Numida meleagris (helmeted guineafowl): 110398126
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Entry
110398126 CDS
T06015
Symbol
PCDH7
Name
(RefSeq) protocadherin-7
KO
K16498
protocadherin delta 1
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
110398126 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nmel01009
]
110398126 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nmel04515
]
110398126 (PCDH7)
Protein phosphatases and associated proteins [BR:
nmel01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110398126 (PCDH7)
Cell adhesion molecules [BR:
nmel04515
]
Cadherins
Protocadherins
110398126 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
LYRIC
KIAA1549
Fibulin_C
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
110398126
NCBI-ProteinID:
XP_021251183
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Position
4:complement(77945989..78221025)
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AA seq
1279 aa
AA seq
DB search
MSSQRGTDSSQRGTDSSQRGTDSSQRGTDAVAGGAAGPARAREAGAARALPVVRATEPRC
PPAPRPALRPSATPRAARRPTVSVCQAGPHRALGRAGHRNPSVSGPSQSRPAAPKTLTAA
ARPGLLPAAITRETFASREVFASREAFASRETSPHVPLALAPRGFAPPARLRPPAQRCPL
PGSVRLAPGGGGAAASGPESAPYPGGSKRRQEAEARSSVFELQVADTLDGEKQPQLIVKG
ALDREQRDSYELSLRVRDGGEPARSSQAILRVLITDVNDNSPRFEKSVYEADLAENSSPG
TPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDREEVNQLRFT
VMARDRGQPPKTDKATVVLNIRDENDNVPTIDIRKIGRIPLRDGVASVAEDVLVDTPIAL
VQVSDRDQGENGVVTCTVVGDVPFQLKPASEGEGEPQNKRKYFLHTSAPLDYEAVRDYNV
VIVAVDSGSPSLSSNNSLVVRVADTNDNPPVFGQAVLEVSFPENNLPGERVATVVATDAD
SGKNAELTYSLEPSPLSSETPSGIFSIDPDSGDVSVQVVLDREQRDTYEFQVTARDKGVP
SLQGSTTVVVRVADRNDNEPRFMQDVFTFYVKENLQPNSPVGMVTVMDFDKGRNAELSLS
IQPSEHDQAAGIFSIENDTGTIYSTVSFDREQQTSYTFKVKAVDGGEPSRSATATVSLFV
MDENDNAPTVTFPSNSSYTVLPPSSNMRTVVATVVATDADTGLNADLNYSIVGGNPFKLF
EIDPASGVVSLVGKLAPKHYGLHRLVVQVNDSGQPSQSTTALLHVFVNESLSNATVVESQ
VARSLHTPLAQDIAGDPSYELSKQRLSIVIGVVAGIMTVILLILVVVMARYCRSKGKHGY
EAGKKDHEDFFTPQQHDKAKKPKKDKKGKKGKQPLYSSIVTVEASKPNGQRYDSVNEKLS
DSPGIGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVG
AGDNISIGSDHCSEYSCQAGSKYSKQVDTVQTTQHPDHIEESCKMNPFRRVTFSVVSQPQ
DPHQGSLQSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENGA
EKCAPGGLSIVFPDSRPLPDVALTGKCTRECDEYGHSDSCWMPVRTSPERKQKSQPKLST
FMPVDERGSQEKLANGEASLMGDRNRNLLSKKLTSSYETFSAASFSKKEEGNPEDIPLTQ
TGEYKPSPVNTLTRREVYL
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgagctcacagcgcggcaccgacagctcacagcgcggcaccgacagctcacagcgcggc
accgacagctcacagcgcggcaccgacgccgtggctgggggagccgccggcccggcccgg
gcacgcgaagcgggagccgcgcgcgccctccccgtggtacgtgccaccgagcccaggtgc
cccccggctccaagaccggcgctgcgccccagcgccacaccacgggctgcccggcgcccg
actgtgtccgtgtgccaggccggaccccaccgcgctctaggccgggccgggcaccggaac
ccgagcgtctccgggccctcacagagccgccccgcagctcccaagaccctcactgcggcg
gcgcggccgggacttcttcccgccgcaattactcgcgagacctttgcgtctcgcgaggtg
tttgcgtcacgcgaggcgtttgcttctcgcgagacctccccgcacgtccctctcgccctc
gccccgcgcggcttcgctcccccagcccggctccggccccccgcccagcggtgccctctt
ccgggctccgtccgcctcgctccgggcggcggcggtgcggcggcgtccggcccggagagc
gccccctaccccggcggcagcaagcggaggcaggaggcggaggcccgcagcagcgtgttc
gagctgcaggtggcagacaccctggacggggagaagcagccgcagctgatcgtcaagggg
gcgctagaccgcgagcagcgggactcctacgaactgagcctgcgcgtgcgcgacggcggg
gagcccgcgcgttcctcgcaggccatactgcgggtgctgatcaccgacgtgaacgacaac
agtccccgcttcgagaagagcgtctacgaggccgacctggcggagaacagcagccccggg
acccctatcctgcagctgcgagccgctgacctggatgtaggggtgaacgggcagatcgag
tacgtctttggggcagccactgagtcagtgaggcggctgctgaggctggatgagacctcg
ggctggctcagcgtcctgcaccgcatcgaccgcgaggaggttaaccagctgcgcttcact
gtgatggcccgggaccgcgggcagccccctaagacggacaaggccacagtggtactgaac
atccgcgatgagaacgacaacgtgcccaccatagacatccggaagatcgggcgcatccca
ctgcgggacggggtggccagcgtggccgaggacgtactggtggatacccccattgccctg
gtgcaggtatcagaccgggaccaaggtgaaaacggtgtggtgacctgcaccgtggtgggg
gatgtgcccttccagctcaagccggccagtgagggtgaaggggaaccgcagaacaagcgc
aagtacttcctccacacctcagcccctctggactatgaggcggtgcgcgactacaatgtg
gtgatcgtagccgtggactcaggcagccccagcttgtccagcaacaactccttggtggtg
cgggttgcagacactaatgacaaccctcctgtgtttggccaggccgtgctggaggtctct
ttcccagagaacaatctgcccggtgagagggtggccacggtggtggccacagatgcggac
agcggcaagaatgctgagctcacctactccctggagccctcgcccctctcctcggagaca
ccaagtggcatcttcagcattgaccctgactctggggatgtgtctgtgcaggtggtgctg
gaccgtgagcagcgcgacacctatgagttccaggtgacagcccgagacaagggggtgcca
tcactgcagggctccaccacggtggttgtgcgggtggcagatcgcaatgacaacgagcca
cgcttcatgcaggatgtgttcactttctacgtgaaggagaacctgcagcccaacagccct
gtgggcatggtgaccgtcatggactttgacaaagggcgcaatgctgagctcagcctctcc
atacagcccagtgaacatgaccaggcggccggcatcttctctatcgaaaacgacacagga
accatctactccacagtctcatttgaccgggagcagcagaccagctacaccttcaaagtg
aaggcggtggatgggggtgagccgtcacgctcggccactgctaccgtgtccctctttgta
atggatgagaatgacaatgcgcccactgtcaccttccccagcaacagctcctacactgtg
ttgccgccctccagcaacatgcgcactgtagtggccacggtggtggccactgatgctgac
actggcctcaacgctgacctcaactacagcattgttggaggaaaccccttcaagctcttc
gagatcgatccagccagtggcgtggtgtcactggtgggtaagctggcccccaaacactat
ggtctgcaccgcctcgttgtgcaggtgaatgacagtgggcagccatcccagtccaccact
gccttgctccacgtctttgtcaatgagagcttgtccaatgccaccgtggtggagagccag
gtggcccgcagcctccacacacccctggcccaggacatcgctggtgaccctagctatgag
ctgagcaagcagcgcctcagcattgtcattggtgtggtggccggcatcatgactgtcatc
ctgctcatcctggtggtggtcatggcccgctactgccgctccaagggcaagcatggctat
gaggctggcaagaaggaccacgaggacttcttcaccccacagcagcatgacaaggccaag
aagcccaagaaggacaagaaaggcaaaaagggcaagcagcccctctacagcagcattgtc
actgtcgaggcctccaagcccaatgggcagcgctatgacagcgtgaatgagaagctctcg
gacagcccgggcataggccgctaccgctcagtcaatggtggcccgggcagccctgatcta
gcccgacattacaagtcgagctcaccactgcccactgtgcagctgcacccgcagtctccc
actgccggcaaaaagcaccaggccgtgcaggacctgcccccagcgaacaccttcgtgggt
gctggcgacaacatctccatcggctcggaccactgctccgagtacagctgccaggccggt
agcaagtacagcaagcaggtggatacagtacagactacgcagcaccctgaccacattgag
gaatcatgtaaaatgaatccatttcgtagagtgacgttttctgttgtgagtcagcctcag
gacccacatcaagggtcattgcagagttgctatgacagcggtctggaggagtcagaaaca
ccaagcagtaagagttcatcagggccaagactgggtgcccttccactcccagaggacaac
tacgaaaggactacgccggatggcagtgttggtgaggcagagcatatggaaaatggtgct
gagaaatgtgctccaggaggactctccattgtcttcccagattcaaggcctctgccagat
gtagccctgacagggaagtgtacccgagagtgtgatgaatatggccactcggactcctgc
tggatgccagttcgcacttctcctgaaagaaagcagaagagccagccaaaactctccact
ttcatgcctgttgatgaacggggcagtcaggaaaagctggccaatggagaagcttccctt
atgggtgatcgcaacagaaacctccttagcaaaaagttgacctcatcctatgagaccttc
agcgccgctagtttcagcaaaaaagaagaaggcaatccagaagatatcccccttacacag
acaggggaatataagccatctcctgtcaatactctaactagaagagaagtttacctgtag
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