Numida meleagris (helmeted guineafowl): 110403882 Help Entry 110403882         CDS       T06015                                  Symbol SPG11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism nmel  Numida meleagris (helmeted guineafowl) Brite KEGG Orthology (KO) [BR:nmel00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:nmel03400]     110403882 (SPG11) DNA repair and recombination proteins [BR:nmel03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      110403882 (SPG11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C Kbp-5 Motif Other DBs NCBI-GeneID:  110403882 NCBI-ProteinID:  XP_021263304 LinkDB All DBs Position 9:19503810..19532823 Genome browser AA seq 2427 aa AA seqDB search MAGARRELRVLLAASPGQARGSPRDAARARLSAGQDALGSLLLREGIYLESLGPGGGGRA RGGVLPGAWADFLWENTEEHDPQANKTKILALSESHELFVYEFTREDGTCNPISLHSCKE DTLRKLLEANNISLSSILSLRILSFKDNKCILLLNNFIVMHLTFPGERSSLETCGCFTLD LPPPVLERITDTSFCRGILFFLDSSGWIYVFDSFDGANLANIDVALCQGGVRDGDRSSTV ASPLTALKVSYDLSVAVIISSSNRACSVDLNVYFRQFPGHLICKRDPESLPLKPPEGVDE DDLASSDYSMELLSSPFRTDRSWRAHLSSLRSTIRRRKSRSPHLMHDVNLPWYQYFTHLE DHDPLICETSEKALAVAPKAFPRVLSKPLQSAGTRLGDTGQQWKQILPIQLSQEVVKLEC KSVTEAKALFVLLTDDKALTLALWDFESQDVTYYQFGQGSVYVDCNEEVPLCLLLTERGL SLILFGLTQEEFLNRLMIYGSAGVVDSVCHLNGWGRCSIPVHALEAGLENRQLDTVDLFL KSRESLFNLSALCSEPQHSADGASRSFLKNLQELRPALNLLSSAIRENDMEPQSKHFSEQ LLNLTLTFLSKQLEEIFVHTEEPDEYLQKAADILTDYIIELRTFMKNYPRSQVNITNVGS DSDEDLPAIEESQKWEKLTPEEVIAEAILSNKMPEAQTFFRMHQHPAQSLQELIRTGLNL VYERLLKGNTREASALLRNMGFDVKQQLHKICFYTVDKRVRDLLVKVLQEENYFSEKEKK MIDFVHQVESLYSESFQENKEMQSLSSAKNWRKEQDFSEHSAVLDSLMDRDRRQVPSREV TVMFDWAQWWDELVQDMILLPRKKSQGLATCNPEALWMHLTAQHDWLSISSWIEEFEPSH PLCGQAKWPPLTANIADRNTLCSGYMRNDILNKLARNGIFVLSELEDFELLLQRLVHVGG VLQNPHPVPKYSAASGLDFHARFVLHCLEHNLQYMLYTYLDYYSLTPSNCPILDDKELHE AHPWFEFLVQCRGVASNPRDPKMIFQASLANAQILIPSNQASVSSMLLEGRTLLALATTM YAPGGVDQVLQNEDTEKPLKKVDPQLLKMALTPYPKLKAALFPPCTSHGILPPDISLYHL VQSLVPFDPSKLFGWQSTNTLAVSDASSDFPHFSSPDLVNKYAVMERLDFLYYLRHGRPS FAFGTFLVQQLVKSKSPKQSIQQAGSEAYLLGLSFFNVPSVAVACVCFLELLGLSSLKLR IDIKAANMIFSYKTRNEESQHDQIRESLVEQLMRLADGEKAATEEVLISLEEAFWDSIEH QGIKKTSSDSRRQWSLVVQFCKLHSTKLSTSYLEECAKCNDWLQFIIQTQLYSYKPEEVT SVLEGFAPILQDHLMLALEKSPLLSPAEGSAAHVFRSRHAGSLFQILFQCQESSSASCHL LAEGLREHAPVLSVLAACFPDADIIHCLCVWIITSVDNVTRSEATKHIQSSAENHKWDLH DLSLIWKVFLRKQKCQTLRRGFQLFLKDSPLLLVLEMYDLCMNCKKYSEAKTKLDEFQKH LMNLKAAEGPAASQLPVQWLESQALFLLELMMQQCRTEYELGKLLQLFAATDNLLLDGPY VKKLCALSEILKDSSVAMNRSILSSSTAAAFQNECRSILEQLQEKGMFSLAREVAELAEL PADSVVTREILRDLHLLRDTGEWHQNQIRIKFWKKCNDSFMKNSISSKAASDFFLNQANL VFESSVHEKINSIAERHLLLTLAGHWLAKDVTVALDKLEEIEKQIWVCRITQQTLSTDEG PSKSGRSSCAAANGDFTFDSLAKEFSFSKLPALNTPNYLNVEGLEFRESQQTLAEDEEES LRFLVGCLLDEGSVHEASRLCRYFHFYSRDVSLVLHCRALASGEADPDKLHPDIQTLLVA VEKKTQESGAAQQSRVPSTSSLEDWTHIAAPSPDDPVVVSLKALTDECVHGRNYCRQVLC LYELSKELSCSYSEMSALDPDKVLRAILSSQQPERCRKAQAFITTQGMQPGTVAELVAKE VVQELLASSEGRGQKQVSSPAAEGQAFLQLAKLCQDPTLLGMKLLDKISSVPRGELSCIT ELLILAHNCFSLTCHMEGITRVLQAARLLTDEHLAPNDEYGLMVRLLTGIGRYNEMTYIF ELLHEKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNMIALCFSMCREIGENHE AAACTQLKLIESQPWEESLQDVANLKKLLMKALTLFIDAAESYSKDSCVRQALRCSRLTK LITLQLHFLSSGQSTMLINRSRQNLMECIVSLPRFYQAAVVAEAYDFVPDWAEVLYQQVI AKGDFNYLEEFKQQRLLKPALFEEIAKKFKQHPATDAALRNLKKLLAYCEDISTYYRLAY DNKFYDVVNMLLKDAQTGCCLQDLLSC NT seq 7284 nt NT seq  +upstreamnt  +downstreamnt atggcgggggcgaggcgggagctgcgcgtgctgctggcggccagcccgggccaggcgcgg ggctccccgcgggacgcggcgcgagcccggctgagcgcggggcaggacgccctgggcagc ctgctgctccgtgaggggatctatctggagtccctggggccgggcggaggcggccgggcg cggggcggcgtcctgccgggagcgtgggccgacttcctgtgggagaatacggaagagcat gatccacaagcaaacaagacaaaaatactggctctgagtgaaagtcacgaactgtttgtc tatgaattcactagagaagatggaacgtgcaacccgatttccctgcacagttgtaaggaa gatacactgagaaagctcctcgaggctaacaatattagtctgtcttcaattttgtctttg aggatactgtcttttaaagacaacaaatgcatacttctgctcaacaactttattgttatg caccttacctttcctggagagcgttcatcattggagacatgtggctgctttacccttgat ttgcctccgccagttttggaaagaataacggacacaagcttctgcagggggattctgttt ttcttagacagttctggttggatttacgtatttgattctttcgatggtgcaaatctagca aatatcgacgtggcgctctgccagggaggcgtgcgggatggggacaggagttccaccgtc gcgtcaccgctcactgcactaaaggtgtcctacgatctcagtgttgctgtgatcatcagt tcttccaaccgtgcctgttctgtggatctaaacgtgtacttcagacagttccctgggcat ttgatttgtaaaagagatcctgaaagtcttcccctgaagccacctgaaggagttgatgag gatgaccttgctagttctgactacagtatggagcttttgtcgtcgcctttccgcacagac aggtcgtggagggcacacttatcctcactgcgcagcacaatcaggagaagaaaatcgcgt tccccacatttgatgcatgatgtgaacttaccttggtatcagtatttcacccatcttgaa gatcacgatcccttaatctgtgaaacttctgagaaggcgctggccgttgctccgaaggct tttccccgtgtcctctccaaaccgctgcagagcgctgggacaaggctcggtgatacaggg cagcagtggaaacaaatcctccccatacaattatcacaagaagtggtgaaactggagtgt aaatctgtgactgaagctaaagcactgtttgtgctactaacggatgacaaagcactgaca cttgctctctgggattttgagtcccaggatgtaacttattaccagtttggccaaggcagt gtttatgtggattgtaatgaagaggtgccattatgtctgcttctgacagagcgtggcctc tccttaattctgtttggtttaactcaagaggagtttttgaatagactgatgatctatggc agcgctggagtcgtagactctgtatgtcacctcaatggatggggacggtgttcgattcca gtacatgcactagaggctggcttggaaaaccggcagctagacacagtagacttattctta aaaagcagagaaagtcttttcaatctttctgcactctgctccgaaccccagcattctgct gatggcgcgtcccggtcttttctgaaaaatttgcaggagctgagaccagctttaaacttg ctttcctcggcaatcagagagaatgacatggagcctcagagtaagcacttttcagagcag ctgctgaacctcacattgactttccttagcaagcaacttgaagaaatttttgtccacaca gaggaacctgatgaatacctgcagaaggctgcagatattttaactgattacattattgaa cttaggacgtttatgaaaaactatcctcggtcacaagtcaacatcacaaatgtaggaagc gattctgatgaagacctgcctgcaatagaagaaagccagaagtgggaaaaactgacacct gaggaagtaattgctgaggccatcttaagcaacaaaatgccagaggcccagaccttcttc cgaatgcaccagcatcctgctcagagtctccaggaactgattcggacgggtttgaatctg gtctatgagcgacttctgaagggcaataccagagaggcctccgcacttctgagaaacatg ggttttgatgtgaagcagcaattgcataagatatgtttctacacggttgataagcgtgta cgagatttgctggtgaaagttttacaagaagaaaattatttttctgaaaaagagaagaaa atgatagactttgtgcatcaggttgaaagcttgtactcggagtccttccaagaaaataaa gagatgcaatctctttccagtgcaaagaactggagaaaggaacaagacttttccgaacat tcagccgtgctagactcactgatggatcgtgatagacggcaggttcccagcagggaggtc acagtgatgtttgactgggctcagtggtgggatgagctcgttcaggatatgattcttctc cccagaaaaaaaagccaaggacttgccacgtgtaatcctgaggctctttggatgcacctg acagcccagcacgattggcttagtatcagttcatggattgaagaatttgagcccagccac cctttgtgtggacaagctaagtggccgcccctgactgcaaacattgctgaccgaaacacg ttgtgcagtggctacatgagaaatgatatattgaacaagctggctagaaatgggattttt gtcctttctgaattggaagattttgaacttctgctccaaagattggttcacgtcggagga gttctgcagaatcctcaccctgttccaaaatacagtgctgcaagtggcttggacttccac gctcgttttgtccttcactgcttagaacataatttgcagtatatgttgtacacgtacctg gattattacagtttaactccttccaactgccctattttggatgacaaggaactgcatgaa gcacatccctggtttgaattcctcgtgcagtgtcgaggggtggccagtaacccacgagat ccaaagatgatttttcaggctagtctagcgaatgctcagatcttgattcctagtaatcaa gccagcgtgagtagcatgctcctggaaggacggacactgctagcacttgctaccacgatg tatgcacctggaggcgttgatcaggttcttcagaatgaagatacggagaaacctttaaag aaagttgatcctcagctcttaaaaatggcattgactccttaccccaagctcaaagctgct ctctttcccccatgtacctctcatggaattttgccacctgacatctctctttaccatctt gttcagtcattagtgccctttgatcccagtaaattatttggctggcagtcaacgaatacc cttgctgtgtcagatgcatcaagtgactttcctcatttttcatcccctgacctggtgaac aaatacgctgtaatggagcgactggatttcctgtactatttgcgccatggacgcccatcg tttgcctttggtacatttttggtccagcagttagtgaagagcaaaagccccaaacagtcg attcagcaagcaggaagtgaagcctatcttctaggcctttctttcttcaatgtgccttca gtagctgttgcctgcgtgtgttttctggaactgcttgggctcagcagcctcaaactgcga attgatattaaggctgcaaacatgatattcagttacaaaaccagaaatgaagaatctcag cacgatcaaataagagaatctttggttgaacagttaatgaggttggctgatggtgaaaaa gcagcaacagaagaagttcttatctccttggaagaagccttttgggattcaattgagcat caaggaataaagaagacgtccagtgactccagacggcagtggtctttggtggtgcagttc tgcaaactccactccaccaaactgagcacctcgtacctggaggaatgtgctaaatgcaat gactggctgcagttcatcatccaaacccagctgtacagctacaagccagaggaggtcact tctgtcctcgaaggcttcgctcccattttacaagatcacttgatgctggcactggagaag tcaccgcttctgagtcctgctgagggcagtgctgcccacgtgttcaggagcagacacgca ggcagtctcttccaaatccttttccagtgtcaggagagctccagtgcttcgtgtcacctt ttggctgaagggctgagggaacatgcccctgttctgagtgttttagcagcgtgtttccca gacgctgacattattcattgtctttgtgtctggataattaccagtgtggataatgttacc agatctgaagcaacaaaacatattcaaagctcagcagaaaatcacaagtgggatcttcat gacctatcacttatctggaaagtgtttttaaggaagcaaaaatgtcaaacgcttagaagg ggattccagctctttttgaaggattcccctttactgcttgtactggagatgtatgatctg tgcatgaactgtaaaaaatacagcgaagctaaaaccaaactggacgagtttcagaaacat ctcatgaatcttaaagccgccgagggaccagcagcttcccagctccctgtgcaatggctg gaatcgcaagcactgtttcttctggaattgatgatgcagcagtgcaggacagaatacgaa ttaggaaagctcttacagctgtttgctgctacggataatcttctccttgatggcccttat gtgaagaaactctgtgcgctcagtgagatcctgaaggattcctccgtggccatgaatcgc tccatcctgagcagctccaccgcagcagcgtttcagaatgagtgcagatcgattctggag cagctccaggagaagggaatgttctcgctggctcgggaggtggcagaactggctgaattg cctgcggacagcgtggttacccgagagattctaagagacctacatcttttaagagacacg ggagagtggcatcaaaatcagatacgaattaaattctggaagaaatgtaatgacagcttc atgaaaaattcaatctccagcaaagctgcctcagatttctttttgaatcaagcaaatctg gtgtttgaatcttcagttcatgagaagataaacagcattgcagagagacatttgctgctt actttggctggccattggctagccaaggacgtcacagtggcactggacaaattagaagaa atagagaaacagatctgggtttgtcgcatcacgcaacaaacgttgtccacagatgagggg ccaagcaagtcgggacgttcctcctgtgctgcagcgaatggagattttacttttgatagc ttggctaaggaattttccttctcaaagctacctgctctgaacacaccaaactacttaaac gtagagggtctggaattcagggagtctcagcagaccttggctgaggatgaggaggaatcg ctcaggtttctggttgggtgcctcctcgatgaaggcagcgtgcatgaagccagccgcctt tgtcgatatttccatttctacagcagagatgtttcgctggtattgcactgcagggctctg gcctcgggggaggctgatccagacaaactgcacccagatattcagactcttcttgtagca gtagagaagaagacacaggaaagcggtgcagcgcagcaaagcagagttcccagcacatca agcttggaggactggacgcacatcgcagctccatctccggatgatccagtcgttgtcagt ctgaaggctctcacagatgagtgtgtccatgggagaaactactgcagacaggttctctgt ctgtatgaactttctaaggaactgagctgctcctacagtgaaatgtcagccctggaccct gacaaagtgctgcgagcaattctgtcatcccagcagccagagcgctgcaggaaggcgcag gcgttcatcaccacgcagggcatgcagcctgggactgtggcagagctggtggccaaagaa gtcgtgcaggagctgctggcatcttcagaaggaagaggacagaagcaggtttcaagccct gcagctgagggccaggcgttcctgcagctcgccaagctgtgccaggatcccacgctgctc ggcatgaagttgctggataaaatttcctctgtaccacgtggggaactgtcatgcattaca gagctgctgattttggcccacaactgcttcagtctgacttgccacatggaagggatcacc agggtcctccaggcagcgcggcttctcacggatgagcacctggcacctaacgatgagtac ggactgatggttcgtctcctcactgggattggcagatacaatgagatgacctacatattt gagctgctgcacgagaaacattactttgaagtgctcatgagaaaaaagttagacccgagt gggacgctgaagacggctctgctggattacatcaagcgctgccgccccggggacagtgag aagcacaacatgattgccctttgcttcagcatgtgccgagaaatcggagagaatcatgag gctgctgcttgcacacagctgaaactcattgaatctcagccgtgggaggagtctcttcaa gatgttgcaaacttaaagaaactgctgatgaaagctctgactctcttcattgacgcagca gaaagttactctaaggactcctgtgtccgccaggccctgcgctgcagccgcctcacgaag ctgataactctgcagctgcattttctgagcagcggtcagagcacgatgctgataaaccgg agcaggcagaacctgatggagtgcatcgtgtccttgcctagattctatcaagcggctgtt gtggccgaggcttatgacttcgttcccgattgggctgaagttctgtaccagcaagtgatc gctaagggagacttcaattacctagaagaatttaaacaacagaggctactgaagcctgcc ctgtttgaggagatcgcgaagaaatttaagcagcacccagctaccgacgccgccctgagg aatctgaagaagttgcttgcttactgcgaggacatctccacgtactacaggctggcgtac gacaacaagttctacgacgtggtcaatatgctgctgaaggacgcgcagaccggctgctgc cttcaggacctgttgtcctgctag

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