Numida meleagris (helmeted guineafowl): 110398153
Help
Entry
110398153 CDS
T06015
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nmel04131
]
110398153 (SH3TC1)
Membrane trafficking [BR:
nmel04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
110398153 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
TPR_1
ARM_TT21_4th
SH3_2
SH3_1
TPR_10
TPR_19
TPR_7
Csd3_N
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
110398153
NCBI-ProteinID:
XP_021251213
LinkDB
All DBs
Position
4:87467969..87499081
Genome browser
AA seq
1340 aa
AA seq
DB search
MSSLAAGGSVSVLSSKATMEVGIPAPSLEGKQDSNLERKETEQGMCVPGWLCEAASAAVS
TARDRDKTDTMQEQMDYPQNEKCMNVSSRTLLSQAENFPTDISLKLTMVRRKSGRPDPRL
QRQLRGQLRLLENDSREVTAVFSELSARLLSIHSDQDLIVVTFKTFEEIWKFLTYHSLGF
VNHCMENLFLDQSFWLYSHEEEETGIEVYINEKSLNLMYRSLLVQEGAFFVLCPDNLVRK
ITATDCKINSYFETGAFTADAAGGSVDGDTTMLSDVSLEPLIPFHQWFLKAYSDPIDVTY
KTESKSIMQVATGSCLAVMNYESAVPEEISFQEGDKIEILGYFIECMEWFVGRHIFTGHI
GFVKTSHVKLDLPRNKAGDLDFLGAEEISFFPKEKNVEEMIHLLKQTSITDVCSVYRIDH
LEEQEFQKTRECEITCPHSNMVTTSKKNGKIEEFVKKFKNLEVTQAEGPAMERKDSASSS
NKEIFPSPEGPSFYIYQDDGQDSDVFESLLLFLNSKDYESDFKNLYDFSYAFINSMFYGF
SEEDELLSFFSLARELAKKSGMSWALARLCFLLGKLSVKKVKFSQARVYFEEALGAVTGG
FSDLYFVIALYTNLTVIYLTQKNKEKCSHVFDKATSLLMGIPNHICSADLESDILKYALK
RTILSQNKHAEARACFLLAKHYTARKQHEEALPFLERLQQLLNDLGLRNNLSKNCYFKLA
ESYNEKCLPHIVLSCIKVSSSQNSSTLMDSLKRIDLVIKNAPKLYGLRKLRQVLPSQIAP
YLTQALSSAFTNEQQGLYSTIYLSLAKLYSHHKQYGKAIVYMMKALDSDTSAKPEETINY
LVSLAWLYILYRQYDVAATILNAVVDSSWSNPQQLGVAYNMLAIALKRTNNTKKAAESCY
KALRLSEEANMTHNQAISLANFGVLCLHSAASKLAEHYYIKAVKLFAKLPSMDCGQEFIQ
TLLQLGCYYVSRTQREKGRFYYEWAFLVAMEISHLESQLQAIKLLCQFYSTVIPNEAQCV
IYNEYQLSLARKMSNKVLEGQILETISQLYLSLGTERAYRSALEYTKRSLGIFIDLQKKE
KEAYAWLRAGKIYYILRQNELVDLYIQVAQDAALYTGDPNLAMELFEAAGDIFFNGKWEK
EKAVPFYRDRALPLAVETGNKNTELRLYNKLVELLVNLKVYEESLEYAKASLMLSVNLGN
QLNERIAYHRLAAIHHHLGHCELAEHFYLKALSLCSSPLEFEEETLYYVKVYLNLGDIIF
YDLKDPFDAAGYYQLALAAAMDLGNKKAQLKIYTRLAIIYHNFLVDREMSLFFYQKARTF
ATELNVRRINLAPDQRYKSL
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtttggcagcaggaggcagtgtgtctgtgctcagctctaaagccaccatggag
gtggggatccctgctcctagtctagaaggaaagcaagatagcaaccttgagagaaaagaa
acagagcagggaatgtgtgtgcctggatggttatgtgaggcagccagtgctgcagtgagc
actgccagggacagagacaagacggacacaatgcaagaacaaatggattatccacaaaat
gaaaaatgcatgaatgtcagttccagaacccttctcagtcaagctgagaattttccaact
gatatctccttgaagctaacaatggtgagacgcaagagtggacgtcctgatcctagactc
caaagacagctcagaggacagctccgtcttctggaaaatgacagcagggaagtcacggca
gttttcagtgagctctctgcaagattgctctctattcacagtgatcaagatctaatagtg
gtgacatttaaaacttttgaagaaatatggaagtttctaacttaccattcattgggtttt
gtaaatcattgcatggagaacttgttcctagatcaatctttctggctgtattctcatgag
gaggaagaaacaggcattgaagtctatataaatgaaaaatcattaaatttaatgtacaga
agtctgctagtacaggaaggggcattttttgttttatgtcctgacaatctggtaagaaag
ataacggctacagattgcaaaataaactcttactttgagactggggcttttactgctgat
gcagcaggtggatctgtggatggtgacacaaccatgctgtctgatgtttctctggagccc
ttgatcccttttcatcaatggtttcttaaagcatattctgatcccattgatgttacatac
aaaactgaatctaaatccatcatgcaagttgcaacgggatcctgtctagctgtgatgaat
tatgaaagtgctgtgcctgaagagattagtttccaggaaggggacaaaattgagatcctt
ggctattttattgaatgcatggaatggtttgttggaagacatatctttactggccacata
ggctttgtaaagacaagtcatgttaagctggatttacctagaaataaagcaggagacctg
gattttcttggagcagaagagatatctttctttccaaaagaaaaaaatgtggaagaaatg
atacatttgttgaaacaaacctctataacagatgtttgctctgtgtatagaatagaccac
ttagaagaacaagaatttcagaaaacacgtgaatgtgaaattacatgtccacattctaac
atggtaaccactagcaagaagaatggcaagatagaagaatttgtgaagaagttcaagaat
ttagaagtcacccaggcagaagggcctgctatggaaagaaaggattctgccagctcttca
aataaggaaatctttccttcacctgaaggaccttccttctacatatatcaagatgatggt
caagattctgatgtctttgagtcattattactcttcttaaatagcaaagattatgagagt
gatttcaaaaacctctatgatttctcttatgcattcattaatagcatgttttatggcttt
tcagaggaagatgaactgctcagtttttttagtttagcaagggaattagcaaagaaatca
ggtatgtcatgggcactagcaaggctctgctttctcttaggcaagctgagtgttaaaaaa
gtgaagttttcccaagctcgggtttattttgaggaagcgttgggagcagtaactggagga
tttagtgatttgtactttgtaattgctctttacacaaatctaacagtcatctacttgaca
cagaagaacaaagaaaaatgttctcatgtttttgacaaggctacatctcttctcatggga
attcccaaccacatttgcagtgctgacctggagtcagatattctaaagtatgctctgaag
aggacgattttgagccagaacaaacatgcagaggctagggcatgctttctcctagcaaaa
cactacactgcacgcaaacaacatgaagaggcacttcccttcctagaaaggctgcaacag
ttgcttaatgacttgggtttacggaacaacttatctaaaaattgttatttcaaactagca
gagtcctacaatgagaagtgtctgccacacattgtgttaagctgtataaaagtctcctct
tcccagaactcaagtactttaatggattccctgaaaaggattgatttagtcatcaaaaat
gctcccaaactctatggtttgagaaaacttagacaagtacttccatcccaaattgcacct
tacctcacacaagcactttcctctgcatttacaaatgagcagcaaggactatacagcacc
atctatcttagtttagcaaaactgtacagccaccacaaacagtatggaaaagccatcgtt
tacatgatgaaagccctggactctgatacttctgctaagccagaggaaactattaactac
ttggtttcacttgcttggttatacattctttacaggcaatatgatgtggcagcaaccatt
ttaaatgctgttgtagactcctcatggagcaatcctcaacagttaggtgttgcttataac
atgcttgctattgctttgaaaagaacaaacaataccaagaaagctgctgaaagctgctac
aaagctctgcgtctttctgaagaagccaatatgactcataaccaagctatatccctggct
aattttggggtgctctgtctgcattcagcagccagtaagctggcagagcattattacatc
aaagcagtgaagctatttgccaagctgccaagtatggactgtggtcaagagtttatccaa
accctccttcagttgggatgttactatgttagtagaactcaaagagaaaaaggaagattt
tattatgaatgggcgtttttagttgcaatggagataagtcatctggaaagtcaacttcaa
gcaattaaactgctgtgtcagttctacagtacagtcattccaaatgaggctcagtgtgtc
atctacaatgaatatcaactatcgttagctagaaagatgtccaataaagttctggaggga
caaattttggaaaccattagtcagctctatttgtctttaggaacagaaagggcttacaga
tcagctcttgaatataccaaaagaagccttggaatatttatagatctccagaaaaaagag
aaagaggcatatgcttggctacgagcaggaaagatatattacattctaaggcagaatgag
cttgtggatctctatattcaggttgctcaagatgctgctctatacacaggagatccaaac
ttagcaatggaattgtttgaagctgctggagacatattttttaatggtaaatgggaaaag
gagaaagcagtgcctttctacagggacagggctcttccccttgctgttgagactggcaac
aaaaacactgaactcaggttatacaataaactggtggagctgctggtgaatctaaaggtt
tatgaggaaagtttggaatatgcaaaagcatctcttatgctcagtgtaaatttaggaaat
cagcttaatgaacgaatagcttaccatcggctggctgccatccatcatcatttgggtcac
tgtgaactagctgaacacttttatttaaaggctttgtccctctgttcctctcctctggag
tttgaggaggaaactctgtactacgtcaaggtgtacttgaacttaggagatattatattc
tacgatcttaaggatccctttgatgcagcgggctactatcaattggcactcgctgctgcc
atggacttgggcaataagaaagctcaactgaagatttacacaagacttgcaataatctac
cacaacttccttgtggatcgggaaatgtctctcttcttctatcaaaaggcaagaaccttt
gcaacagagctgaatgttagaagaataaatctagctcctgatcagcgttataagagttta
taa
DBGET
integrated database retrieval system
