KEGG   Numida meleagris (helmeted guineafowl): 110405606
Entry
110405606         CDS       T06015                                 
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2
  KO
K10897  partner and localizer of BRCA2
Organism
nmel  Numida meleagris (helmeted guineafowl)
Pathway
nmel03440  Homologous recombination
nmel03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:nmel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    110405606 (PALB2)
   03460 Fanconi anemia pathway
    110405606 (PALB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nmel03400]
    110405606 (PALB2)
DNA repair and recombination proteins [BR:nmel03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     110405606 (PALB2)
   FA (Fanconi anemia) pathway
    Downstream FA components
     110405606 (PALB2)
SSDB
Motif
Pfam: PALB2_WD40
Other DBs
NCBI-GeneID: 110405606
NCBI-ProteinID: XP_021266689
LinkDB
Position
13:complement(7152297..7161784)
AA seq 1346 aa
MAARLPWAQEAVAMAEAASGVVLSGAEKEKLREKLALLRKEYSETVSRLRRAQRAERAKS
HGGKAAAEAARRPGWGEAPQSPAGCSDNVSPGADRHTTCHLQTETCSGPDTKAKTSVTLK
HSPEFFSNEVSLQDSSQAEGTQANQENASCGLSMPATEEKKTQTSRNMMKLRRRTKTLVS
EEKESVRDMHLVNADVMVKNQPASVEELQSPVFRRSSFSNTEDNAQIESRSVLMGRGESS
LTPPRAEFEVSRDVPEDSIPLGEPELFPCALGYSNDVCQPESPSAMVASDNQEAAQPCSG
SGESVLLDASGGGEKESFRTVKEMDSESMCEDQGELRRLLDLMSENEILPTGTSNNVINE
TKICGGNQNDTGSLNAFPSDLSLGNAEKLLEDQQLEIQSRLSHEEKVTTPESALNSCTVV
EGLPFPVEYYVRTTRRMSNCQRKVDLDAVILSHLGRSKKGQRSKCKQKDASLGQPSQETV
ENHLESAVVPLPFLCAESDPVNSCSPQKHLLTSSGSSTSPGSISQSSTTSTKRDQRQPQR
KQKGRRKSTCKPLVNEMSQELIESLNLVTSRESSSLLSNEYQSEKENCEANLGKSSSDGR
EFSVAAALGSELTDRIQPTSANPPSGSHVLGKCCEAHLEQVQNPLQKSDSLNPGNETFTS
HTSDLECNLSVCQSDKHPVKRVKNQQGHGACRAEQLLAIPLRRSLRSSARQRNSQISKDE
NKRGPGHQVDSEGPASLGLAAKDPDMSSPLFAFRSFQWLAPKLDIKDFHLPDEEFGLLKL
GKYESSPGNDLEVFVPSVFGDGVASEDAPSPEMNVEEKELETNLVSPFKNGLPELPHLES
PPAKVELSTHELLFTPMGTVLTGAPAQRESQISSSVFPVLGATPAVLPPVCSEVFPSTCS
IPPFQVSLHSSKEAPAQVKNNRECKDSAIPLHLDSCGAGSARKEEGQGTTCHLEVEGRPN
NRSDGAVDLKKHQQSQSKHEGSCRASPEQEKTEAEQLTPVLLDGLREENLQFVSKLKDSS
SSCAVDVSSVWWEAAGCRKLCVVTACESSVSLWKPLALDHWEKVYTWQLGEIPVIQIVPL
PDTCNLVCIALGNLEIGEIRLLLYSSENNSFKQSVVKTGNIKAVLGLKDGRLVSSSRAMQ
EQQVEIVSLSETGRCKDRLTLMPPEETVLAFAEVEGMRDALVGTTAVNSVAVWNLKTGQL
LKKMHMGYSYPASICHRAYSDSGLLFVVLSHPHAKESESCGNPAFRVVAFNPKTARSAGV
MFSSLPPGHAGRYVEGEVKDAWAAAVLTSGAIAVWDLLLGCCTALLPPGSDNRWTLVRWS
AAGAGLLAGRADGSVCVYRYAQPGAL
NT seq 4041 nt   +upstreamnt  +downstreamnt
atggcggcgcggttgccatgggcacaggaggcggtagccatggcggaggcggcgagtggc
gtggtgctgagcggggctgagaaagagaagctgcgggagaagctggcgctgctgaggaag
gagtacagcgagaccgtcagccggctgcggcgggcgcagcgagccgagcgagccaagagc
cacggcgggaaggcggcggcggaagcagcccggcggcctgggtggggggaggctccgcag
agccccgcaggctgtagtgataacgtatctcctggtgctgacagacacacaacgtgtcac
ctacagactgaaacctgctcaggtcctgacacaaaggcaaaaacatctgtcacattgaaa
catagtcctgagttcttcagtaatgaagttagcttgcaggacagctcgcaggcagaaggt
acacaggctaaccaggaaaatgcttcctgtggactttctatgcctgctactgaggagaaa
aaaacccaaacttcgagaaacatgatgaagctgaggaggaggacaaagactctggtgtca
gaagaaaaggaatcagtgcgtgacatgcatctcgtcaatgctgatgtaatggtgaaaaac
caaccagccagtgtggaggaacttcagtcaccagtcttcaggcgaagcagtttctcaaac
actgaggacaacgctcagatagagtccagatcagtactcatggggagaggagaaagcagt
ttaactcctccacgtgcagagtttgaagtttcacgggacgtgcctgaagacagcattcct
ctgggagagcctgagctgttcccgtgtgctctgggatacagcaatgatgtctgtcagcct
gagtccccaagcgccatggtcgcatctgataaccaggaagctgcacagccgtgttcaggg
agtggtgaatctgttttacttgatgccagtggtggtggtgaaaaagaatctttcaggaca
gtaaaagaaatggacagtgagagcatgtgtgaagatcagggagaattacgtaggcttttg
gatttaatgtcggaaaatgaaatattgcccactggcacaagtaacaatgtgattaatgag
accaaaatctgtggaggaaatcaaaatgacactggtagtttaaatgcctttccttcagat
ctttctctgggtaacgctgaaaaattgttggaggatcaacagcttgaaattcaatcaaga
ctttctcatgaagagaaggttacaactcctgaaagtgcactgaactcttgcacagtggtt
gaagggcttccctttccagttgaatactatgtcaggacgactcgacgcatgtctaattgc
cagaggaaagtggaccttgatgctgtaattctcagccatctgggcaggagcaagaaaggc
cagagaagtaaatgcaagcaaaaagatgcaagcttaggtcagccctcccaagaaactgtt
gaaaatcatttggagtcagcggttgtgccattgcctttcctttgtgcagaaagcgatcca
gtgaattcttgtagtcctcagaaacatcttcttacgtccagtggtagcagcacttcacct
ggatcgatttctcaaagcagcaccacaagcacaaagcgagatcagagacaaccacagagg
aaacaaaagggaagaagaaagtctacctgcaaaccacttgtgaatgaaatgtcacaggaa
cttatagaaagtttgaatctagtaacgtcaagggaaagcagtagtctgctatcaaatgag
tatcagagtgaaaaggagaactgtgaggctaatcttggaaaatcatcttcggatgggaga
gagttttctgttgctgcagctcttgggtccgaattgacagataggatacagccaacgagt
gccaatcctcctagtggaagccatgtacttggcaaatgctgcgaggctcacctagaacaa
gtccaaaatccactgcagaaaagtgactctctgaacccagggaatgaaacttttaccagc
cacacaagtgatctggaatgcaacttaagtgtgtgtcagtctgataaacatccagtgaaa
cgtgttaagaatcagcaagggcatggagcctgcagggctgagcagctcctcgcaatccct
ctgcgccgctcccttcgttcctctgcaagacagagaaacagtcagatctcaaaagatgag
aacaaaagaggacctggccatcaagtggattcagagggtcctgcttctcttggccttgct
gctaaagaccccgatatgtccagccctctctttgctttccgcagtttccagtggctggcc
cccaagctggatatcaaagactttcatctacctgatgaggaatttggactactaaaactt
gggaaatatgaatcttcccctgggaatgacttggaggtttttgttcctagtgtgtttgga
gatggcgtggcttcagaggatgcaccaagtccggaaatgaatgtagaagaaaaagagctt
gaaactaatctggtttcaccattcaaaaacgggttgcccgagttacctcatttggaaagc
ccacctgccaaggtggaactttctacacatgaattgctgtttactcccatgggcactgtc
ttaactggtgctcctgctcagcgtgagtctcagatttcctcatctgttttccctgtcttg
ggtgcaaccccagctgttttaccaccagtatgcagtgaggtgttccccagtacatgttct
atacctccttttcaagtgagcctgcattcctccaaagaagcacctgcccaggtcaagaat
aatagggaatgcaaagactctgccattccactgcacttggatagctgtggtgcaggatct
gctaggaaagaggaagggcaaggtacaacgtgtcatttagaagttgaaggacgtcctaat
aatagatctgatggggctgtggacttgaagaagcatcagcaatcacaaagcaaacacgag
ggatcctgcagagcttctcctgaacaggaaaaaactgaagcagaacagttgactccggtg
ctgcttgatggcttgagagaagagaacttgcagtttgtttcaaagctaaaggattcttca
agttcttgtgctgtggatgtgagcagcgtgtggtgggaagcagctggctgcaggaagctg
tgtgtggtgactgcctgtgagagttcagtttccctgtggaaaccgctggcacttgaccac
tgggagaaagtctacacttggcaacttggagagattcctgtaatacagattgttcctctg
ccagacacctgtaatcttgtgtgtatagcattgggaaatttggagattggagaaataagg
ctcttgctttattcttctgagaacaactcattcaagcaatcagtagtgaaaactgggaat
ataaaagctgttcttgggctaaaggatgggaggctggtcagcagcagcagagccatgcaa
gagcagcaagtggaaatagtatcgctttcagagacgggaaggtgcaaggatagactgact
ttgatgcctcctgaagaaactgttctggcttttgctgaagtggaaggaatgagagacgcc
ttggttggcaccactgcagtgaacagcgttgctgtttggaatctgaaaacaggccagctc
ctgaagaagatgcacatgggttattcctacccagcttcaatctgccatcgagcatattct
gactctggcctgctgtttgttgttttaagtcatccacatgccaaagagagcgagtcctgt
ggaaaccccgcgttccgtgtggtcgcattcaacccgaaaacagccagaagcgctggggtg
atgttttcctccctcccacctggtcacgctggaaggtacgtggaaggggaggtgaaggac
gcctgggccgcggccgtgctgacctcgggggccatcgcggtgtgggacctgctgctgggc
tgctgcaccgcgctgctgccgccgggctctgacaaccgctggactctggtgcgctggagc
gcggcgggtgcagggctgctggcgggccgggcggacggcagcgtctgcgtgtaccgctac
gcgcagcccggggcgctctga

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