Numida meleagris (helmeted guineafowl): 110401179
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Entry
110401179 CDS
T06015
Symbol
RPAP1
Name
(RefSeq) RNA polymerase II-associated protein 1 isoform X1
KO
K20826
RNA polymerase II-associated protein 1
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmel03021
]
110401179 (RPAP1)
Transcription machinery [BR:
nmel03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110401179 (RPAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
110401179
NCBI-ProteinID:
XP_021257651
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All DBs
Position
6:complement(25323950..25364589)
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AA seq
1438 aa
AA seq
DB search
MFSRPKPGESEADLIHFQNQFLAARASPAVKIVKKADKRKGEERSTDAERPQLLDNKDVV
MLDDFPDILPALTPGPPKKSKIKTACVHFDDEDPEERLENHDQHITAVFSKIVERDTSAE
AVTMPVPTGDPFPRIFHRSEIKSEVKVGSGRKSIFAQKMAARRAAEKPATAPSAECTQIR
SASLDVLNPEGSAEEAPCSGNRDNRADDVFISQRPSIITGEGLGSQKSEQEAQAIHRENL
EKLQSMSQEEILKEQERLLAQLDPSLVAFLKSRRSGSVGQKNEIKMEQNRPEEFVESLTV
PQHDVGASLSIQESGLEESVRRDENTKMEITDDDLPVKPRKEWIHMDNVEFEKLEWMKDL
PSPRQKKTKKGMQARFSLKGDLIPADADLPTHLGLHHHGEEAERAGYSLQELFHLSRSQL
IQQRTLALQVLGRIVQKARAGEFASSLKGSVLRLLLDAGFLFLLRFSLDDTVDNVMAASV
GALRALLVSFDDEKYLDWTFSWYQGMATFPLVPNNEEEEEDEEEEEELTGTEKSQNKKRK
DENKPDADVARYDVVKGLLKTRIQHRLRYILEVVRPVPTVVLDILHILTRIARHSSEACT
QLLDCPRLIDTIVKEFLPTRWDPHVAEPGCLLTSLHGVACAAAMKFIRVLASGGRNATAR
LLNKFEMKSRLIRFTAEDPQDLLLPREEAIRLSTEAFRLWAVAAGYGQACDLYRDLYPVL
VRILQSLPELLSASHEKNPIFELSVQRAAAVVTLLVHVTQTAGCTAELHSKLSSDSSEDS
EQIPPPPVTWNQVSGLLPFLETGLKKFLQVISQTETWQILQPLTTTYMIYLGVYYRACGQ
QPSVNPIDCLEELERLTSEVLQPLLSQPAMHSMWDLLRPCSALCNPLSCSPAPESVFSIV
SLSCTGGKPPLSLLGSKSPFPFLTALLFLIDGITHIHKGLICKYSSVLSFEGLKDYLHQS
WQTVHPSVTPASVWILRHEYHLQYFALVLARKMAGTCPDYNRHASLHHCVAMALLSRLLP
GSEHLAYEVLLDLAFNPEFLPEGKTGGPEAADFSDILHLGTSAKLSQPGSAAASSSKPTR
GALLRESYQNLPAIRSCYLSHFLHLQPALVRSQASYQGQNYLIQSMLLPEVRGPILPSDW
PFFPLISLYNKVSNAEIRGAVLNSLPLDLVNTVTWNLQWVLLLETWRPKSLQSIPTAAKL
ARLMCIFLTGGDLFLEAPIHCYTAALLSVYCQPKALDSLNLDAPLPGLASFHDLYISLLE
QFEGVSFGDPLFGVFVLLPLQKCFSVHLRLSLFGEHTSILRALGVPLQQFPVPLERYTSP
PEDNLNLLRHYFRTLVTGALRNTWCPVLYVVAVAHVNSFIFSQDSTTQEADAARKSMLRK
TWLLVDETLKKHLLYYRLLNAESPLGFDLYEQLPPIRLKYLQMVIQKENKENAPVLLS
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgttctcaagaccaaagcctggggagtctgaggctgacctgatacactttcaaaaccag
tttctggcagccagagcttcacctgcagtaaagattgtgaagaaagcagataagaggaag
ggagaggaaaggagcacagatgctgagagaccacagctactggacaacaaggatgtggtc
atgctagatgattttcctgatattctccctgctctaactcctggtcctccaaaaaagtcc
aaaatcaaaactgcctgtgtccactttgatgatgaagatccagaggaaagactagagaat
catgatcaacacattacagcagtcttcagcaaaatcgttgaacgagacacaagtgcagaa
gcagtgaccatgccagtgcccactggagacccatttccgaggatatttcatcgttctgag
ataaaaagtgaggtgaaggtgggatctggaagaaaaagcatctttgcacagaagatggca
gcaagaagagctgctgaaaagccagcaacagctccctctgctgagtgcactcaaataaga
tcagcttctttggatgttctgaatcctgagggatcagcagaagaggcaccgtgctctggc
aacagggataatagagctgacgatgttttcatctctcagcggccttctatcataacggga
gagggtcttggaagccaaaagagtgagcaggaagctcaggctatccacagagagaattta
gagaagctgcagtccatgtcccaggaagagatcctgaaggagcaggaaaggcttctggct
cagctagatcccagtttagttgctttcttaaagtcacgacgcagtggtagtgtaggccag
aaaaatgaaataaaaatggaacagaacagaccggaggagtttgtggaatctctgactgtg
cctcaacatgatgtaggagcatctctttccattcaggagtcaggtctggaagaatctgta
aggagggatgaaaatacaaaaatggaaatcacagatgatgatctgcctgtgaagccaagg
aaagaatggattcacatggacaatgtggagtttgagaagctggagtggatgaaagatttg
ccttcacccagacagaagaaaactaaaaagggaatgcaagctcgattcagtttaaaggga
gacttgattcctgcagatgctgatttgcctactcatctaggtctgcatcaccatggagaa
gaggcagagagggctggttattctctccaagagctctttcatttgtctcgcagccaactt
attcagcagaggacactggccctacaggtcttgggtcgtattgttcaaaaggccagggct
ggagagttcgcttcctccttgaagggcagtgttctgcgtctgcttcttgatgctggattt
ctcttcttgctccgcttctcgctggatgatactgttgataatgtcatggcagcatctgtt
ggtgctctccgggctctgctggtgtcatttgatgatgagaaatatcttgattggactttc
tcatggtaccaagggatggctacattcccacttgtccccaacaatgaggaagaagaagag
gatgaggaagaagaagaagagttaactggaacagagaagtctcagaataaaaaacgaaag
gatgaaaacaagccagatgcagacgtagcccgttacgatgttgtaaagggacttctgaag
acgcggattcagcaccggttgaggtatatccttgaggtggtacgacctgttccaacagtt
gtcctggatatcctgcacatccttacccgcatagcaagacactcctccgaagcatgcacc
cagctgcttgactgtcctcggttgattgacaccattgtcaaggaatttctccctactcga
tgggatcctcatgtggccgaaccaggatgtttactcaccagtctccacggagttgcttgt
gctgctgctatgaagttcatcagagtattggcatctggaggcagaaacgcaacagccagg
ctgcttaacaagtttgaaatgaagagccggttaattcgatttacggctgaagatccgcag
gatctgcttctgccaagggaagaggccatcaggctgagcactgaagccttccggttgtgg
gcggtggctgctggttacggtcaggcctgtgatctctaccgggatctctatcctgtgctg
gtaaggatactgcagtccctgcctgagttgctcagcgcaagccatgagaagaaccccata
tttgagttatctgtccagcgagctgcagcagtggttactctgctggtacatgtgacacaa
actgcaggctgcacggcggagctgcactccaagctgagcagtgatagctcagaagacagt
gaacagattccacctccgccagtaacatggaatcaagtgtcaggcctactgccctttctt
gagaccggtctgaaaaagttcctgcaggtgatatctcaaacagaaacttggcaaattctt
cagcctctgaccacaacttacatgatctacctgggagtttattacagagcttgcggtcaa
cagccatcggtcaatccaattgactgcttagaggaattggaacgtttgacatctgaggtg
ctgcagccccttctcagccagccagccatgcacagcatgtgggatttgctcaggccgtgt
tctgctctgtgcaaccctctgtcctgttctccagcacctgaatctgtcttcagcattgta
tctttgagttgtactggaggcaaacctcctctgagcctacttggctccaagtctcctttt
cctttcctcactgccctcctgtttctcatcgatggcatcactcatattcacaaaggactg
atctgcaagtacagctctgtgctgagctttgaaggcctgaaggattatctgcatcaaagc
tggcagactgttcacccctctgtaactcctgcgtctgtgtggatactgcgccatgagtat
catctgcagtacttcgctttagtattggctaggaaaatggcaggcacttgtccggattac
aaccgtcatgcctcgctccatcactgcgttgccatggcattgctgagccgtctgttgcca
gggagcgagcatctggcttatgaggtcctgctggatcttgcctttaatccagagtttctt
cccgaagggaaaactggagggccagaagcagctgacttttccgatatcttgcatctgggt
accagtgccaaactgtcacagcctggctctgcagcagcatcttcttcaaagcctactcgt
ggtgccctgctgagagaatcataccagaatctgcctgccatccgctcctgctacctctct
cattttcttcacttgcagcctgcccttgtgcgttcccaagcatcctaccaaggacagaat
tacctcatccaatcgatgctgcttcctgaagtcagagggcctatcctgccttcagactgg
ccattctttccacttatcagcctctacaacaaagtgtcgaatgcagagatacgcggggct
gtgctgaactctctcccacttgatttagtcaacactgtgacctggaaccttcagtgggtc
ttgttgctggaaacctggcgccctaaaagccttcagagcattcctactgctgccaaactt
gcacgacttatgtgtatcttcctcacaggtggtgacctctttctagaagcaccaatccac
tgttacacagctgcacttctttctgtgtattgccagcccaaggctttggactccctgaac
ttggatgctccgctccctggtttggcatccttccatgatctctatataagcctgctggag
cagtttgaaggtgtctcctttggagatccactctttggagtcttcgttcttctacctctg
cagaagtgtttcagtgttcatctgcgtctttctctttttggggagcacacaagtatccta
cgggcactgggagtgccactccagcagtttcctgtgcctctcgagcggtacacttcccct
cctgaggataacttgaacctcctgcgacattacttccgaacattggtcactggcgcactg
cgcaacacctggtgccctgttctttatgtggtggctgtggctcatgtgaacagctttatt
ttctcccaagacagcacaactcaggaggctgatgctgctcggaaaagcatgctgcgaaag
acttggctcttggtggatgagaccttgaaaaagcatcttctctactacagactgctgaat
gcagagagccctttgggatttgacctttatgagcaactccctcccatacgactgaagtac
ctgcagatggtgatacagaaagaaaataaagagaatgcaccagtgctactctcatag
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