Numida meleagris (helmeted guineafowl): 110401060
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Entry
110401060 CDS
T06015
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110401060 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmel03019
]
110401060 (CSTF3)
Messenger RNA biogenesis [BR:
nmel03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110401060 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
110401060
NCBI-ProteinID:
XP_021257351
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Position
6:complement(6378015..6424115)
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AA seq
718 aa
AA seq
DB search
MSSEGGTGEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVA
QFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKV
HSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE
KSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLAAVIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAP
PGLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKLPDTVDEAVRII
TGGLPEIAVEGNGPVENNAMLNKAVKRSNEDSDDDEEKGSVVPPVHDIYRARQQKRIR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaaggaggtaccggcgagcaggctgccgaatatgtcccagaaaaagtgaag
aaagctgaaaagaaactagaagagaatccatatgaccttgacgcttggagcattctcatt
cgagaggcacagaatcaacctatagacaaagcacggaagacctatgaacgccttgttgcc
cagttccccagttctggcagattctggaaactgtacattgaagcagagattaaagcaaaa
aattatgacaaagtggaaaagttatttcagcgatgccttatgaaggttttacacattgat
ttatggaaatgttacctttcctatgtacgagaaaccaaggggaagctgcctagttacaaa
gaaaaaatggctcaggcatatgattttgctctggataagattggcatggaaatcatgtca
taccagatctgggtggattacatcaattttttgaagggcgtagaagctgtaggatcttat
gcagaaaaccagaggataacagctgtccgtagggtgtaccagcgtgggtgcgtgaatcca
atgattaacatagaacagctctggagagattataacaaatacgaagagggaatcaatatt
cacttagcaaagaagatgattgaagacaggagtagagattacatgaacgcacgacgtgta
gcaaaggaatacgagacggtcatgaaggggctggaccgcaacgccccgtccgtccccccc
cagaacaccccgcaggaggcccaacaggttgacatgtggaagaagtacatccagtgggag
aagagcaatcctctgcgtacggaggatcaaactctcatcacaaaaagagttatgtttgcc
tatgagcaatgccttttggttctgggacatcacccagatatctggtatgaagctgcacag
tatcttgagcaatctagtaagctgctagctgaaaaaggggacatgaacaatgctaaactt
ttcagtgatgaggctgctaatatttatgagagagccatcagcactttactaaagaagaat
atgcttctctattttgcgtatgcggattatgaagagagtcgaatgaagtatgagaaagtg
cacagcatatacaaccggctcttggctattgaggacatcgatcccactctggtttatatc
cagtatatgaaatttgcaaggcgagcagaaggcatcaaatctgggagaatgatatttaag
aaggcaagagaggacacccggacccgccaccatgtctacgttacagcggctttaatggag
tattactgtagtaaggataagtctgtggccttcaagatttttgagctagggctgaaaaaa
tacggagacattccggaatacgtactggcatatatcgactacctgtctcaccttaatgag
gacaacaacacaagagttttgtttgagcgcgttttaacttcagggagcctcccacctgag
aaatcaggggaaatctgggctcggtttttagcttttgaaagtaacattggcgatctcgcc
agtatcctgaaagttgaaaaacggaggtttacagcattcaaggaagaatacgagggtaaa
gaaacagctctgcttgtagacaggtataagttcatggacttgtacccttgctctgcaagt
gaacttaaggctcttggttataaggatgtctcccgtgccaagttggcagctgtaattcca
gaccccgtggttgcgccgtccattgtgcctgttctcaaagatgaagttgacagaaaacct
gaatatcccaaaccagacacgcagcagatgattccatttcagccacgccacttagcacct
ccaggtttacatccagtaccaggaggtgtatttcctgttccaccagcagctgtagtccta
atgaagctcctgccacctcctatttgttttcagggtccctttgttcaagtggatgagctc
atggagatatttagaagatgcaaactgccagacactgtcgatgaagctgtacggataatt
actggaggcctacctgaaatagctgtggaaggcaatggacctgtggaaaacaatgctatg
ctcaataaggcggtcaagagatcaaacgaggattctgacgacgatgaggagaaaggttca
gtagttccccctgtacacgacatttacagagcacgacaacaaaagagaatccggtga
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