Numida meleagris (helmeted guineafowl): 110405489
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Entry
110405489 CDS
T06015
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110405489 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmel03019
]
110405489 (CNOT6)
Enzymes [BR:
nmel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
110405489 (CNOT6)
Messenger RNA biogenesis [BR:
nmel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110405489 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110405489 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
110405489
NCBI-ProteinID:
XP_021266503
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Position
12:complement(13337236..13365243)
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AA seq
557 aa
AA seq
DB search
MPKEKYDPPDPRRMYTIMSSEEAANGKKSHWAELEISGKVRSLSSSLWTLTHLTALHLSD
NSLSRIPSDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTQDILNLYQEPDGTRRLLNYLLDNLAGTAKRISTEQPPPRSWIMLQEP
DRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKAIMQEILSCNADIISLQE
VETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGMEKQLVLVANA
HMHWDPDYSDVKLVQTMMFLSEVKNIIDKASRSLKPGVAGELGTIPLVLCADLNSLPDSG
VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYT
NYTFDFKGIIDYIFYSKPQLNILGILGPLDHHWLIENNISGCPHPLIPSDHFSLFAQLEL
LLPFLPPVNGIHLPGRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggaaaagtacgatccacctgatccacggaggatgtacacaattatgtcctca
gaggaagcagccaacggaaagaaatcacactgggcagagttggaaataagtgggaaagtg
agaagcttaagttcatctttgtggacactgacccatttgacagctttgcatctcagtgac
aattccttatcccgtattccttcagacattgccaagcttcataatctcgtgtatctggac
ctgtcctctaataaaattcgcagtttaccagcagagctcggaaacatggtgtcactcagg
gaactacatttaaataacaacctgttacgagttttaccttttgagctgggaaaactgttc
cagttacagactttgggtctgaaaggaaatccacttacgcaggacattctgaacctgtat
caggaaccagatgggacacgaaggctactgaactatttgcttgataatttggcaggtact
gcaaaaagaatttcaacagaacaaccacctccaagatcttggattatgttgcaagaacca
gaccgtacaagaccaacagccttgttctctgtcatgtgttacaacgttctctgtgataaa
tacgctacccggcagttgtatggctactgtccatcttgggcattgaactgggagtacaga
aaaaaagccattatgcaggaaatcctgagctgcaatgctgacatcataagtcttcaggag
gttgaaactgagcagtactacagttttttcctggtagaactgaaagaacgtggttataat
ggattcttcagtccaaaatccagagctaggacaatgtcagaacaggaaagaaaacatgtt
gatggttgtgcaatatttttcaaaacagagaaatttactttggttcagaaacataccgtt
gagttcaatcaactagctatggcaaactcggaaggctcagaagctatgctgaacagagtt
atgacaaaagataacattggtgttgctgtactattagaactgcgaaaagagttgatagaa
atgtcatctggaaagccacatcttgggatggaaaagcagctagttcttgtagctaatgca
catatgcattgggacccagattattctgatgtgaagctggttcagactatgatgttccta
tccgaggtaaagaacattattgataaagcttctcgtagtctcaagcctggtgttgcaggg
gagcttggaaccattccacttgtactgtgcgccgatctcaattctctgccagactctggt
gttgttgaatacttgagcactggtggagtagaaacaaaccacaaagattttaaggaactg
agatacaatgaaagtcttactaacttcagttgtaatggaaaaaatggaacaacaaatgga
agaattacacatggtttcaagttgaagagtgcctatgagaatggtctaatgccttataca
aattacacgtttgacttcaagggtattattgactacatcttctattctaaacctcagcta
aacatacttggcattcttggacctttggatcatcattggttaatagagaacaatataagt
ggttgtccgcatccactcatcccttctgaccacttctcactttttgcacaactggagctt
ttgctgcctttcctgcctcctgtaaatggaatccatctccctggcaggaggtag
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