Numida meleagris (helmeted guineafowl): 110399053
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Entry
110399053 CDS
T06015
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03020
RNA polymerase
nmel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110399053 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
110399053 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmel03021
]
110399053 (POLR2B)
03400 DNA repair and recombination proteins [BR:
nmel03400
]
110399053 (POLR2B)
Enzymes [BR:
nmel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110399053 (POLR2B)
Transcription machinery [BR:
nmel03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110399053 (POLR2B)
DNA repair and recombination proteins [BR:
nmel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110399053 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
110399053
NCBI-ProteinID:
XP_021252875
LinkDB
All DBs
Position
4:complement(54462036..54480205)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcaatatgatgaagacgacgacgagatcacccccgac
ctgtggcaggaggcgtgctggattgtcattagctcctattttgatgaaaaaggtttagtc
aggcaacagttggattcttttgatgagtttattcagatgtctgtgcagagaattgttgaa
gatgctccaccgattgatttacaagcagaagcccagcatgccacgggagaagtggaagaa
cctccccggtatctcctgaagtttgaacaaatctatctctccaaacctacgcattgggaa
agagatggagcaccgtcacctatgatgcccaatgaagccagactgagaaaccttacgtat
tcagcccccttatatgtggatataactaaaacagttattaaagaaggggaggatcagtta
cagacacaacatcagaaaacttttataggaaaaattcctattatgttacgatcaacgtac
tgtttgttaaatggcttgactgaccgtgatctttgcgaactgaacgaatgccctctggat
ccaggcggctattttatcatcaatggatcagaaaaggttctgatcgctcaagaaaaaatg
gctacaaacacagtatatgtgtttgcaaaaaaagattcaaaatatgcctacacgggagag
tgtagatcttgtctggaaaattcctctcgaccaacgagtaccatatgggttagcatgcta
gccagaggtgggcagggtgcaaagaagagtgctattggtcagcgcattgtagcaactttg
ccatatatcaagcaagaagtgccaatcatcatcgtctttcgtgcactagggtttgtgtct
gacagggacattttagaacacatcatttatgattttgaagatccggaaatgatggaaatg
gttaaaccttctctggatgaagcctttgtcattcaggagcaaaacgtagctctgaacttc
attggatcaagaggtgcaaagccaggcgtcaccaaggaaaagagaatcaagtatgccaag
gaagtcctgcagaaagaaatgcttccacacgttggtgtcagtgacttctgtgaaaccaag
aaggcctatttcctagggtatatggttcatagattgttgctggcggcgctgggaagaagg
gagcttgatgacagagatcattatggcaacaaaaggctggatcttgctgggccactgttg
gcttttctgttcagaggaatgtttaagaatttgctgaaggaagtgagaatatatgcacag
aagtttatcgacagagggaaagatttcaacttggaactggcaattaaaacgagaattatt
tctgacggtttgaaatattcattggccactggaaactggggtgatcagaagaaagctcat
caagcccgagcaggagtatctcaggtgttaaaccgcctgacttttgcatcaacactttcc
catctgagacgcctgaattctccaattggtagagacggaaagctggcaaagcccaggcag
ctgcacaatacactgtggggaatggtttgcccagctgagactccagagggtcatgcagta
ggacttgtgaagaacttagccctgatggcttacatttctgtggggtctcagccatcacca
attttggaattcttggaagagtggagtatggaaaacctggaagaaatatctccagcagca
atagcagatgctacaaagatctttgttaatgggtgctgggtaggaatacacaaagatcca
gagcagcttatgaataccctaaggaagctccgtcgtcagatggatatcattgtgtcagag
gtgtcaatgattagggatattcgtgagcgagaaatccgcatctatactgatgcaggcaga
atttgccgacctcttctaattgtggaaaaacagaagttgctgttgaagaaaaggcatatt
gaccaactgaaggaacgagagtataacaattacagttggcaggaccttgtggccagtggt
gtagtagagtacattgatacactggaagaagagactgtgatgctggccatgactccagat
gacttgcaggagaagggtgttgcatattgttcaacgtacacccactgtgagattcaccca
tccatgatcctgggagtgtgtgcatctattattcctttccccgatcacaaccagtctcct
aggaacacataccagtctgctatgggtaaacaggcaatgggagtctacattacaaacttc
cacgttcgtatggacaccctggcccatgttctgtactatcctcagaagcccctagtaaca
acacgctccatggagtacttgcgatttagagagttaccagcaggtatcaattcaatcgta
gccattgcatcgtatacaggctataaccaggaagattctgtcatcatgaaccgttctgct
gtcgacagaggctttttcagatctgtgttctatcgctcctacaaagagcaagagtccaaa
aaagggtatgaccaagaggaagtttttgagaagcctacccgtgaaacttgccaaggtatg
aggcatgcaatctatgacaaactcgatgatgatggtttgattgcgcctggggtacgtgtg
tctggggatgatgtcatcattggcaaaacagtaactctgccagaaaacgaagatgaactg
gaaagcactaacaggcgtttcacaaagagagactgcagcactttcctgcgaactagcgag
actggtattgtagatcaggtcatggtaacccttaaccaggaaggatacaagttctgcaag
atcagggtacgttctgtaagaatccctcaaataggagataaatttgccagcaggcatggt
cagaaaggaacctgcggtatccagtacaggcaagaggatatgcccttcacctgtgaaggc
atcactccggatatcattatcaacccccacgccatcccttcccgcatgaccattggtcac
ttgatcgaatgtcttcaggggaaggtgtcggcaaacaagggagaaatcggtgatgctacg
ccatttaatgatgctgtcaatgtgcagaagatttccaatcttctatcagattatggctat
catctcagaggaaatgaggtcctctacaacggcttcaccgggcggaaaatcacatcacag
atcttcattggtcctacatattatcagcggctgaagcacatggtagatgacaaaatccat
tctcgtgcaagagggcccatccagatacttaacagacagcccatggaaggtagatctcgt
gatggtggccttcgttttggagaaatggaacgagattgccagattgcccacggagcggcc
cagttcttgagagagaggttgtttgaggcgtcagacccgtaccaagtccacgtatgtaac
ctctgtggaatcatggccattgcaaacacaaggactcacacgtatgaatgccggggatgc
cgaaataaaacacagatatctctggttcgaatgccctatgcctgcaaactcctcttccag
gaactgatgtctatgagcattgcacctcggatgatgagcgtttag
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integrated database retrieval system
