Numida meleagris (helmeted guineafowl): 110405840
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Entry
110405840 CDS
T06015
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nmel01002
]
110405840 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nmel04121
]
110405840 (USP42)
Enzymes [BR:
nmel01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110405840 (USP42)
Peptidases and inhibitors [BR:
nmel01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110405840 (USP42)
Ubiquitin system [BR:
nmel04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110405840 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
110405840
NCBI-ProteinID:
XP_021267270
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All DBs
Position
13:complement(1033393..1054255)
Genome browser
AA seq
1325 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSGKSKKPRTKNMKSRTANWGRIPPAKDPNQVSVNQGHGGAI
YCRSSEKSKPFALRDLVINDGIAPPQRILFPPEKICMDWQQTQNVGVGLFNLGNTCFINS
ALQCLTYTPPLANYMLSLEHTQSCNYQGFCMMCTMETHINRVLCCAHDAIKPAFVVHELK
RIGKHFRFGAQEDAHEFLRFTVDAMQQACLHGCTILDRSSQATTIIHQIFGGFLRSRVKC
LNCKAVSDTYEAFLDIPLDIKAVSSVTKALEQFVKPEQLDGENCYKCSKCKKMVPASKRF
TIHRSSNVLTISLKRFANFTGGKINKEVKYPEYLDLRAYMSQSIGEPLLYALYAVLVHSG
VNSHAGHYFCFIKAADGLWYQMNDATVVQSNIKTVLGQQAYLLFYIRRYDLTLGERAFYL
PAPSYPRSFLGQRGTNSKQAGFMGPRLPPHMIKNSSRLNGNGSLKEDPNTIGVTLKRPSS
APPTACVQNWAITRPSITDPSKKQKITISIHNKLPARQTVSQPDCLSALEDEELNKSVPS
STITNSSAAESTSNASTMLVATNVSKQEVPDEIFVEPVVNGNPKLSSDNIVSYGTEPSGK
SEEESSKGLFKRNCNVISPNGILIGKVVRTLQNSHPSCQNAEEERSQHELPKNDSLNGAI
SLDNESKENGLKLDDSSCQVQPVKPSEMLFSKTNGVLETMPIALSPVPQEIILDSFAYGQ
LNSLSEEISVPGPQKPSENDSLMETVVMEALLVYEESRKLPSDMSCETGNLFIQSDSETV
STKEEVAESIITKADNAQPNINGQHKVRKRSLDTEDEFLENFESEDSGEKDKPRRSKEPD
LISKENPLYIKGSLETEEELGQTSSIKSDVECSSKKPASLDTADKCQDTKDISNNYVEVP
PVNDSSITKLDKVLESQFSRENEGPTSRNFEENKHRKKDKNIYDSKKTDKEHYRRKRERS
DTEEREKQNSKPDGHSHKRRCSRSVETNKQSRHKQEYCNGNKYRSSYTERNSPDVSRNSG
KYSHYRSRSRGREQGRNRYYHSKGERTWSRERYYQDEPWRWQKCRHYNDYYYSHAKRDSR
ERKFSHYNKDFDKSSQAYSRSHKDYHYKSRRPHNSLSREEDVRHFSSHRADSRHCSVPQQ
QSEKYSHERHVLPPVLSHLNFEDSSPKNEKQSNRKRKYAESSESETEKKSRNVEKDVLDD
EKMKKYKKIKKKKKSKDKHREKDYKLYDSDFSVLHFDNDNRKRKKKKKKKKHIRKLKGFL
EYLDPRFQKKTWEKEGSCSPADCLCEQYRNEGSKQPDREGKPSCASESKNYSSIASNEYI
KDANY
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaagtctaaaaaatcatcatcgaggcggtct
ggcaaatccaagaaaccccgtactaaaaatatgaagtcacgcactgcaaactggggccgg
ataccacctgcaaaagatccaaaccaggtctctgtgaaccaaggacatggaggtgctatt
tattgtagatcatccgaaaaatctaaaccttttgccctaagagatctagtcattaatgat
ggaattgctccaccacaaaggattctttttccacctgagaagatttgtatggattggcaa
caaacacaaaacgttggagttggactcttcaatcttggcaatacatgttttattaattct
gctctacagtgtttgacttacacacccccactcgccaactacatgctttcccttgagcac
acccagtcatgtaactatcaaggcttctgcatgatgtgcacgatggaaactcacattaac
cgagtcctgtgttgcgctcatgatgccatcaaacctgcatttgttgtccatgaacttaaa
cgaataggaaaacatttccgctttggcgctcaggaagatgcgcacgagttcttacgcttc
actgttgatgctatgcagcaagcgtgtttgcatggatgtaccatattggacagatcttct
caagctaccaccatcattcatcaaatatttggaggatttctaagatccagagtaaagtgc
ttgaactgcaaagcagtttcggatacatatgaggcattccttgatatacctctggatata
aaggcagtttcatctgttaccaaagctctagaacagtttgtgaaacctgagcagctggac
ggtgaaaattgctataaatgtagcaaatgtaagaagatggtgccagcatcaaagaggttt
acaatacatcgctcttccaatgttctcacgatatcactgaaaagatttgcaaatttcaca
ggtggaaagatcaacaaggaagtaaaatatcctgagtatttggatcttcgagcttatatg
tctcaatcaattggagaaccactcctttatgccttatatgcagttttggtacatagtggt
gtcaattctcatgcaggacactatttctgcttcataaaggctgctgatggactttggtat
caaatgaatgatgctacagtagtgcaaagtaacatcaaaacagttctcggtcagcaagct
tatttactattttatatcaggcgctatgatttgacactcggagaacgtgctttttactta
ccagcaccgtcttatccccgttcattccttggtcagagggggactaatagtaagcaggct
ggctttatgggaccacgacttcctcctcatatgattaagaattcgagtcgtttaaatgga
aatggatctttgaaagaggatcccaataccattggcgtcaccttaaagaggccatcttca
gctccaccaacagcttgtgttcaaaactgggcaattaccaggccttcaattactgaccca
tcaaaaaaacagaagatcactatcagtattcataacaaattgcctgcacgtcagaccgtg
tcgcagcctgactgtcttagtgctctggaggatgaggagctaaacaagtctgttccttca
tccacaattacaaattcttctgcagcagagtctacctcaaatgcatctacaatgttagtt
gctactaatgtttccaagcaagaagttccggatgaaatttttgttgagccagtagtgaat
ggaaatcctaaactcagctctgataacatagtctcttatggtacagaaccttcaggaaaa
tctgaggaggagtcgtcaaagggcttatttaaaaggaattgcaacgtaatatctcctaat
ggaattttgattggaaaggtagtccgtacattgcagaattcccatccttcctgtcagaat
gctgaagaggaaagatcccagcatgagctgccaaaaaatgattcattaaatggtgctatt
agtttagataatgaatctaaagaaaatggactgaaacttgatgattccagttgccaagtc
caacctgttaaaccttctgaaatgttattttctaaaaccaatggagtgcttgaaacaatg
cctatagctttgtctccagtccctcaagaaataatcctagattcctttgcgtacggccag
ttgaacagcttgtcagaggaaataagcgtccctggacctcagaaaccttctgagaatgat
tctcttatggaaacagtagtgatggaagcgctgttggtctatgaagaatccaggaaactt
ccttctgacatgagctgtgagactgggaatctttttattcagtcagattctgaaaccgtt
tctaccaaagaagaagttgctgaaagtattataacaaaagctgataatgcacaacccaat
atcaatggtcagcacaaggttaggaaaagatccttggacactgaagatgaattccttgaa
aattttgagtctgaagacagtggtgagaaagacaaaccaagaagatcaaaagaacctgat
ctcatttcaaaagaaaatcctttgtatatcaaagggtctctcgagactgaagaggaatta
gggcagacttcctctataaagtctgatgttgaatgtagttctaaaaaacccgcatctctg
gatactgcagataaatgccaagatacaaaggacatatctaataactatgtagaagtccca
cctgttaatgactcttctattacgaagctggataaagttttggagagtcaattttctaga
gaaaatgagggaccgactagtaggaattttgaagaaaataaacataggaaaaaagataaa
aatatatatgattctaaaaaaactgacaaagagcactaccggagaaaaagagaacgctct
gatacagaagagagggagaagcaaaacagcaaaccagatggtcattcccacaagaggagg
tgctctcgtagtgtggaaacaaacaagcaaagtcgtcataagcaggagtattgcaatgga
aacaagtacagatcttcctatactgaaagaaacagccctgatgtcagcagaaactcaggg
aaatattctcattacagatctcgaagcagaggacgagaacaaggtaggaatagatattac
cattccaaaggagagagaacttggagcagagaaagatactatcaagatgaaccatggaga
tggcaaaaatgcagacactacaatgattactattactctcacgctaaaagagatagtcga
gaaagaaagttctcccattacaataaagattttgacaaatcaagtcaagcttacagcagg
tcacataaggattatcattacaaaagcagacggcctcacaactcactctctagagaggag
gatgtacgtcactttagcagccacagagcagactcacggcattgttcagtacctcagcag
caatctgaaaaatattctcatgaaagacatgtacttccacctgtgttatctcatctaaat
tttgaggactcttcccccaaaaatgaaaaacaaagcaacagaaaaagaaaatatgcagaa
agtagtgaaagtgaaacagaaaagaaaagcagaaatgtagaaaaagacgttttggatgat
gaaaagatgaaaaaatacaagaagatcaagaagaaaaagaagtccaaagataaacatcga
gagaaggattacaaactttatgattcggatttctctgtgctccactttgacaatgacaat
cgcaaacgtaagaaaaaaaagaaaaagaagaaacacatcaggaaattgaaaggcttcttg
gaatacttagatccccgtttccagaagaaaacatgggagaaggaaggatcttgctctcca
gctgactgtttatgtgagcaatacagaaatgagggcagtaaacaacccgacagggaaggg
aagccttcctgtgcaagtgaaagcaagaactacagctccattgcatccaatgagtatatt
aaagatgcgaattactga
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