Numida meleagris (helmeted guineafowl): 110403268
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Entry
110403268 CDS
T06015
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel04382
Cornified envelope formation
nmel04510
Focal adhesion
nmel04512
ECM-receptor interaction
nmel04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110403268 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110403268 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110403268 (COL4A6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110403268 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nmel04147
]
110403268 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
nmel00536
]
110403268 (COL4A6)
Exosome [BR:
nmel04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
110403268 (COL4A6)
Glycosaminoglycan binding proteins [BR:
nmel00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110403268 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
110403268
NCBI-ProteinID:
XP_021262016
LinkDB
All DBs
Position
8:14129468..14252511
Genome browser
AA seq
1702 aa
AA seq
DB search
MGPAPGRAGALLLLPVLLLCLSAEPASAGGKKSYSGPCGGRDCSAGCKCFPEKGARGRPG
PIGIQGPIGAPGFTGPEGLPGAKGERGAAGPPGPAGHKGNKGSMGVPGFQGINGIPGHPG
QSGPRGPPGLDGCNGTIGSPGVSGQDGFPGIPGLPGRPGPKGLKGEPVFAQGSLKGMKGE
NGLPGLDGISGPKGFPGPTGSAGPIGLPGLQGPVGPPGPPGPKGNMGLGFQGEKGEKGDV
GLPGPPGPPPSTGILEFMGFPKGKQGEKGEPGPRGLPGDKGLPGLPGFGGVGEKGEKGVP
GLPGGRGLLGLDGSNGIPGRKGHPGIPGYPGLDGVEGTKGEVGDIGPPGPPIVVDKEGVV
ISGAPGDPGNPGIPGPPGDEGISGLPGFPGAPGFPGLERDGMGPGGSPGIPGVKGEMGEP
GRATVGLPGTPGRDGLPGLPGAPGLPGSARPSFLPDAILDGRTGAPGEPGQRGLPGALGP
KGYKGDAGDCACDGGVTRAGLKGISGPQGLPGSRGLPGIKGVSGDPGTVGAPGLRGPLAP
AGQQGLPGLKGEKGDSSYATGRGAPGDRGAEAPRGPSGFPGTPGRDGLPGLPGPPGPPGD
GGLGFPGEKGLPGLPGSKGRPGEIGSPGIGYPGPAGLRGPPGDPGMDGFPGQAGLPGPPG
ITLPCIVPGAYGPPGTPGLPGLPGPKGSKGFPGIPGQPGLHGSKGQPGSPGIIGLQGEPG
FPGPRGEQGSQGLPGLDGADGLPGKMGASGLAGTKGAPGDVFGAESGTQGERGRPGLPGD
KGLAGDLGFPGPKGLDGRPGLLGIKGELGNPGYSGVPGLRGPPGLGGPFGIKGKPGPLGS
VGLAGAPGCQGLPGVKGLTGDVGPQGPAGMKGFPGLDGAPGPSGERGFLGPPGPFGQDGR
PGFSGPKGEKGSSGLLGFPGMPGLPGVPGVNGFKGTPGTVGEKGSPGVLGLQGQKGDRGD
VGPPGLPVLGAPEQALQLKGDKGDPGLAGLGGFPGPRGDKGIPGSRGQPGLPGPVGSASR
ERGFHGDQGFPGPSGQPGLPGQKGTRGIAGFPGMPGERGSDGITGTLGFPGPIGLPGPKG
DQGESAGVPGTAGVKGERGDPGFPGERGREGLKGEPGYPGSTGVNGLKGGPGDLGQEGPA
GIPGSAGLRGISGPPGPPGQPGSVGFPGARGTAGPKGFHGFPGLNGLNGLPGTKGSPGTP
GLSEVGLKGPAGLPGLKGEEGSPGLGRGAVGFPGPKGSSGDMGPPGPVGLPGLPGTPGIS
LPSDIRGRPGDAGHPGLDGSSGLPGPPGPRGPPGPASDQGDTGNPGFPGVPGLRGVKGDV
GPTGPIGLPGVSGFKGVRGEPGLMGMPGKDGPPGDPGYPGLKGEMGRRGLPGQPGAPGVT
PQVEEITAPAGLPGLPGIDGVPGFDGDPGFQGPVGKPGAKGLPGRPGLKGRDGLPGSPGI
AGDPGPLGAPGPQGFEGAAGKPGALGLPGMPGRSVGVGYTLVKHSQSDQIPPCPIGMNKL
WDGYSLLYVEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYWLSTTA
PIPMMPVDSTQIPQYISRCSVCEAPSQAVAVHSQDITIPQCPLGWRSLWIGYSFLMHTAA
GAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEQSQQFVGAPPS
ETLKAGQLRTRVSRCQVCMKNL
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atgggcccggccccggggcgcgcaggggcgctgctgctgctgccggtgctgctgctgtgc
ctgagcgccgagccggcgagcgcgggtgggaagaagtcttacagcgggccatgtggagga
cgcgattgcagcgctggatgcaaatgtttcccagagaagggcgcgaggggtcgaccggga
ccaattgggattcaaggaccgataggtgctcctggatttactggtccagaaggtttacca
ggagcaaaaggagagagaggagcagcgggcccccccggaccagctgggcacaaaggtaac
aagggttcaatgggagttccaggatttcaaggcatcaacgggatcccaggtcaccctggc
cagtctggacccaggggtccacctggcctcgatggctgcaatggaaccattgggagtcct
ggtgtttctggacaagatggatttcctggcatacctgggctgccaggtcgtcctggccca
aaaggacttaaaggagaacctgtttttgctcaaggcagccttaaaggaatgaagggagaa
aatggtcttcctggattggacggtatttctggccccaaaggttttccaggtccaacaggt
tctgcaggccctataggattaccaggtttgcaaggtccagtgggtccccctgggccacca
ggtccgaaaggtaatatgggattaggctttcaaggagagaaaggagaaaaaggcgatgta
ggactgcctggccctccgggcccccctccatctactggaatactagaattcatgggtttc
ccaaagggaaaacaaggagaaaagggtgagccaggccctcgaggattgcctggagacaaa
ggattgcctggcctgccgggctttggcggtgttggagaaaaaggagaaaaaggtgtgcct
ggtttgccaggcggcaggggtcttttgggactggatggatccaacggcattccagggaga
aagggtcatccaggtattccaggctatccaggactggatggagttgaaggcacgaagggt
gaagtaggtgacattggtcccccaggccctcctattgttgttgacaaggaaggtgtagtc
atttcaggtgccccaggtgaccctggaaacccaggaatacctggtcctccaggagatgaa
gggatcagtggtctaccaggctttccaggagctccagggtttccaggcctggagagagat
ggaatgggccctggagggtctccaggtattccaggtgtgaagggtgaaatgggagaacca
ggaagagcaacagttggattaccaggcactccaggaagagatggtttacctggtctgcca
ggagcaccaggattgcctggttctgcacgcccttcattcctcccagatgcaatcctggat
ggaaggactggtgccccaggggagcctggacaaagagggcttccaggagctttgggtcca
aaaggttacaaaggagatgcaggtgattgtgcttgtgatggaggagttacaagagcaggt
ctaaaaggcatctcaggtccacagggtctaccaggaagtcgtggtttgcctgggattaaa
ggtgttagtggagacccaggcactgtgggtgcaccaggactgcggggccctctggctcca
gctggccagcaaggtcttccaggccttaagggagaaaaaggcgattcatcctatgcaaca
ggcagaggtgctcctggggaccgtggtgcagaggcaccccgaggaccatcaggcttccca
ggaactcctggcagggatggacttccaggtttgccaggcccaccaggtccaccaggtgat
ggtgggctaggcttcccaggggaaaaaggtctaccaggattacccggctccaagggccgt
cctggagagattggttctcctggcattggatatccaggtcctgctggacttcgtgggcca
ccaggtgacccagggatggatggttttccaggacaagcaggtctgccaggccctccaggt
atcaccttgccctgcatagttcctggagcatatggtccccccgggactcccggccttcca
ggattgccaggtcccaaaggcagcaaaggctttcctggcattccaggacaacctggatta
catgggtcaaaaggacagccagggtctccaggaataattggcttgcaaggggaacctggc
ttccctggacctcgaggagagcaaggatcacaaggacttccaggattggacggggcagat
ggtttgcctgggaagatgggtgcttctggcttagctggaactaaaggagctcctggagat
gtatttggtgctgagagtggaacccagggagagcgtggccgacctgggctcccaggggat
aaagggcttgcaggtgatcttgggtttccaggaccaaaagggctggatgggcgaccaggc
ctcctaggtattaaaggcgagctgggtaatccaggatattcgggtgtccccggattgcgg
ggacctcctggtcttggaggtccttttggcattaagggaaaaccaggaccactgggatca
gttggccttgcaggagcaccaggctgtcaaggacttcctggagtcaaaggattgactggg
gatgtaggtcctcaaggccctgctggtatgaaaggcttcccaggtcttgatggtgctcca
ggaccttctggggaaagaggattcttaggaccacctggaccttttggccaagatggacgc
ccaggtttttctggaccgaaaggtgaaaaggggtcttctggcctacttggtttcccaggc
atgccaggcctgcctggtgtccctggggtgaatgggtttaaaggaactcctggcacagta
ggagaaaaaggaagccctggagttctgggactccaaggtcaaaaaggtgacagaggtgat
gtaggtccacctggtcttcctgttcttggggctccagaacaggcactgcaattgaaagga
gacaaaggagatcctggattagctggacttggaggattcccaggacccagaggtgataaa
ggaatcccaggaagccgtggacagcctggtcttcctggacctgttgggtcagcaagcaga
gagagaggttttcatggtgaccaaggtttccctggtccatctggacagcctgggctgcca
ggacagaagggtacacgtggtatcgcaggatttccaggaatgccaggagagaggggttca
gatggtatcacaggaacacttggattcccaggacctattggcctccctggcccaaagggt
gaccagggagagtctgctggcgttcctggcactgctggagttaaaggagagcgaggggac
ccaggattcccaggagagagagggagagaaggactcaagggtgaaccaggctacccagga
agcactggagtgaatgggctcaaaggtggcccaggagatcttggccaagaaggaccggca
ggaatccctggaagtgctgggctacgagggatctctgggccaccagggcctccagggcag
ccaggatctgttggattcccaggagctcgtggaacggcaggaccaaaagggtttcacgga
tttccaggtttaaatggtctgaatggcttgccaggcacaaaagggtctcctgggacacca
ggtctgagtgaagttggactgaaaggccctgcgggtcttcctggtctgaagggtgaggaa
ggttctccgggcttgggcagaggagctgtaggattcccaggaccaaaaggctcatcagga
gacatgggtcccccgggtcctgtggggctgcctggcttgccaggaactcctggaatttct
cttccttctgatatacgtgggagacctggggatgctggccatccagggcttgatgggagt
tcaggtcttccaggtcctccgggaccacgagggccccctggaccagcttctgaccaaggt
gacacaggcaatccgggtttccctggtgtccctggcttgcgaggtgttaagggcgatgtg
ggacctactggtcccattggactccctggcgtatctggattcaaaggtgtcagaggtgag
cctggtcttatggggatgccaggtaaagatgggcctccgggggatcctggttaccctggg
ctgaaaggtgaaatgggacgtcgaggtctccctggccaaccaggggctccaggtgtaacc
ccacaggtggaagaaatcacagcccctgcaggcctgccaggtctgccagggattgatggt
gtccctggctttgatggagatcctggattccagggcccagttggaaagccaggtgcaaag
ggtctgccaggcagacctggtttgaaaggacgtgatggtttacctggatcgcctggcata
gctggtgacccgggacctttgggtgccccgggaccacagggatttgaaggtgccgctgga
aagccaggcgcacttggcttgccgggaatgcctggtcgcagtgtgggtgtcgggtacacc
ttagtgaagcacagccagtcagaccaaatcccaccttgtcccattggaatgaacaagctc
tgggatgggtacagcttattgtacgtggaggggcaggaaaaatcacacaatcaggatctc
ggttttgctggctcatgtttgccccgcttcagcactatgccttttatttactgcaacatc
aatgaagtgtgctactacgccagccgaaacgacaagtcctactggctctccaccaccgct
cccatccccatgatgccagtggacagcactcagatcccacagtacatcagtcgttgctcc
gtgtgcgaagcaccttcccaggctgtggcggtgcacagccaggatatcaccatcccacag
tgtcccctcggttggcgcagcctctggataggatactccttcctaatgcacacagcagct
ggtgcagagggtggaggtcagtcccttgtctcacctggttcttgcctggaggatttccgt
gctacgcccttcattgaatgcaatggtgctaggggaacgtgccactacttcgcaaacaag
tacagcttctggctgaccacggttgagcagtcgcagcagtttgtcggtgctcctccctcc
gaaactctgaaagcaggacagctgcggacaagggtcagccgctgccaggtgtgcatgaag
aacttgtaa
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