Numida meleagris (helmeted guineafowl): 110405373
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Entry
110405373 CDS
T06015
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1
KO
K09444
interferon regulatory factor 1
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
110405373 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nmel03000
]
110405373 (IRF1)
Transcription factors [BR:
nmel03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
110405373 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
110405373
NCBI-ProteinID:
XP_021266285
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All DBs
Position
12:complement(16440254..16445895)
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AA seq
313 aa
AA seq
DB search
MPVSRMRMRPWLEMQINSNQIPGLIWINKDKMIFQIPWKHAAKHGWDMEKDACLFRSWAI
HTGRYKVGEKDPDPKTWKANFRCAMNSLPDIEEVKDKSINKGSSAVRVYRMLPPLTKDQK
KERKSKSSREARNKSKRKLYEDMRTEESAERLTSTPLPDDHSSYTAHDYTGQEAEVENTS
ITLDLSSCEVSGSLTDWRMPMEIAMADSTNDLYQLQVSPLGSSSEEEDEMKSNIIKLLEP
PPDWHTTSVEGKGFFTNEPGTQSMCSAFGYKEQDGEIDTSSGELEFRMLDQKSSLDFSWL
DSVRPMPAISCSL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtctcaaggatgcgcatgagaccctggttggaaatgcagattaattccaatcaa
ataccggggctgatctggatcaacaaggacaagatgatatttcagatcccatggaaacac
gcagctaagcacggctgggacatggagaaggacgcgtgcctcttccggagctgggccatc
catacaggaagatataaagtaggtgagaaggaccctgacccgaaaacctggaaggcgaac
ttccgctgtgctatgaattcactgcctgacatcgaagaagtgaaggataaaagcatcaac
aaaggctccagcgctgtccgagtgtacaggatgctccctcccctgacaaaggaccagaag
aaggaaaggaagtcaaagtcttcaagagaggcaagaaacaagagcaagagaaagttgtat
gaggatatgaggacggaggagtcagcagaacgactaaccagcactcctctgcccgatgac
cacagcagctacaccgctcacgactacacggggcaggaagcggaggtggagaacacgtcc
atcaccttagacctctcgtcctgcgaggtgagcggctccctgactgactggaggatgccg
atggaaatcgccatggctgacagcaccaacgacctctaccagctccaggtgtcccctcta
gggtcatcctcagaagaggaggatgaaatgaaatcaaacattataaagctgctcgaaccc
cccccggattggcacacgaccagcgttgaggggaagggcttcttcaccaacgagccgggc
acgcagagcatgtgcagtgcgttcggctacaaggagcaggacggcgagatcgacacgtcc
tcaggggagctggagttccgcatgctggaccagaagagcagcctggacttctcctggctg
gacagcgtcagacccatgccagccatctcctgcagcctgtaa
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