Numida meleagris (helmeted guineafowl): 110406143
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Entry
110406143 CDS
T06015
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
110406143 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nmel01001
]
110406143 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
nmel04054
]
110406143 (CIITA)
Enzymes [BR:
nmel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
110406143 (CIITA)
Protein kinases [BR:
nmel01001
]
Serine/threonine kinases: Other
TAF1 family
110406143 (CIITA)
Pattern recognition receptors [BR:
nmel04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110406143 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
NB-ARC
LRR_9
nSTAND_NTPase5
RsgA_GTPase
NPHP3_N
PH_37
nSTAND3
AAA
Motif
Other DBs
NCBI-GeneID:
110406143
NCBI-ProteinID:
XP_021267916
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All DBs
Position
13:complement(9414518..9454593)
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AA seq
1121 aa
AA seq
DB search
MELQDNKRQIMDSASVSENSYLDLLLCDSDPLHLFTFSDPKSSGNEGEFFSDPEVDTCNY
EQFSNMDFLCTVENDENGDELYPSSNGRDAYSRIAELAEYVLKDQHEKQVEDAFAVNLIL
DDVALENTEKFTDVKVQKCHKRAFLGSAENCSDASEPKYKKIVDAPAVSTGNGCFLAMSL
NSHSSNSTSLTHQHMSFSVPTVNALGSFVIPVSGSSVPVIPECVPLGMKDNIENVDFVDP
AQQKISYFLGNGPSNAIKYPALTSSTELMVSPSFQVNLSGLEMFEEVQVPIILSEETSRR
PRSVEAFSTSLMDYFRDVCKSVSVEREMSLDHMYIDGTLIQSQIETKPGKNSVKSVEKDL
VTHSQQGKEKAVLERSQIFQISGGKELETKVIVVLGKAGMGKSILVQKICQDWSNGEFPQ
FEFVFWFDCKQISLPGKWYSLKDLLLDFFVKPQEGSKEIFEYILQNSTKVLLVFDGLEGL
HGHENFPPCSASQPSKDLCRVKELLSGLIQKKILNGCTLLLTARTKDKVCQYVSKVDKTI
EIVGFSPRQRELYITKYFEGLPSCDNALNLIKEHEYLFSHCYSPVMCRFVCFLCETILEM
GDKGLPSTLTTLFLKFVQQKIMPTQTDVTDVTLVQNQENLATLACIAWYLGEKHQSAMKS
DLLPSKKIKEFALKYGFFLPFAFPKYSGTGEEEFGTMFSDFVIQNFLGALHLILAEGIKD
KSLIKYLSFPSKKKKPYNWLHLVPRFLAGLLFLQDDTCFCSLSNKSVKKSTKKQKMLLKY
VKRLQINNLCPERLLELLHCIYETQNNYLLQHVALRLKSDLSFLGIVLTPPDVHVLSSTL
KRSRKEFSLDLQNSSIDTHGLKDLVGLRNVTSFRASLSDTIRLWKYLEQTKDYELLRVST
EKFVLDPFKAKTMKDISDLSDLIEMQKMIINCVQDASGCSSYEIPAIKNLRKLEFALGPA
CGLQGFQKLVEILAAFPSLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQNKI
TDVGAEKLATALPSLSSLTTLSLYNNSICDFGAENLAKVLPAMASLRVLDVQYNKITGVG
AQQLTDSLRKCPHIKNLVMWNPTIPYGVLEHLQQLDSRISV
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcaagacaacaagagacaaatcatggattcggcatctgtgtctgaaaatagc
tatcttgatttgctgctttgtgatagtgatccactgcatctatttacgttctcagatcct
aagtcatctggaaatgaaggtgaattcttttcagatcctgaagttgatacctgcaactat
gaacaattcagtaatatggatttcctgtgtacagtggaaaatgatgaaaatggggatgaa
ttgtatccttcttccaatggcagagatgcctattctagaatagctgaattagcagaatat
gtgctcaaggatcagcatgagaagcaggtggaagatgcttttgcagtgaaccttattttg
gatgatgtggctcttgaaaacactgagaaattcactgatgtaaaggtgcagaaatgtcat
aaaagagcttttttagggtctgcagagaattgctctgatgcttcggaacccaaatacaag
aaaattgtggatgcccctgcagtatcaacagggaatggatgtttcctagcaatgtctctc
aacagccattcatctaactccacctcactaacacaccagcacatgtccttttctgttccc
actgtcaatgcattgggaagttttgtaattcctgtttcagggtcttcagtacctgtgatt
ccagagtgtgtgccacttggcatgaaagacaacatagagaacgtagactttgtggatcct
gctcagcagaaaattagttattttcttggaaatggcccatctaatgctataaaatatcca
gcactgacttcctccactgaattaatggtatccccaagttttcaagttaatttaagtggc
ttagaaatgtttgaagaagtgcaagtgcctataattctttctgaagaaacttcaaggaga
ccaaggtcagtggaagctttctctacatcacttatggattacttccgagacgtatgcaaa
tctgtgtctgtggagcgtgaaatgtctcttgatcacatgtatattgatggcacacttatc
caaagccaaattgaaaccaagcctgggaagaacagtgtaaaatcagtggaaaaggatttg
gtaactcatagtcagcaagggaaggaaaaggcagtccttgaaagaagccaaatatttcaa
atctcaggaggtaaagagttagagactaaagtgattgtggtgttgggaaaagcaggaatg
ggcaaaagcattcttgttcagaagatctgccaggactggtccaatggagagtttcctcag
tttgaatttgtcttttggtttgactgcaaacaaataagcttgcctgggaagtggtacagc
ttgaaggatctacttcttgatttttttgtaaaacctcaggagggaagcaaagagatcttt
gaatacatacttcagaattctactaaagtccttctggtttttgatggtttggaagggttg
catggccacgagaattttcctccttgttcagccagccagcctagcaaagacttgtgccga
gtaaaggagctgctttcaggactcatccaaaaaaagatactcaatggctgtactttatta
cttacagcaagaacaaaagataaggtgtgccagtatgtgtccaaagtggataagactatt
gaaatagtaggattctcccctcggcagagagaactgtacataaccaaatactttgaagga
ttaccctcatgcgataatgcactgaatttaatcaaagagcatgagtacctcttcagtcat
tgttacagccctgttatgtgtagatttgtctgttttctctgtgagacaatacttgaaatg
ggagacaaaggccttccttcaactcttactacactcttcctgaaatttgttcagcaaaaa
ataatgcctacgcaaacagatgttacagatgttacacttgtgcaaaatcaagaaaatctt
gctacgctagcctgtatagcctggtatcttggagaaaagcaccaaagtgccatgaaaagt
gatcttcttccttctaagaaaattaaagagtttgctctgaaatatggatttttcctgcca
tttgcattccccaaatattcaggtacaggagaagaggaatttgggaccatgttctccgat
tttgtcattcagaatttcttgggtgctcttcaccttatattagcagaaggcatcaaggac
aaaagtctaataaagtacctgtcttttccatccaagaagaaaaaaccttacaactggtta
catttagtgcctcgatttttggctggattgttgttcctccaggatgacacctgcttctgc
tccctttcaaataagagcgtgaaaaaatccaccaagaagcagaaaatgctcctgaaatat
gttaaaaggttgcaaataaacaacctttgtccagagaggttacttgagcttttgcactgt
atttatgaaacacaaaacaattatctcttgcagcatgtggccttaagactcaagtcagac
ctgtcctttctgggcatcgttcttacaccacctgatgtccatgtactgtcctctacttta
aaaaggtcaagaaaagaattttccttggatttgcaaaacagcagtattgatacgcatggg
ctgaaagacttggtcggcctgaggaatgtgacatcattcagggcctccctcagtgataca
atcaggctatggaaatacttagaacagacaaaagactatgagctgctgagagtgtcaaca
gaaaaatttgttcttgatccgtttaaggcaaagacaatgaaagacatcagcgacctttct
gaccttatagaaatgcagaagatgataatcaattgtgtgcaagatgcctctggttgcagc
agctatgaaattcctgccataaagaacctgagaaaactagaatttgctctgggtccagca
tgtggccttcagggattccaaaaactcgtggaaattcttgcagcatttccatcacttcag
catttggaccttgatgcgctgagtgaaaatggcataggagatgaaggagcaaagagtctg
tctgaagtctttccaacactgacatcactggaaacattaaacttgtcacagaataagata
acagatgtgggtgcagagaaactagctacagctcttccctccttgtcttcattaacgaca
ctaagcttgtacaataatagcatttgtgattttggagcagaaaaccttgcaaaagttctt
cctgcaatggcatctttaagagtgctagatgttcagtataacaaaataaccggtgttgga
gcccaacagctgactgacagcctaagaaaatgtccccatataaaaaatttggtgatgtgg
aatcctacaattccgtatggagttcttgaacaccttcagcagctggactctaggatcagt
gtgtag
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