Numida meleagris (helmeted guineafowl): 110400968
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Entry
110400968 CDS
T06015
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03420
Nucleotide excision repair
nmel04115
p53 signaling pathway
nmel04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110400968 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
110400968 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
110400968 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nmel04121
]
110400968 (DDB2)
03400 DNA repair and recombination proteins [BR:
nmel03400
]
110400968 (DDB2)
Ubiquitin system [BR:
nmel04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110400968 (DDB2)
DNA repair and recombination proteins [BR:
nmel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
110400968 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
110400968
NCBI-ProteinID:
XP_021257063
LinkDB
All DBs
Position
6:complement(23610398..23655972)
Genome browser
AA seq
730 aa
AA seq
DB search
MRAGSGAARRAPSGASRRATLNFRAAAGLRGALPEASPSRRAARRAPLCPQAAPAGQHLA
QPPPFHKETFPSQPPPSRQDPRRSAESGPKAAPEEDTSLTSPAARHSPAVSRHLGRMGRA
LPYFSRGTRGLPPRPQQLPAGRARRWGQAGGGGAAPERLRPPRPLLIQLTGPGADPSPNV
EARCRPVTALLITIKTRRIFFCSSFLSCKAGLCGACGKQWSDRMAPVNEPKDKKNGKAHE
HQSEEAKSAGKRKLDCEGLENEPLAKKLFVRKTSKVQEKMGWNRGGTVMRNTRALFHQPK
WQCSIVHYVYQNMLGGSIRAQLRQCLQLPFLRSLTSYRLFRTASPFDRRVTCLEWHPTHP
STVAVGSKGGDIILWDYEVLSKTCFIKGKGPGDSLGDIKFSPYEAVKLYVASGDGTLSLQ
DLEGRAVQVISRAPDCGHENHNVCCWYCSVDVSASCRAVVTGDNLGNVVLLSTSGEEIWR
LKLHKKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKDKANFLHVLPHDKPVNAAYFS
PTDGAKLLSTDQRNEIRVYSCSDWTKPQHLIPHPHRQFQHLTPIKATWHPRYDLIAVGRY
PDPKFPGYSANELRTVDIFDGNTGEMVCQLYDPNASGIISLNKFNPMGDTLASGMGFNIL
IWSREEMVMKKQEHLLKAMTDQGIGSRSLSRRGGQRQANPGTSKLKAKLLSWEVEEMRTK
TKDSKSQGRK
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcggggagcggggcagcccgccgagcccccagcggtgcgagccgccgggcaacg
ctgaacttcagagcggcggccgggctgcgcggagctctgccggaagcctcccccagccgc
agagccgcccgcagagccccgctgtgcccgcaggcagcgcccgccgggcagcacctcgcg
caaccacctcctttccacaaggaaacttttccctcgcagccaccgccgagccgccaggac
ccccggcgctccgcagagagcgggcccaaagccgccccggaggaggacacttcgcttacc
tcgccggcagcacggcacagcccagcggtcagcagacacctgggccgaatgggacgggcc
ctcccctatttcagccgcgggacgcgggggctcccgccccgcccccagcagctgccggcg
gggcgggcccggcgctgggggcaggccggtggcggcggggcagcgccagagaggcttcgg
cctccgcgccctctcctgatccaattaacgggccctggcgcagatcccagccccaatgtc
gaggcccggtgcagacctgtgacagcactactgatcaccatcaagactagaaggatattt
ttctgcagtagtttcctttcctgtaaagcaggcctttgtggagcctgcggaaagcagtgg
tcagacagaatggctccagtgaatgagcccaaggacaagaagaatggaaaggcgcatgag
caccaatcagaagaggcaaaatcagctgggaaaaggaaactggactgtgaaggactagag
aatgagccactggccaagaaattgtttgtgaggaaaacatccaaagtgcaagagaaaatg
ggttggaatagaggtgggactgtgatgagaaacaccagagcccttttccatcagccgaag
tggcagtgcagcattgttcattatgtctaccagaacatgttgggaggctccatccgggca
cagctcaggcagtgtctacagctgccctttctgcgttctctgacctcataccgccttttt
cgaacagcaagtccctttgacaggagagtgacctgcctggagtggcacccaacacacccc
agtactgtagctgttggttccaaaggtggagacatcattctctgggactatgaagtactc
agtaaaacctgcttcataaaagggaaagggccaggagattctcttggagacatcaagttc
agtccttatgaggcagtgaagctttatgtggcatcaggggatggcaccctaagtctgcag
gaccttgagggcagagcggtgcaggtgatctcccgtgccccggactgtggccatgagaac
cataatgtttgttgctggtattgcagcgtagatgtttctgcaagctgccgtgcggtggtg
acaggtgataatctgggcaacgtggtcctgctcagcacttctggtgaagagatttggagg
ctgaaattgcacaagaagaaagtgactcatgtggagtttaactctcgatgtgagtggttg
ttggccacagcatctgtggatcagacagttaaaatctgggacctcagaaacattaaagac
aaagcaaattttcttcatgtacttcctcatgacaaacctgtcaatgcagcttacttcagc
ccaacagatggtgccaagctgctgagcacagaccagcgcaatgaaatcagggtttactca
tgttcagactggaccaagccgcagcatctgatcccacacccacatcggcagttccagcac
ctcacacctattaaggcaacatggcatcctcgctacgatctcattgcagtgggtcgctat
ccagaccctaagttcccagggtactcagcgaatgagctgcgaactgttgatatatttgat
ggaaacactggggagatggtctgtcagctctatgacccgaatgcctctggtataatctcg
ctcaataaatttaaccctatgggagacacgctggcctctggcatgggctttaatattctg
atctggagccgggaggagatggtgatgaagaagcaagagcatcttttgaaagccatgaca
gaccaggggattgggagccggagtttgtccagacgtggagggcagagacaggcaaaccct
gggacaagcaaactcaaagctaagttactgtcttgggaagtggaagagatgagaacaaaa
accaaagattctaaatcacagggaaggaagtga
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