Numida meleagris (helmeted guineafowl): 110404824
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Entry
110404824 CDS
T06015
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nmel04121
]
110404824 (PDZRN3)
Enzymes [BR:
nmel01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110404824 (PDZRN3)
Ubiquitin system [BR:
nmel04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
110404824 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Sina_ZnF
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-TRAF
Prok-RING_4
PDZ_Tricorn
zf-rbx1
U-box
RING_XB3-XBAT31
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
110404824
NCBI-ProteinID:
XP_021265224
LinkDB
All DBs
Position
11:complement(16638812..16762984)
Genome browser
AA seq
1060 aa
AA seq
DB search
MGFELDRFSGEVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPANCQRIS
AKELNHVLPLKSLILKLDIKCDNHARGCEAVVPLQHLGEHAETCDFSPAKCRNRGCRQVL
NLRDVEAHMRERCEARPAGLCEQGCGLMLTHGERRSGAHSCLRALRAHGAALQARAAALE
KALKKEALRAGKREQSLLSRLAAAQLELQVTALRYQKRFTQYSARLDALARARAASPGKG
EETKALTLVLHRDSGSLGFNIIGGRPCVDNQDGSASEGIFVSKIVDTGPAAKEGGLQIHD
RIIEVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRTPRTKVFTAPDSQLVDVGTQTDIT
FEHIMALSKMGSPAPPVSVLDPYLLPEDHPSVHEYYDPNDYMGGIHQEMDRDELELEEVD
LHRVNSQDKLGLTVCYRTDDEDDTGIYVSEIDPNSIAAKDGRLREGDRIIQINGIEVQNR
EEAVALLTSEESKNISLLVARPEIQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTAS
MLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDDSTRNDESSEQENNADDHTTSSNTLG
SQKKLAYSHDTLGSGDMQFSNESFISADCTDVDFLGIPVDECERFRELLELKCQVKSANP
YSLYYHTSTLDMSKSDQESVDKELEMLNEELRNIELECLNIVRAHKMQQLKDQYREPWML
HNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLRR
TAEGINCQGNEGAVAYNVSQKNLFASSESHESSTGKCHSSAKDPDISKQLESKERKASDG
SKSPTHGQKPSGSYVSPYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSM
CKDFSASQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERAIKIKEERSGMTTDDDAISE
MKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQGAEEKKEMNIIELSHKKMM
KKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgagctggatcgcttcagcggggaggtggaccccgacttcaagtgcaacctg
tgcaacaaggtgctggaggacccgctgaccaccccctgcggccacgtgttctgcgccggc
tgcgtgctgccctgggtggtgcagcagggcagctgccccgccaactgccagcgcatctcc
gccaaggagctcaaccacgtcctgcccctcaagagcctcatcctcaagctggacatcaag
tgcgacaaccacgcgcggggctgcgaggcggtggtgccgctgcagcacctgggagagcac
gccgagacctgcgacttctcccccgccaagtgccgcaaccgcggctgccgccaggtgctc
aacctgcgcgacgtggaggcgcacatgcgggagcgctgcgaggcgcggccggccgggctg
tgcgagcagggctgcggcctgatgctcacgcacggcgagcgccggagcggcgcccacagc
tgcctgcgggccctgcgcgcccacggggccgctctgcaggcgcgggcggcggcgctggag
aaggcgctgaagaaggaggcgctgcgcgccgggaagcgggagcagtcgctgctgtcgcgg
ctggcggcggcgcagctggagctgcaggtgacggcgctgcgctaccagaagcgcttcacg
cagtacagcgcccgcctggacgccctggcccgcgcccgcgccgcctcgcccggcaagggt
gaagaaactaaagcactgactctcgtccttcatcgtgactcaggctctcttggatttaat
attattggtggccgaccatgcgtggacaatcaagatggttcagccagcgaaggaattttt
gtatcaaaaatagttgacactgggcctgctgctaaggaaggagggctgcaaattcatgac
aggattattgaggtcaatgggaaggacttatctaaagcaacgcatgagcaagcagtggaa
gcattcaaaacagccaaggagcccatcgtggtgcaggtcctgaggagaactccgcgcacc
aaggtgttcactgctcctgactctcagctggtggatgtgggcacgcagacagatatcact
tttgaacacatcatggctctaagtaagatgggctcgcctgccccacctgtctcagtgctg
gacccatacctcctacccgaagaccatccatcagtgcatgaatactatgacccaaatgac
tacatgggaggaatccatcaagaaatggaccgagatgagttagaattggaggaagtagat
ttgcacagagtgaacagccaggacaagcttggtcttaccgtgtgctacagaacagatgat
gaggatgacactggtatttatgtgagcgagatcgatcccaacagtattgctgcaaaagat
ggtcgactccgagaaggggatcgcattattcaaatcaatggcattgaggtacagaaccga
gaagaagccgtagcacttctcaccagtgaagagagcaagaatatctccttacttgttgca
agaccagaaattcagctggatgaaggatggatggacgatgacagaaatgattttctggat
gacttgcacatggacatgttagaggagcagcaccaccaggcaatgcaatttactgccagc
atgcttcagcagaagaagcatgaggaagatggtggtaccaccgacacagccactatttta
tctaaccagcatgagaaggacagtggcgtagggcgcacagacgacagcactcggaatgat
gagagctctgagcaagaaaacaatgcagatgatcacaccacttcctctaacactttaggg
agccagaagaagctggcatacagtcatgacaccctcggaagtggcgacatgcagttcagc
aacgagtcatttatctcagctgactgcacagatgttgacttccttggcatccctgtagac
gaatgtgaacgattccgggaactgctggaactcaaatgccaggtgaagtctgccaaccct
tacagcctgtattaccataccagcactctggatatgagcaaaagtgaccaagaaagtgtt
gacaaagagctggagatgctgaatgaggagctgcgcaatattgagctagagtgcctgaac
attgtgagagctcataaaatgcagcagctgaaagatcagtaccgggagccttggatgctg
cataacagtgggtttcgcaactacaacacaagcatcgatgttcgcaggcatgagctctca
gacattacagagctcccggagaagtctgacaaggatagctcgagtgcatacaacaccgga
gaaagctgccgaagcactccgctcacgctcgagatttctcctgacaattccttgcgcaga
actgcagaaggcatcaactgtcaaggtaatgagggagcagtggcatataatgtctcccaa
aagaatttatttgccagctcggaaagtcatgaatccagcactggtaaatgccattcctct
gctaaagatcctgacattagcaaacagctggaaagcaaggagagaaaagccagtgatgga
agcaaaagccctactcacggtcaaaaaccttctggctcttacgtctccccataccatcac
tctccatataagcatgctcatattcctgcccatgcacagcactatcagagctacatgcag
ttgatccaacagaaatcagccgtggagtatgcacagagccaaatgagtctggtgagtatg
tgcaaagacttcagtgcaagccagagtgagccgaggatggaatggaaagtgaaggtccga
agcgatggaacccgctacatcaccaagaggccagtcagggacaggctgctgagagaacgt
gccataaagattaaggaagagcgcagtgggatgactactgatgatgatgccataagtgaa
atgaagatgggccgctattggagtaaggaagaacggaagcagcatttagtgaaagcaaag
gagcagaggaggagacgtgagtttatgatgcagagcaggctggattgtttaaaggaacag
caaggggcagaagaaaagaaagagatgaatatcattgaactgagccacaaaaaaatgatg
aagaaaagaaataaaaaaatatttgacaactggatgacaatccaggaactgcttacccat
ggaacaaagtcaccagacggaacacgagtgtacaattccttcctgtcagtgactactgta
taa
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integrated database retrieval system
