Numida meleagris (helmeted guineafowl): 110405842
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Entry
110405842 CDS
T06015
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03430
Mismatch repair
nmel03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110405842 (PMS2)
03460 Fanconi anemia pathway
110405842 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmel03400
]
110405842 (PMS2)
DNA repair and recombination proteins [BR:
nmel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
110405842 (PMS2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
110405842
NCBI-ProteinID:
XP_021267276
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Position
13:1074995..1086897
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AA seq
891 aa
AA seq
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MAGPSGDGVGPAGGRGEGPGSMEEAAPCSEPAEAIRRIDRESVHRICSGQVVLSLGTAVK
ELVENSLDAGATNIDVRLKDHGAELIEVSDNGGGVEEENFEGLTLKHYTSKIQDFSDLIH
VETFGFRGEALSSLCALSDVAISTCHKSAKVGTRLVFDHNGRITQRAPYPRQQGTTVSVQ
QLFHTLPVRHKEFQRNIRKEYAKMVQILQAYCIISKGVRINCTNQVGQGKKNPVVSTTGS
PNLKENIGAVFGKKQMQSLVPFVQLPPNEAVCEEYGLKSADLPEKLYSITGFVSRCDHGV
GRSTTDRQFFFINQRPCDPAKVVKLVNEVYHLYNKHQYPFIVLNICVDSECVDINVTPDK
RQILLQEEKLLLAILKTSLIEMFGSDVNKLNVNQNLLDIAGNVKTPPGDTEKPWVEMPRD
SETENPSSEGKRVMTLARLRESFSLHQTESHFQRPKKVKQRHSSTKQLSLDTVLSTVKTG
KAALSEDSESCHETKSKMSVPKRDLRKLQENTDSGFCSISGSDAGYNTPEAGSYVSSESV
NNPVEEKFCSSEEQHQNERLKIAGHSEKSLECDIQVLGTELKLNQVNDWSNPNNLPQEAS
DSLPRVKCFKREAGDFKAGVHPEAKNTRNSMPCVDVLVEVKKKTVPLEFSMKALAERVRK
IVQQQQKCTETQNYRRFRAKISPGENKVAEEELRKEISKEMFAKMEIIGQFNLGFIIAKL
NSDLFIIDQHATDEKYNFEMLQQHTVLQGQKLIVPQNLNLTAVNETVLIENLEIFRKNGF
DFVINENAPVTQRVKLISLPTSKNWTFGPQDIDELIFMLSDCPGVMCRPSRVRQMFASRA
CRKSVMIGTALNTQEMKKLVTHMGEIEHPWNCPHGRPTMRHIASLDLIASE
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggcggggccgagcggagacggggtcgggcctgcgggcggccgaggcgaggggccgggg
tccatggaggaggctgcgccctgctcggagcccgccgaggccatcagacgcatcgaccgc
gagtctgtgcaccggatctgctcggggcaggtggtgctgagcctgggcacggccgtgaag
gagctggtggagaacagcctggacgccggagcgaccaacatcgatgtaagacttaaagac
cacggggcggagctgatagaggtttcggataacggaggtggagtggaagaggaaaacttc
gaaggattaactctgaaacattacacatcaaagatacaagatttttctgatctaatacat
gttgaaacatttgggtttcgaggtgaagctctcagttcattgtgtgcattaagtgatgtt
gccatttctacttgccataagtctgcaaaggttgggactcgcctggtgtttgatcacaat
ggtaggattacccagagggctccttatccacggcagcaaggaacaactgttagcgtgcag
cagttatttcatactttgccagtgcgacataaggaattccaaagaaacatcagaaaggaa
tatgcaaaaatggtccagatactgcaagcatactgtattatttcaaaaggagtgcggatt
aattgcactaatcaggttggccaaggaaaaaagaaccctgtggtatccactactggaagc
cctaacttaaaggaaaacattggagcggtatttgggaaaaaacagatgcagagcctggtt
ccttttgttcagctgcctcctaatgaagctgtttgtgaagaatatggactgaaatctgca
gaccttccagaaaagctttatagtattacaggcttcgtttctcgttgtgatcacggtgtt
ggaaggagtacaacagacagacagttcttctttatcaaccagcgtccatgtgatccagca
aaggttgtcaagcttgtgaatgaagtttatcacttatacaataaacaccagtatcctttt
attgtccttaacatttgtgtagattctgaatgcgttgacatcaatgtaactccagacaag
agacaaattttgcttcaagaagaaaagcttttattggcaattttaaaaacttctctgata
gagatgtttggtagcgatgttaacaaactgaatgtgaatcagaatcttctggacattgca
ggcaatgtgaagacgcctcctggagacacagaaaagccctgggtagaaatgccgcgtgac
tcggagactgaaaatccaagcagcgaaggaaaaagggtaatgactctggccagattaagg
gagtcgttctctctccatcaaactgagagtcattttcaaaggcctaaaaaggtaaaacag
cggcacagctccactaaacagctgtcactcgataccgttttgagtactgtgaagactgga
aaggctgctttgagtgaggattctgagagctgtcatgagacgaagtcaaagatgtcagtt
ccaaagagagatttgagaaaactacaggaaaacacagattctggattctgtagcatttct
ggatcagatgctggatataacacaccagaagctgggagctatgtcagtagtgaaagtgta
aataatcctgttgaagaaaaattctgtagctcagaagaacagcatcaaaatgagcgtctt
aaaattgctggacatagtgagaaatcattggaatgtgacattcaggtcttgggcaccgaa
cttaagctaaatcaagtgaatgactggagtaacccaaataacttacctcaagaagccagt
gattcgttaccaagagtaaaatgttttaaaagggaggcaggtgacttcaaggcaggtgta
catcctgaagcgaagaataccagaaactctatgccatgtgttgatgtcctggtagaagtt
aaaaagaaaaccgtgccgctcgaattctctatgaaagctttagcagaaagggtaagaaag
atcgtacagcaacaacagaagtgtacagaaacacaaaattacagaagatttagagcaaaa
attagtcctggagaaaataaagtagcagaagaggaattaagaaaagagatcagtaaagaa
atgtttgcaaaaatggaaatcattggccagttcaatttagggtttataatagctaagttg
aattccgatcttttcataattgaccaacatgctactgatgagaagtacaactttgagatg
ttacagcaacacactgttcttcaaggccagaagctgatagtgcctcaaaatctcaattta
actgctgtaaatgaaacagtgttgattgaaaacctggaaatattcagaaaaaatgggttt
gattttgtgataaatgaaaatgctcctgtaacccagagggttaagttaatatccttgcca
acaagcaaaaactggacattcggtccgcaagacatagatgagctgatcttcatgttaagt
gactgccctggggtcatgtgtcgaccctccagagtcagacagatgtttgcttctcgagct
tgcagaaaatctgtgatgattggcactgcactgaacacacaggagatgaaaaaactggtt
acccacatgggtgagattgagcatccctggaactgcccccacggaaggcctacgatgagg
cacatagccagcctggacttgattgcatctgagtga
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