Numida meleagris (helmeted guineafowl): 110404187
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Entry
110404187 CDS
T06015
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110404187 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmel03019
]
110404187 (CNOT1)
Messenger RNA biogenesis [BR:
nmel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110404187 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110404187 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
110404187
NCBI-ProteinID:
XP_021263903
LinkDB
All DBs
Position
10:complement(1398011..1451108)
Genome browser
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLHIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHAVTTDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLSQPTFQQSKMKPSDLSQVWPEANQNF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCMTELE
QHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADVFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDIRQSEFQQLPYHRVFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELSKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQ
LINALVLHVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaacaggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacaaaaccgaactttatctcgacgctgtcctacgccattgacaatccgttgcac
tatcagaagagtctaaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtgatatttggtctcgctttactgaactctttcagctcagat
ctacgaggttttgctgcccagttcatcaaacagaaactcccggatcttttacgctcttac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctttttgggcagaagggagcttttggggtaggacag
gaacagattgacgctttcctcaaaacattacgtagagattttccccaggagcgttgcccc
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaacaatgatggagagttctctggcagactttatgcaa
gaagttggctatggcttttgtacaagcgttgaagaatgtcgcaacataatcatgcagttt
ggcgttcgggaggtgacggctgcccaggttgcccgggttttggggatgatggctcgaact
cattcggggctgacggatggtattccattgcaatctatttcggctcctggcagtgggatt
tggagtgatgggaaagataaaagcgatggagcacaagcccatacctggaatgtggaggtc
ttaattgatgttcttaaagagctgaatcctagcctggacttcaaagtagtaacctatgaa
ttggaccacccgggatttcagattcgtgacagcaagggcctgcatattgtggtgtttggc
atccagagagggctaggcatggaagtttttccagttaatgccatatacagaccttggaag
catgcagagggccagctctccttcattcaacattccctcataaacccggacatcttttgt
tttgctgactacccttgtcatgctgttaccacagacatcctgaaagcaccacccgaggat
gacaatcgagaaattgctacatggaagagcctggatttgatcgaatctctgttacggttg
gcagaagtgggacagtatgagcaggttaagcagctcttcagtttccccatcaagcattgc
ccagatatgttggtattggccttattgcagatcaatacttcctggcataccttgcgccat
gaactcatctccacgctcatgccaatcttccttggcaaccatcccaactctgccatcatt
ttgcactatgcatggcacgggcagggtcagtctccttcgattcgccagcttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtatgaccaggcaaaattgtcacgtatt
cttgatgtggcgcaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgtaattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagacaaaattcgggagcatggggagcccttcatccaagcctgcatgaccttctta
aagagaagatgtccatctatcctaggcggccttgctccagaaaaagatcaacccaaaagt
gctcagcttcctccagaaactttggcaactatgttggcgtgtctgcaagcttgtgctggg
agtgtttctcaggagctgtcagagaccatcctcaccatggtagccaactgcagtaatgtc
atgaacaaggccagacagcccccacctggagtcatgcccaaaggccgcccacccagcgcg
agcagcttggatgccatctctcctgtgcagatcgactcgcttgcgggaatggcgtctctt
agtttaggtggctcggctgctcctcacacccagagcatgcaaggcttccctccaaacttg
ggctctgcgttcagtactcctcagtcaccagcaaaagcatttcctcctctttccacccaa
aaccagacgacaggtttcagtggcattggaggactctcttcacagcttccagtaggtggt
cttactacgggtagcctgactggcataggaactggagccctgggccttcctgcagtgaac
aatgatccattcgtgcaaaggaagctgagcacatctggactgagccagcctacgttccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaatcagaacttc
agcaaagaaatagatgatgaggcaaacagctacttccagcgtatctataaccatccacca
catccaaccatgtctgtagatgaggtcttggagatgctgcagaggtttaaggactccaac
attaaacgggaacgagaagtgtttaactgcatgctgaggaacttgtttgaggaataccgt
ttctttccccagtacccagataaagagctgcacataacagcctgcctctttggtgggata
atagagaaaggactggttacttacatggcattgggcctggcccttcgctacgttcttgaa
gccttacggaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagactgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttccctcatcacttgcaggagtacatagaatatggacagcagtctagagat
cctcctgtgaaaatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaagttccagcaaaagctcctcttgctggccaagtcagcactatagta
accacctcaaccaccaccactgttgcaaaaaccatcacaatcactcgaccaactggagtc
agcttcaagaaagatgtgccgccttccattaatactaccaacattgatacgctgttagta
gcaacggatcaaactgagagaattgtagaacctccagaaaacgtccaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaacatgacacagaaggttgaagaactgaaggaa
acagtgaaagaagagttcatgccctgggtatcacagtatctcgtgatgaagagagtcagt
attgagccaaattttcacagcttatattcaaacttccttgacactcttaagaatccagaa
tttaataaaatggttctgaatgaaacttacagaaatatcaaggtgctactgacatcagat
aaggctgcagccaacttctccgaccgttccttgttaaagaaccttggtcactggctgggg
atgattacactggctaaaaacaagcccatcttgcacacggatttggatgtgaagtcacta
ctactggaagcatatgttaagggacagcaggaattgctttatgtagtaccatttgttgcc
aaagtcttagaatccagtgtcaggagtgtggtcttcaggcctccaaacccatggacaatg
gccattatgaatgttttagctgagctgcatcaagaacatgatctaaaattgaatctgaag
tttgagatcgaagtgctctgcaagaatcttgccctggacatcaatgagctgaaacctgga
agtctcctgaaagataaggatcgtctgaaaaacctggatgagcagctgtctgctccgaaa
aaagacgtgaagcagccagaagagctaccacccatcacaaccaccactgcttctacaact
ccagctaccagcaccacttgtacagccacggttcctccacagcctcagtacagttaccac
gacatcaatgtctattccttaggagggttggctccacacattaccttaaatccaacgatc
ccgctgttccaggcccacccccagctgaagcagtgtgtgcggcaggctatagagcgagcg
gtgcaggagctcgtgcacccggtggtcgatcggtccatcaagattgccatgactacctgt
gagcagatagtcaggaaggacttcgcgctggattcagaggagtcgcgaatgcgtgtggct
gcgcaccacatgatgcggaacctgactgctgggatggccatgatcacctgcagggagcct
ttgctcatgagcatagctaccaacttgaagaacagtttcgctactgcactgagggcagcc
tccccacaacagagggacatgatggagcaagcagctgcccagctagcgcaggataactgt
gagctggcatgctgctttatccagaagacagctgtggaaaaagcaggccctgaaatggac
aagaggctggcaactgaatttgagctcagaaaacatgctagacaagagggccgtcggtac
tgtgatcctgttgtgttaacttaccaagctgaacggatgccagaacagatcaggttaaag
gttggaggtgtggacccaaaacagctggctgtttacgaagagtttgcacgcaacgtcccc
ggcttcttgcctaccaatgacttgactcagcctacaggattcttggctcaacctatgaag
caagcttgggccactgatgatgtagcacaaatctatgacaaatgcatgacagaactggag
cagcacctgcagtccattccccatactctggccatgaatcctcaagctcaagcattacgc
agcctgctggaggctgtggtggtagctcggaactcccgtgatgccattgcagctcttgga
ctgctgcagaaggctgtagagggcttactggatgccaccagtggggcagatgctgacctc
ctgcttcgctaccgcgagtgtcacctgctggtgctgaaggctctgcaggacggccgtgca
tatggatctccgtggtgtaacaagcagattactaggtgcctgattgaatgtagagatgag
tacaagtacaatgtggaagctgtggagctgctaatccgcaatcacctggttaacatgcag
cagtacgatcttcacctggctcagtccatggagaacggcttgaactatatggctgtggca
tttgccatgcagttggtgaagatccttctggtggatgagagaagtgtcgcccatgtaaca
gaggcagatgtgttccacacgatagagacgctcatgaggattaacgctcattccagaggg
aatgccccagaaggattaccccagttgatggaagtggtccgatcaaactacgaagcaatg
attgaccgtgctcacggaggtcccaatttcatgatgcattctggaatttcccaagcctct
gagtatgatgatccgccaggtctgagggagaaggcagaatacctgctgagggagtgggtg
aacctctaccattcagctgcagcgggccgcgacagtaccaaagcgttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccagcaagggatcctgaaaacagatgac
ctgatcacccgctttttccggctttgcactgaaatgtgcgttgaaatcagctatcgtgct
caggctgagcaacagcacaaccctgctgccaaccccactatgatccgagccaagtgctac
cacaatctggatgcctttgtgcggctcattgcactgctggtgaagcactctggagaagca
accaacaccgttacgaagatcaacctcctgaacaaggttcttggtattgtggtgggagtt
cttctgcaagaccatgacattcggcagagtgagtttcagcagcttccttaccatcgtgtt
ttcatcatgttgctgttggaattaaatgctcctgagcatgtgttggagaccatcaacttc
cagacactcacagctttctgtaacacatttcacatcctgaggcctacaaaagctccaggt
tttgtttatgcctggctggaactgatctcccaccggatatttattgcaagaatgctggca
catacaccacagcagaagggttggcctatgtatgcccagttattgatcgatcttttcaag
tacttggctcctttcctcagaaatgtggaactcagcaaacctatgcaaattctttacaag
ggcactctacgtgtgttgctggtcctattgcacgatttcccagaatttctttgtgactac
cattatgggttctgcgatgtcatcccacctaactgtattcagctaaggaatctgatcctg
agtgccttcccacggaacatgaggcttccagaccctttcacccccaatctaaaggtggac
atgttgagtgaaattaatatcgctccacgaatactcaccaatttcactggagtgatgccg
cctcagttcaagaaagacttggattcctatctcaaaacccgttctccagtcacttttctg
tctgacttgcgcagcaacttacaagtatcaaacgaacctggcaaccgctacaacatccag
ctgattaatgcactggtgctccacgtcggtactcaggctattgcgcacatccacaacaaa
ggcagcacgccctccatgagcaccattacccactcagcacatatggacatcttccagaat
ttggcagtggacctggacaccgaaggtcggtacctcttcttgaatgcaattgccaaccag
ctgcgataccccaacagtcatacccactacttcagctgcaccatgctttacctgtttgca
gaggccaacactgaggctatccaggagcagatcacaagggttctcttggaacgactgatt
gtaaataggcctcatccctggggactccttattactttcatcgagctgataaaaaaccca
gcatttaagttctggaaccatgaatttgttcactgtgctccagaaattgaaaagttgttc
cagtcggttgcacagtgctgcatggggcagaagcaagcccagcaagtaatggaggggact
ggtgccagttag
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integrated database retrieval system