Numida meleagris (helmeted guineafowl): 110402226 Help Entry 110402226         CDS       T06015                                  Symbol RC3H1 Name (RefSeq) roquin-1 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism nmel  Numida meleagris (helmeted guineafowl) Brite KEGG Orthology (KO) [BR:nmel00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:nmel03000]     110402226 (RC3H1)    04121 Ubiquitin system [BR:nmel04121]     110402226 (RC3H1) Transcription factors [BR:nmel03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     110402226 (RC3H1) Ubiquitin system [BR:nmel04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     110402226 (RC3H1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 Prok-RING_4 zf-CCCH zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf_CCCH_4 FYVE zf-CCCH_4 PaaA_PaaC Vesi_VP2 Baculo_IE-1 zf-RING_4 zf-RING_10 zf-RING_6 Motif Other DBs NCBI-GeneID:  110402226 NCBI-ProteinID:  XP_021259710 LinkDB All DBs Position 7:7883988..7943956 Genome browser AA seq 1124 aa AA seqDB search MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD IELLPVNSALLQLVGAQVVPEQQPITICSGAEDTKHYEESKKCVEELALYLKPLSSARGV GLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQL SSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASK TSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIA PDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLEL LANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMC RDMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSD EGGVDLPNRKTSALPNGIVSTGSPGTQLIPRGTESNYETALKPGKMDHLSSSAPGSPPEL LESVPKSSISALPVNPHPVPARAPTDLPSVSVTKQLQMVPRGSQLYNTQQADIFYQDHRG AAPPFEPAPYQQGVYYPQTMSRFVRPPPSAPDPGPPYLDHYSPYLQDRVVSPQYTQPQQY PPMGQPIYPPHYDSRRVYPPVQPYQREEIARGSPVPIEISQAAVPSYVPESRDRYPQTEG YCPVAPHLGQIRPSCHRPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPHPFHSE EYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSVEMANVDSKAMR DQRLDMQRRAAEAGDDDLIPFGDRPTVSRFGAISRTSKAMYQNSGPIQAMAVQGASTKSI ISDYSPYGTHGGWGGSPYSPHQNIPSQGRFNDRERLSMSDVAGHGKQLPSAEREQQLRME LQQVDHQISQQTQMRGLEAVSNRLLLQREATTLAGQPQPPPPPPKWPGMISSEQLSLELH QVEREIGKRTRELSMESQSSLDIKNKLGTTKQTENGQLEPQSKVPAEDLALAFSSDVPNG SALTQENISLLSNKAASLSLSEDPEGGGDSQDSQRMGVTPTSAP NT seq 3375 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagctccacagtggacggattttctctcctgtccaatttgcacacagact tttgacgaaacgatccggaagcccatcagcttgggttgcggccacactgtctgcaagatg tgcctcaacaagctccaccgtaaggcgtgcccttttgaccagaccactatcaacacagac atcgaacttcttcctgtgaactcggccttgctgcagctagtgggtgctcaggtagttcct gagcagcagccaattactatatgtagtggagctgaagataccaagcattacgaggagagc aaaaaatgcgtggaagaattagcattgtacctcaaaccactcagcagcgcaagaggtgtg ggtctgaacagtactactcagagtgtcctgagtcgtcctatgcaaaggaaacttgtgaca ctggttcactgccagctagtggaggaagaaggacggatcagagccatgcgtgcggcacgg tcgcttggggaaagaacagtcacagagctcattcttcagcatcaaaatccccagcagctc tcttccaacctctgggctgcagtgagagccagagggtgccagttcctcggaccggctatg caagaagaggctttaaagctggttctgctggctctggaagatggatctgctttgtcacga aaggtcttggttctctttgtggttcagaggctggagccacgatttcctcaggcttctaaa actagcattgggcatgttgtccagcttctttacagagcctcatgcttcaaggtgacaaaa cgtgatgaagattcctccctgatgcaactgaaggaggaatttcgtacttacgaagctctg agaagggaacacgattcccaaattgttcaaattgccatggaagcaggtttacgcattgca ccggatcagtggtcctcgctgttatatggagaccagtctcacaaatcccacatgcagagt atcattgacaagttgcagaccccagcctcgtttgcacagagtgttcaggaattaactatt gctcttcagaggactggagatccagctaacctgaatcgccttcgacctcaccttgagctc ctggcaaatattgatcccagcccagatgctccacctccaacgtgggaacaactggaaaac gggctggttgctgtaaggactgtggttcacggcttagttgattatatccagaatcacagc aagaaaggaacggatcagcaacagcctcctcagcacagcaaatacaagacatacatgtgc cgagacatgaagcagagaggaggatgcccccgaggggctagctgcacctttgcacattca caagaggagctagagaaatttcgtaaaatgaacaagcgtctggttccaagaagacccctg agtgcctccctgggccagctgaatgaggtgggcctgccttcaggagctatcctctcggat gaagggggagtggacttgcccaacaggaaaacctctgctctgccaaacggaattgtgtca acaggcagcccagggacacagcttattcctcgagggactgagtccaattatgaaactgct ctgaagccagggaagatggaccatctgagtagcagtgcccctggatcccctcctgaattg ctggaatctgtccccaagagctctatttctgccttaccagtgaaccctcatcctgtgcct gctcgggcaccaacagatctgccatcagtgtctgtcacaaagcagttgcaaatggtacct cgtgggtctcagttgtataatactcagcaggcagatatcttttatcaagatcatagagga gctgccccaccgtttgagccagcgccctaccagcaaggagtttactatcctcaaaccatg tctcgctttgtgcgacctcctccgtcagctccagatcctggcccaccttatttagaccat tactcaccctaccttcaggatcgtgtggtgagcccccagtacacgcagccgcagcaatat cctccgatgggacaacccatatatccaccgcactacgacagccgtcgtgtatacccccct gtccagccatatcagcgagaggagattgcccgaggaagccccgttcccattgaaatttca caggcagcagtaccttcctacgtacctgaatccagggacagatacccacaaacagagggt tattgcccagtggctccgcatctcggtcagatcagaccttcgtgccaccggcctcatccc agcctggatgaactccaccgacgaaggaaggagatcatggcgcagttagaggagaggaag gttatttctccacctccttttgcaccttctccaaccttgcctcatccttttcattcagaa gagtacttggatgaagacctgaaggtagctgggaaatacaaaggaaatgactacagccag tactctccctggtcctgtgacaccatcggctcctacattggaaccaaagatgcaaaaccc aaagatgttgtggcagcaaggagtgtggagatggcgaacgtggatagtaaagccatgcgt gaccaacgattagacatgcagaggagagcagcagaggctggtgatgatgacctcattccg tttggagaccgaccaactgtgtcgagatttggggctatctctcgtacttccaaagcgatg taccagaattcgggtcccattcaggccatggcggtgcagggagcttccaccaaatcaatc atttcagactacagtccttatggaactcatggtggctggggaggctctccatattctccc catcagaatataccttctcagggacgtttcaatgacagggagagactgtccatgtcagat gtggctggtcatggaaaacagttgccctcagctgagcgagagcagcagctgcgcatggag ctgcagcaagtggaccatcagattagccagcagacacaaatgagaggactagaggctgtt agtaacaggctgctgttgcagagggaggcgactaccctggcaggccaaccacagccccca cccccacctcccaagtggcctgggatgatctcaagtgaacagctgagcttggagctacac caggtggaaagggaaattgggaagagaacccgggagctgagcatggaaagccagtcttca ctggatataaaaaacaaactgggcaccactaaacagacagaaaatggacagttagaacca caaagcaaggttccagctgaggacctcgcactagcattcagcagcgatgttccaaacgga tcagccttgacacaagaaaacatcagcctcctgtcaaacaaggcagcatctctcagcctg tcagaggacccagagggaggaggagacagccaagactcccagaggatgggagttacgccc acatctgctccatga

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