Numida meleagris (helmeted guineafowl): 110405606
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Entry
110405606 CDS
T06015
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03440
Homologous recombination
nmel03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110405606 (PALB2)
03460 Fanconi anemia pathway
110405606 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmel03400
]
110405606 (PALB2)
DNA repair and recombination proteins [BR:
nmel03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
110405606 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
110405606 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
110405606
NCBI-ProteinID:
XP_021266689
LinkDB
All DBs
Position
13:complement(7152297..7161784)
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AA seq
1346 aa
AA seq
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MAARLPWAQEAVAMAEAASGVVLSGAEKEKLREKLALLRKEYSETVSRLRRAQRAERAKS
HGGKAAAEAARRPGWGEAPQSPAGCSDNVSPGADRHTTCHLQTETCSGPDTKAKTSVTLK
HSPEFFSNEVSLQDSSQAEGTQANQENASCGLSMPATEEKKTQTSRNMMKLRRRTKTLVS
EEKESVRDMHLVNADVMVKNQPASVEELQSPVFRRSSFSNTEDNAQIESRSVLMGRGESS
LTPPRAEFEVSRDVPEDSIPLGEPELFPCALGYSNDVCQPESPSAMVASDNQEAAQPCSG
SGESVLLDASGGGEKESFRTVKEMDSESMCEDQGELRRLLDLMSENEILPTGTSNNVINE
TKICGGNQNDTGSLNAFPSDLSLGNAEKLLEDQQLEIQSRLSHEEKVTTPESALNSCTVV
EGLPFPVEYYVRTTRRMSNCQRKVDLDAVILSHLGRSKKGQRSKCKQKDASLGQPSQETV
ENHLESAVVPLPFLCAESDPVNSCSPQKHLLTSSGSSTSPGSISQSSTTSTKRDQRQPQR
KQKGRRKSTCKPLVNEMSQELIESLNLVTSRESSSLLSNEYQSEKENCEANLGKSSSDGR
EFSVAAALGSELTDRIQPTSANPPSGSHVLGKCCEAHLEQVQNPLQKSDSLNPGNETFTS
HTSDLECNLSVCQSDKHPVKRVKNQQGHGACRAEQLLAIPLRRSLRSSARQRNSQISKDE
NKRGPGHQVDSEGPASLGLAAKDPDMSSPLFAFRSFQWLAPKLDIKDFHLPDEEFGLLKL
GKYESSPGNDLEVFVPSVFGDGVASEDAPSPEMNVEEKELETNLVSPFKNGLPELPHLES
PPAKVELSTHELLFTPMGTVLTGAPAQRESQISSSVFPVLGATPAVLPPVCSEVFPSTCS
IPPFQVSLHSSKEAPAQVKNNRECKDSAIPLHLDSCGAGSARKEEGQGTTCHLEVEGRPN
NRSDGAVDLKKHQQSQSKHEGSCRASPEQEKTEAEQLTPVLLDGLREENLQFVSKLKDSS
SSCAVDVSSVWWEAAGCRKLCVVTACESSVSLWKPLALDHWEKVYTWQLGEIPVIQIVPL
PDTCNLVCIALGNLEIGEIRLLLYSSENNSFKQSVVKTGNIKAVLGLKDGRLVSSSRAMQ
EQQVEIVSLSETGRCKDRLTLMPPEETVLAFAEVEGMRDALVGTTAVNSVAVWNLKTGQL
LKKMHMGYSYPASICHRAYSDSGLLFVVLSHPHAKESESCGNPAFRVVAFNPKTARSAGV
MFSSLPPGHAGRYVEGEVKDAWAAAVLTSGAIAVWDLLLGCCTALLPPGSDNRWTLVRWS
AAGAGLLAGRADGSVCVYRYAQPGAL
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggttgccatgggcacaggaggcggtagccatggcggaggcggcgagtggc
gtggtgctgagcggggctgagaaagagaagctgcgggagaagctggcgctgctgaggaag
gagtacagcgagaccgtcagccggctgcggcgggcgcagcgagccgagcgagccaagagc
cacggcgggaaggcggcggcggaagcagcccggcggcctgggtggggggaggctccgcag
agccccgcaggctgtagtgataacgtatctcctggtgctgacagacacacaacgtgtcac
ctacagactgaaacctgctcaggtcctgacacaaaggcaaaaacatctgtcacattgaaa
catagtcctgagttcttcagtaatgaagttagcttgcaggacagctcgcaggcagaaggt
acacaggctaaccaggaaaatgcttcctgtggactttctatgcctgctactgaggagaaa
aaaacccaaacttcgagaaacatgatgaagctgaggaggaggacaaagactctggtgtca
gaagaaaaggaatcagtgcgtgacatgcatctcgtcaatgctgatgtaatggtgaaaaac
caaccagccagtgtggaggaacttcagtcaccagtcttcaggcgaagcagtttctcaaac
actgaggacaacgctcagatagagtccagatcagtactcatggggagaggagaaagcagt
ttaactcctccacgtgcagagtttgaagtttcacgggacgtgcctgaagacagcattcct
ctgggagagcctgagctgttcccgtgtgctctgggatacagcaatgatgtctgtcagcct
gagtccccaagcgccatggtcgcatctgataaccaggaagctgcacagccgtgttcaggg
agtggtgaatctgttttacttgatgccagtggtggtggtgaaaaagaatctttcaggaca
gtaaaagaaatggacagtgagagcatgtgtgaagatcagggagaattacgtaggcttttg
gatttaatgtcggaaaatgaaatattgcccactggcacaagtaacaatgtgattaatgag
accaaaatctgtggaggaaatcaaaatgacactggtagtttaaatgcctttccttcagat
ctttctctgggtaacgctgaaaaattgttggaggatcaacagcttgaaattcaatcaaga
ctttctcatgaagagaaggttacaactcctgaaagtgcactgaactcttgcacagtggtt
gaagggcttccctttccagttgaatactatgtcaggacgactcgacgcatgtctaattgc
cagaggaaagtggaccttgatgctgtaattctcagccatctgggcaggagcaagaaaggc
cagagaagtaaatgcaagcaaaaagatgcaagcttaggtcagccctcccaagaaactgtt
gaaaatcatttggagtcagcggttgtgccattgcctttcctttgtgcagaaagcgatcca
gtgaattcttgtagtcctcagaaacatcttcttacgtccagtggtagcagcacttcacct
ggatcgatttctcaaagcagcaccacaagcacaaagcgagatcagagacaaccacagagg
aaacaaaagggaagaagaaagtctacctgcaaaccacttgtgaatgaaatgtcacaggaa
cttatagaaagtttgaatctagtaacgtcaagggaaagcagtagtctgctatcaaatgag
tatcagagtgaaaaggagaactgtgaggctaatcttggaaaatcatcttcggatgggaga
gagttttctgttgctgcagctcttgggtccgaattgacagataggatacagccaacgagt
gccaatcctcctagtggaagccatgtacttggcaaatgctgcgaggctcacctagaacaa
gtccaaaatccactgcagaaaagtgactctctgaacccagggaatgaaacttttaccagc
cacacaagtgatctggaatgcaacttaagtgtgtgtcagtctgataaacatccagtgaaa
cgtgttaagaatcagcaagggcatggagcctgcagggctgagcagctcctcgcaatccct
ctgcgccgctcccttcgttcctctgcaagacagagaaacagtcagatctcaaaagatgag
aacaaaagaggacctggccatcaagtggattcagagggtcctgcttctcttggccttgct
gctaaagaccccgatatgtccagccctctctttgctttccgcagtttccagtggctggcc
cccaagctggatatcaaagactttcatctacctgatgaggaatttggactactaaaactt
gggaaatatgaatcttcccctgggaatgacttggaggtttttgttcctagtgtgtttgga
gatggcgtggcttcagaggatgcaccaagtccggaaatgaatgtagaagaaaaagagctt
gaaactaatctggtttcaccattcaaaaacgggttgcccgagttacctcatttggaaagc
ccacctgccaaggtggaactttctacacatgaattgctgtttactcccatgggcactgtc
ttaactggtgctcctgctcagcgtgagtctcagatttcctcatctgttttccctgtcttg
ggtgcaaccccagctgttttaccaccagtatgcagtgaggtgttccccagtacatgttct
atacctccttttcaagtgagcctgcattcctccaaagaagcacctgcccaggtcaagaat
aatagggaatgcaaagactctgccattccactgcacttggatagctgtggtgcaggatct
gctaggaaagaggaagggcaaggtacaacgtgtcatttagaagttgaaggacgtcctaat
aatagatctgatggggctgtggacttgaagaagcatcagcaatcacaaagcaaacacgag
ggatcctgcagagcttctcctgaacaggaaaaaactgaagcagaacagttgactccggtg
ctgcttgatggcttgagagaagagaacttgcagtttgtttcaaagctaaaggattcttca
agttcttgtgctgtggatgtgagcagcgtgtggtgggaagcagctggctgcaggaagctg
tgtgtggtgactgcctgtgagagttcagtttccctgtggaaaccgctggcacttgaccac
tgggagaaagtctacacttggcaacttggagagattcctgtaatacagattgttcctctg
ccagacacctgtaatcttgtgtgtatagcattgggaaatttggagattggagaaataagg
ctcttgctttattcttctgagaacaactcattcaagcaatcagtagtgaaaactgggaat
ataaaagctgttcttgggctaaaggatgggaggctggtcagcagcagcagagccatgcaa
gagcagcaagtggaaatagtatcgctttcagagacgggaaggtgcaaggatagactgact
ttgatgcctcctgaagaaactgttctggcttttgctgaagtggaaggaatgagagacgcc
ttggttggcaccactgcagtgaacagcgttgctgtttggaatctgaaaacaggccagctc
ctgaagaagatgcacatgggttattcctacccagcttcaatctgccatcgagcatattct
gactctggcctgctgtttgttgttttaagtcatccacatgccaaagagagcgagtcctgt
ggaaaccccgcgttccgtgtggtcgcattcaacccgaaaacagccagaagcgctggggtg
atgttttcctccctcccacctggtcacgctggaaggtacgtggaaggggaggtgaaggac
gcctgggccgcggccgtgctgacctcgggggccatcgcggtgtgggacctgctgctgggc
tgctgcaccgcgctgctgccgccgggctctgacaaccgctggactctggtgcgctggagc
gcggcgggtgcagggctgctggcgggccgggcggacggcagcgtctgcgtgtaccgctac
gcgcagcccggggcgctctga
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