Numida meleagris (helmeted guineafowl): 110398934
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Entry
110398934 CDS
T06015
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03030
DNA replication
nmel03410
Base excision repair
nmel03420
Nucleotide excision repair
nmel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110398934 (RFC1)
03410 Base excision repair
110398934 (RFC1)
03420 Nucleotide excision repair
110398934 (RFC1)
03430 Mismatch repair
110398934 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmel03032
]
110398934 (RFC1)
03400 DNA repair and recombination proteins [BR:
nmel03400
]
110398934 (RFC1)
DNA replication proteins [BR:
nmel03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110398934 (RFC1)
DNA repair and recombination proteins [BR:
nmel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110398934 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_14
AAA_22
Rad17
BRCT_2
AAA_5
AAA_16
RuvB_N
AAA_30
AAA_18
RNA_helicase
AAA_33
AAA_7
AAA_17
nSTAND3
TIP49
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
110398934
NCBI-ProteinID:
XP_021252675
LinkDB
All DBs
Position
4:75510162..75551630
Genome browser
AA seq
1158 aa
AA seq
DB search
MAAAPGGGDAKQDIRKFFGVVAPGKRQECEAVKKSEKIKNGEGESSGKKRGKETKVKSPP
SEDVPKQKQAYKKKRIIYDSDSEEEVQSVKKAKKPSEKKAATPKLGKVLKQHPVVYVSET
DEDDDFVNKRISLKPKENGTSAISCPGTATAKKGDVKPQSKTKPLSPVKLTPTSALDYFG
TRSVQRSDKKLVASKRKEPSQSRDSTLDDEAIARQLQLEEDSELERQLHEDEEFARTLAM
LDETPQKKKARRDSEEQTVLSIKSSPNVTERCKQSQRAKATNLPGEVKEQSKSENSKEPN
LHPQSSDGKIARVLTEKTLSLKPTSKLVALKQKEETTKKERGAQSLPSKEKNATGKEEKR
TPKKEKISPKKAESISPEDSEKRRNNYQAYRSFLNREGPKALGSKEIPQGAENCLEGLTF
VITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDCGQAKCEKASTLGTKIIDE
DGLFDLVRTMPGKKSKYELAAETEAKKAEPRHKKTPQKTESGKRNFSPLKREADRKKSNL
TPEKGGTFKSVKKEAAAVRKLTDFEHQTVEKKETPKPKGNLVSESSEHRMETLLWVDKYK
PMSLKAIIGQQGEQSCANKLLRWLRSWHKNTSEDGQAKTNKSGGKDDGTSFKAALLSGPP
GVGKTTTASLVCKELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGTSSSVSGK
HVLIMDEVDGMAGNEDRGGIQELIGLIRHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQR
PRLEQIKGAMMSIAFKEGLKIPPPAMNEIILAANQDIRQVLHNLNMWCAKDKSLTYDEAK
TDASRAKKDIKLGPFDVVRKVFAAGEEASRMSLIDKSDLFFHDYSLAPLFVQENYVHVKP
AAAGGDLKKHLMLLSRAADSICDGDLVDKQIRSKQNWNLLPTQAIYSSVLPGELMRGYMS
QFPVFPSWLGKFSSTGKHERIVQELALHMSLRTQACKRTVNVEYLTYLRDALVQPLKDLG
ADGVQDAIAFMDSYCLMKEDIDNIMEISMWGGKPSPFSKLDPKVKAAFTRAYNKEVHLTP
YSLHSVKTSRRQSGSMGTSEQSEELNVEESQSDEDEQDTVESDAMIKQKKVKSSKLPKRE
KNEETTKKEGKRKEKTRH
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcccctggaggtggtgatgccaaacaggatatccggaaattctttggcgtt
gtagctcctggaaagcggcaggaatgcgaggctgtgaaaaagagtgagaaaataaaaaat
ggggaaggagaatcgagtgggaagaaaagaggaaaggaaacaaaggtgaagagtccaccc
agtgaagatgttcccaaacaaaagcaggcgtacaagaaaaaaagaataatctatgattca
gattcagaagaggaggtgcagtctgtgaaaaaagccaagaagccatcagagaagaaagca
gctactcccaaacttggtaaagttctaaagcagcatcctgttgtttatgtttcagagaca
gatgaagacgatgactttgtcaataagagaatttccctgaaaccgaaggagaatgggaca
tcagcaatcagttgtccaggaacagctacagcgaaaaagggagatgtgaagccgcagtct
aaaaccaaaccattatctccagtgaaactgactcccacctcagctcttgattactttggg
acaagaagcgtccagcgatcagataagaaactggtcgcaagtaaaaggaaggaaccttca
caaagcagagacagcacgctagatgatgaggccattgctaggcaactgcagcttgaagaa
gattcagagctggagagacaactgcacgaagatgaagaatttgctagaactttggcaatg
ttggatgaaacaccacagaagaaaaaggctcggagagattcagaggagcaaacggtgttg
agcatcaagagcagtcctaatgtgacagaaagatgcaagcaatcccaaagagcgaaagca
acaaacttgcccggtgaagtaaaagaacaaagtaaatctgaaaattcaaaagagcctaat
ttacatccacaatcatctgatggtaaaatagcaagagtgctgacggagaaaaccttgtct
ttgaaacctacctcaaagcttgtggctctaaaacagaaggaagagactactaaaaaggaa
agaggcgctcaaagtttaccatcaaaagaaaaaaatgctacagggaaagaagagaaaaga
acaccaaagaaagagaaaatttctcccaagaaggctgagtctataagtcctgaggactct
gaaaagaggcgaaacaactatcaagcctaccgaagcttccttaatcgcgagggtccgaaa
gctctgggttccaaagagatacctcaaggagctgaaaactgcttggaaggcctgacattc
gtaatcacaggagttctggagtccattgaaagagatgaggccaagtctctgattgaacgt
tatggaggaaaagtgactggcaatgtcagcaagaagacaaactatctggttatgggacga
gactgcggacaggctaaatgtgaaaaggcatcaactttagggacaaaaattattgatgag
gatggcctatttgatcttgttcgaactatgccgggcaagaagtccaagtacgagctggca
gctgaaacagaggcaaagaaagcagagccaagacataaaaagacaccacagaaaactgaa
tctgggaaaaggaattttagtcccctcaaaagggaagctgataggaagaaaagtaatctt
acacctgaaaagggtggtaccttcaaatctgtcaagaaagaagctgctgccgttcgaaag
cttacagactttgaacatcaaactgtggagaagaaagaaacccccaaacctaaggggaac
ctggtttctgagagcagtgagcatagaatggagacattactatgggtagataaatacaag
cctatgtctcttaaggcaataattggacagcagggtgagcaaagctgtgccaataaactc
ctccgatggctccgaagctggcacaagaatacctcggaagatggacaagcaaagaccaac
aaatctggaggcaaagatgatggtaccagttttaaagcagcattactttctggtccacct
ggagttggtaaaactaccacagcttctttagtttgtaaggaactggggtacagctacgtg
gagctgaatgccagtgacactcgaagcaagaacagtctaaaggaagtagttgctgaatcg
ctgaacaacaccagcatcaaagacttctgttctggcacatcctcatcagttagcgggaaa
catgtattgatcatggatgaagtggatggtatggcaggcaatgaagacagaggagggatt
caggaactgatcggtttgattagacacacaaagatacctatcatctgtatgtgtaacgat
cggaaccatcctaaaattcgttccttggtccactattgttttgatcttcgttttcagaga
ccgcgtctagaacagattaagggcgccatgatgtcaattgcatttaaagaaggtttaaaa
attccaccacctgctatgaatgagataatcctggcagcaaatcaagacatcagacaggtt
ttgcataacctcaatatgtggtgtgcaaaagataaatcactgacttacgatgaggccaaa
acagatgccagcagagccaaaaaggatatcaaactgggcccttttgatgttgtccggaag
gtttttgctgctggagaggaggcttctcgaatgtctcttatagacaaatcagatctcttc
ttccatgactattccctagcacctctctttgtccaagagaactatgtgcatgtgaagcct
gctgctgctggaggagatctgaagaagcacttgatgctcttgagtagagctgctgatagt
atatgtgatggcgatctagtggacaaacagattcgtagcaagcaaaactggaaccttcta
ccaacacaggctatttattcgagtgttcttcctggggagctgatgagaggctacatgtcc
cagtttcctgtctttcccagctggctggggaaattttcatccacgggcaaacatgaacgt
atcgtccaagaactggcactgcacatgagtctcagaacccaagcgtgcaagaggacagta
aatgtggaatatttgacttatctgcgcgatgcacttgtccagccactgaaagacttggga
gcagatggtgtacaagatgctatagcgttcatggactcttactgcctgatgaaagaagac
attgataacataatggaaataagcatgtggggaggtaaacccagtcctttttcaaagctg
gatcccaaggtcaaagcagcttttacacgtgcctacaacaaagaggtgcatctgactccg
tattcccttcattctgtgaagacgtctagaaggcagtcaggatccatggggacctctgaa
cagagtgaagaactgaacgtggaagagagccagtctgatgaggacgagcaagatactgtt
gaaagtgatgcaatgatcaagcaaaaaaaggtgaagtcttccaagctgccaaaaagagag
aaaaatgaagaaacaacaaaaaaggaaggtaaaagaaaagagaaaacaagacattaa
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