccttctggactctatc
actaatatctttgggaggcgttctttgtcctcgttccctgctccccaggataatgcagag
ccacatccaggtgccagtaaagaagtgagagtgcccactactgccatatgtgtctttgat
gcacatgacggggaggtgaacgcggtgcagttcagccctggctcccggttactggcgaca
ggaggcatggaccggagggttaagctttgggaagtgttgggagataggtgtgagcccaaa
ggttccctctctggtagtaatgctgggattacaagcatagagtttgatagtgctggttct
tacctcttagcagcttcaaatgactttgccagcaggatctggacggttgatgacaatcga
ttacggcacactttgacaggtcacagtggtaaggttctgtctgccaagttcttgctggac
aacgcacgcattgtttcgggaagtcatgaccggaccctcaagctctgggacctccgcagc
aaagtttgtataaaaacagtgtttgcaggatctagctgcaatgacatcgtatgcactgag
caatgtgtaatgagtggacattttgataagaaaatccgtttctgggatataaggaccgaa
agcatagtaaaagaactggagctgcttgggaggatcacagctctggacttgaactcagag
cgaacagagcttttgacctgttcccgagatgatctactgaagatcattgatctgcgggtt
agtgctgtcaagcaaacattcagtgcccaaggattcaaatgtggctctgactggacaaga
gttgtgttcagtcctgatggtaactatgtggctgctggttcagctgatggtgccctctac
gtttggaatgtactcactgggaagttggagagaactcttgccaagcatcacagttcttct
atcaatgcagtcgcgtggtccccagcgggtgcccatgtggtcagtgtggacaaaggaaac
aaggctgtcctatggtctgagttttga
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