Numida meleagris (helmeted guineafowl): 110401029
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Entry
110401029 CDS
T06015
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nmel03000
]
110401029 (SOX6)
Transcription factors [BR:
nmel03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110401029 (SOX6)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
110401029
NCBI-ProteinID:
XP_021257280
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All DBs
Position
6:complement(11274252..11684598)
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AA seq
817 aa
AA seq
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MPSNSEVLAGVVGESRTEEWMNSHYIRMSSKQATSPFACAADGEETMTQDLASRDKEEGN
SDQHATSHLPLHNVMHNKPHSEELPTLVTTIQQDAEWDGVISAQHRMESESNKLCSLYSF
RNTSTSPHKPDEGSRDRSELMTSVNFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSS
CMEKLLSKDWKEKMEKLNTSDLLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDE
QKKLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIP
IFPHDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYA
AQLASMQVSPGAKMPSTPQPPNTAGPLSPTGMKNEKRGTSPVTQVKDEAAQPLNLSARPK
TAEPVKSPTSPTQNLFPASKSSPVTVTNKSGIPSPLGGSLGRGSSLDILSSLNSPALFGD
QDTVMKAIQEARKMREQIQREQQQQQQPHGVDGKLPSMNNMGLNNCRNEKERTRFENLGP
QLTGKPNEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDS
RGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYY
EEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQP
QIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSIPVIQSTYGMKTDSGSLAG
NEMINGEDEIEMYEDYEDDPKSDYSSENEAHEAVSAN
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaaactctgaagtgctggctggtgtggtaggagaaagcaggacagaagagtgg
atgaacagccattatataagaatgtcttccaagcaggctacctctccgtttgcatgtgcc
gctgatggagaggaaacaatgacccaggacttagcatcacgagacaaggaagagggcaac
agtgatcagcacgcgacctctcatctgcctctacataatgtaatgcacaacaaacctcac
tctgaggagctaccaactctagtcacgaccatccaacaagatgctgagtgggatggagtc
atctcagcccaacacagaatggaatcggagagtaataagttatgttccctatattccttc
cgaaatacctctacctcaccacacaagcctgacgaaggaagtcgtgaccggagtgagcta
atgaccagtgttaattttggaacgccagaacgccgcaaaggaagccttgcagatgtggtg
gacacactgaagcagaagaaactagaagaaatgaccaggaccgagcaagaagattcatcc
tgcatggaaaaactactctctaaagactggaaggagaagatggaaaaattaaacacaagt
gatctccttggagaaattaaaggtacaccagaaagcctggcagaaaaagagcgacagctc
tctaccatgatcacccagctgatcagcttacgggagcagctcctggctgcccatgatgaa
cagaaaaagctggcagcctcacaaattgaaaaacaacgacagcaaatggatcttgctcgc
caacagcaagaacagattgcaagacaacagcagcaacttctgcaacagcagcacaaaatc
aatctactgcagcagcaaattcagcaggttcagggtcacatgcctccgctcatgatccca
atttttccacacgaccagcggacactggcagcggctgctgcagcccagcagggattcctc
ttccccccaggaataacttacaagccaggtgataactaccctgtgcagttcattccatca
acaatggcagctgctgctgcttctggactcagccctttacagctccagcaactgtatgca
gctcagctggcaagcatgcaagtttctcctggagccaaaatgccatctactccacagcca
ccaaatacagcagggccactctcacccactgggatgaaaaatgagaagagagggaccagc
ccggtaactcaagttaaggatgaagcagcccagccactgaatctttcagcccgacccaag
acagctgaaccagtcaaatccccaacatctccaacacagaacctcttcccagctagcaaa
agcagtccagtgacagtgacgaacaagagcggtatccccagcccccttggtggatctctg
ggaagaggatcctctttagatatcctttccagtcttaattcacctgccctgtttggggac
caggacacagtaatgaaagccattcaggaggctcggaagatgagagagcagatccaacga
gagcagcagcagcaacaacagccacatggtgttgatggaaaattgccctccatgaataac
atgggtctaaacaactgcagaaatgaaaaggaaagaacaaggtttgagaatttaggccca
cagttaacagggaaacccaatgaagatggaaaactgggccctggtgtcatcgatcttact
aggccagaagatgcagaaggaagtaaagcaatgaatggctctgcagctaaactacagcag
tattattgttggccaacaggaggtgccactgtggctgaagctcgagtctaccgggattcg
cggggtcgagccagtagtgaaccacacatcaaacgaccaatgaatgctttcatggtttgg
gcaaaggatgagcgtcgaaaaattctccaagctttccctgacatgcacaactccaacatt
agcaaaattctaggatctcgctggaagtctatgtcaaatcaagaaaaacaaccttattat
gaagagcaggcacggctaagtaaaatccacctagaaaagtatcctaattacaaatacaaa
cctcgaccaaaacgtacctgtattgttgatggaaagaaattgcgtattggtgaatacaaa
caactgatgaggtctcgaagacaggagatgaggcagttttttaccgtaggacaacagcct
caaattccaatcaccacgggaacgggggttgtctatcctggtgctattaccatggcaact
accacaccatcacctcagatgacatcggattgctcaagcacctccgccagccctgagccc
agcatccccgtcattcagagcacttatgggatgaagacggacagcggaagccttgccggg
aacgaaatgataaatggagaggatgaaatcgaaatgtacgaggactatgaggatgatccc
aaatcagactatagtagtgaaaacgaagcccatgaggcagtcagtgccaactga
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