Numida meleagris (helmeted guineafowl): 110402384
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Entry
110402384 CDS
T06015
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110402384 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmel03019
]
110402384 (NDC1)
Messenger RNA biogenesis [BR:
nmel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110402384 (NDC1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
110402384
NCBI-ProteinID:
XP_021260087
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Position
7:complement(25199887..25215666)
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AA seq
601 aa
AA seq
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MSVVILVISVFNVEFYAVVPSIPCSRLALIGKIIHPQQVVHSVAHAIMGMLVAWCAAVMT
KGKFQFLAVPCTISESLDDGVPQMCLNEYHLFFLLSGAFMGYCYSLLYLINNMNYLPFPI
IQQYKYLRFRRSLPLLVKHSCVESLYLVRNFCVAYYFFGYIPKMWISTTMDLRIDSKLHP
LDTLSGLLDLSLFYHAWLSGVFLLVTWYIAWLFFRIYATETHHFPVQPTFAEETDQCLPK
ILSSNPPLIIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTAISRECLSLLTDLT
QRLIAQQEAAAANGRAKQQVGEMKVSPQTPGAAVAEDIPFQLQRSNVIPRAAMSSLVKSS
LMPLKASPGSDIGSPFSSPALNCKAGILDLNSPWHGSVQSPHIMRRGPKLWTSGSGLQMN
GSHHESFPVLSVARVGSEAVQPSFIYTWLQNKQEQIKNFLSRRVLIMYFFSKHPEASIQA
VFSDAQMHIWALEGLSHLVAASFTEDQFGVVQTTLPAILNTLLTLQEVVDRHFKLPHVSS
KPPRSSGSLVDTSYKTLRFALRASLKTALYRITTVFGEHLNAVQVSTEHKKRLQQFLEYK
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtgatactggtaataagcgtcttcaacgttgagttttatgcagttgtgcca
tcgatcccatgctctcgattagcgctgataggaaaaataattcaccctcagcaagttgtc
cattcagttgctcatgctataatgggaatgttggttgcttggtgcgctgcagttatgaca
aaagggaagttccaatttcttgctgtgccctgcacaatttcagaaagcctcgatgatggt
gttcctcagatgtgcctaaatgaataccacctcttttttctactttctggtgctttcatg
ggatactgttacagtctcttatatcttattaacaatatgaattatttgccgttcccaatc
atacagcaatacaagtacttacgtttcagaagatctttgcctctcctcgttaaacacagt
tgtgtggaatcactgtatttggttagaaacttctgtgttgcctattacttctttggttat
atcccaaagatgtggataagtaccacaatggatcttcgtatagacagtaaattgcatcct
cttgacactctgtctggcctattggatctctccttattttaccatgcctggttgtctggt
gtgtttcttctggttacctggtacattgcatggttgttcttcaggatctatgctacagag
acgcatcactttcctgttcagccaacttttgctgaggagacagaccaatgcctgcctaaa
atcttaagcagcaaccctccacttattataaagtttttagccttacaggacttgatgtta
ctttcccaatattctcctgttcgacgtcaggaagtcttcagccttagccagccaggtggg
cacccacacaactggactgcgatatcaagggagtgtttgagtcttctcactgatctgacc
cagaggctgattgcacagcaggaagctgcagcagcaaatgggagagcaaagcagcaagtg
ggagagatgaaagtatctccgcagactccaggagctgcggtggcagaagatatccctttc
cagttacagaggtctaatgttattcctagagctgccatgtcttccctggttaaatcatcc
ttaatgcctttaaaggcatcgcctgggtctgatattggttcacctttcagttcacctgct
ttaaattgcaaggcgggaattctggatttaaactctccttggcacggatcagtccagagt
cctcacatcatgcgcaggggaccaaagctgtggacgtcaggttcaggtctgcaaatgaat
ggttcccaccatgaatccttcccagtgctctctgttgcaagagttggcagtgaggcagta
cagccaagttttatttacacatggctccagaacaagcaagaacagataaaaaacttctta
tcaagacgagtgctgatcatgtatttcttcagcaagcatccggaagcctccatccaagct
gttttctctgatgcccagatgcacatttgggcattggaaggtctgtctcatttggtagca
gcctcctttactgaagaccaatttggagttgttcaaactacgctgccagctatcctgaat
actttactgacccttcaggaggttgtagacagacatttcaaactgcctcatgtttctagc
aaacctcctaggagttcaggaagtctggtggacacatcctacaaaacactacgatttgca
cttagagcatctttgaaaacagcgctgtaccggataaccactgtctttggagaacactta
aatgcagtgcaagtctctacagaacataagaaaagacttcagcagttcttggaatataaa
gagtaa
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