Numida meleagris (helmeted guineafowl): 110400348
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Entry
110400348 CDS
T06015
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110400348 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmel03019
]
110400348 (EXOSC1)
Messenger RNA biogenesis [BR:
nmel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110400348 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
110400348 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
110400348
NCBI-ProteinID:
XP_021255838
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All DBs
Position
5:complement(13363968..13365717)
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AA seq
195 aa
AA seq
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MAPPARYCVPGERLCSTEEASAGSGTYARHGSIFASLAGCLQRCAEGGGLPVVSVVRDAE
AQLLPGVGAVVTCKVCSINSRFAKVNILYVGSTPLKSTFRGTIRREDIRATEKDKVEVYK
SFRPGDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAGVQMVPISWCEMQCPQTHTK
DFRKVARVQPQFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccggctcggtactgcgtgcctggcgagcggctgtgcagcacggaggaggcc
tcggcgggcagcgggacctacgcgcggcacggctccatcttcgcctcgctggccggctgc
ctgcagcgctgcgccgagggcggcgggctgcccgtggtgtcggtggtgcgggacgcagag
gcgcagctgctgcccggcgtgggggccgtggtgacctgcaaggtgtgcagcatcaactcc
cgctttgccaaagtgaacatcttgtacgttggctccacgccgctgaaatccaccttccgc
ggcaccatacggagggaagacattcgagccactgagaaggataaggtagaagtctacaag
agtttccgccctggtgacatagtcctagccaaagtcatatcgctgggggatgcacagtcc
aactacctgctgagcacggcagagaacgagctgggtgtggtggtggcacgcagcgaggca
ggggtgcagatggtgcccatcagctggtgcgagatgcagtgcccacagacacacaccaag
gacttccgtaaggtggcccgcgtgcagccgcagttcctgcagacctag
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