Numida meleagris (helmeted guineafowl): 110406227
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Entry
110406227 CDS
T06015
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03030
DNA replication
nmel03410
Base excision repair
nmel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110406227 (POLE)
03410 Base excision repair
110406227 (POLE)
03420 Nucleotide excision repair
110406227 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmel03032
]
110406227 (POLE)
03400 DNA repair and recombination proteins [BR:
nmel03400
]
110406227 (POLE)
Enzymes [BR:
nmel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
110406227 (POLE)
DNA replication proteins [BR:
nmel03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
110406227 (POLE)
DNA repair and recombination proteins [BR:
nmel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
110406227 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Na_trans_assoc
Motif
Other DBs
NCBI-GeneID:
110406227
NCBI-ProteinID:
XP_021268110
LinkDB
All DBs
Position
14:complement(10395094..10414423)
Genome browser
AA seq
2292 aa
AA seq
DB search
MVLRGGGGGGGGGDRDRDRDRDPEGTRDDGPALSALKRLERSQRTDRLDALFGFERPSEP
CERTGWLINMHPTEVLDEDRRAVSAVDYYFIQEDGSRFKVALPYRPYFYVATQQGCEREV
SSFLAKKFQGKIAKLETVPKEDLDLPNHLVGLKRHYLKLSFSTVDELVKVRKEISPAVRK
NRERNQASDVYTSMLSSALAGGSLTTAEEGASKKVTNQMDNIVDMREYDVPYHVRLSIDL
KIHVAHWYNVRYRGSTFPPEITPRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMI
SYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKP
TIIVTYNGDFFDWPFVEARAAAHGINMYQEIGFQKDSQGEYKASQCIHMDCLRWVKRDSY
LPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHP
FIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDGHVLDS
ETYVGGHVEALESGVFRSDIPCRFKMNPAAFDYLIQHVEKTLQHAIEEEEHLPLDQVTNF
QEVCDEIKVKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDF
NKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLFPDGAPRAFHELSREEQA
KYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWK
KKLSAAMETGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVC
FTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAM
LNILVKEGFTNDQYQELQDPASLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRY
AVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDV
LYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSC
RFIISKKPEGSPVTERAIPLAIFQAEPSVRKHYLRKWLKSPSLQDFNIRAILDWDYYIER
LGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFTSEGKRQVL
ANQPQEGTPSSQIGDIEDFGAAKSLQPSVPIANKRKRVSTAEESQQMSQSLELSQSWREI
LGPPPSMGTTKEELVAWLRFHQKKWELQARQRRERQKRRRLEDGGTAAGGGVVRDALSRG
LGSYLRRTARSILDLPWQIVQIAETSQPGLFRLWAVIGSDLHCIKLSIPRVFYVNQRVAK
PEEGAVYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLL
LRALIQLGCVCMVSRQLARHLTGREADTFDIEHLEMRSLAQFPYLEPGSIRHIYLYHSSQ
GSKALFGLFIPAQRKAAVFVLDTVRSNQMPNLTTMFSAERGALLERVGEELLPPDKHTFE
VRAETDPKAICRAIQRLLLGYKDERRGPTLIAVQSNWELKRLASSIPILEEFPLVPIRVT
DDISYSVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGSDLFFS
RHLRRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCLELDIQSL
AVNTVLQSHQVNDMEGGSSMSISFDVIQQASLEDMVTGNQAANIPASYDETALCSNTFRI
LKSMVVSWVKEITQYHNIYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVA
EFRRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSRCWEFL
LWMDPANYGGIKGKVHSRIHCGEKDTSKRKGLEEGDSEEEEEAGEEEEEEEEEGEPNVEE
LLENSWNIVQFLPQAASCQNYFLMIVSAYIVAVYHSMKEELRRNAPGSTPVKRRGTSQVS
QEAQGETGAMPGMITFSQDYVANELTQSFFTITQKIQKKMSGSRHATEPSDLFPVLPGSY
LPLNNPALEFIKYVCQVLSLDANITNQVNKLRRDLLRLIEVGEFSDEAQFRDPCRSYVLP
EVICRNCNFCRDLDLCKDPALSQDGSVLPSWACSNCQAQYDSDSIEMALVEALQKKLMAF
MLQDLVCKKCHGVKDTHMPVYCSCAGDFALTISSQTFMEHITVFQNIARHYGMAHLLETI
EWLLRTSPQLQQ
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgcggggcggcggtggcggtggcggtggcggtgaccgtgaccgtgaccgtgac
cgtgaccctgaaggcacgcgggacgatggccccgcgctgtccgccctcaagcgcctggag
cggtcgcagcgcacggaccggctggacgcgctgttcggcttcgagcggccctcggagccc
tgcgagcggacgggctggctcatcaacatgcacccgaccgaggtgctggatgaggaccgg
cgggcggtgagcgctgtggactattacttcatccaggaggacggcagccgcttcaaggtg
gccctgccctacagaccctacttctatgtggccacccagcagggctgcgagcgggaggtg
tcctccttcctggccaagaagttccaagggaagattgcgaagctggaaactgtcccaaag
gaagatttggatctgcccaaccacctggtggggctgaagcggcactacctcaagctgtcc
ttcagcacggtggacgagttggtgaaggtgcgcaaggagatctccccagccgtcaggaag
aacagggagcgcaaccaggccagcgacgtctacacatccatgctgtcaagtgctctggct
ggaggcagcctgaccacagcggaggaaggagcctccaaaaaggtcaccaaccaaatggac
aacatcgtggacatgcgggagtacgatgtgccctaccatgtgcggctctccatcgacctg
aagatccacgtggctcactggtacaacgtgcggtaccgcggcagcaccttcccccctgag
atcaccccccgggatgacctggtggagcggccggatcccgttgtcctcgcctttgacatc
gaaaccaccaaactccccttgaagtttcctgatgcggagacggaccagatcatgatgatc
tcctacatgattgatgggcagggctacctgatcacaaacagggagatcgtctctgaggat
atcgaagactttgagttcactcccaagccagagtatgagggtcccttttgtgtctttaac
gaaccagatgaagctcatttaatccagaggtggtttgaacacgtccaggagaccaaacct
accatcattgtcacatacaatggagacttctttgactggccctttgtggaagcaagagca
gcagctcatggaattaacatgtaccaggaaatcggatttcagaaggacagccagggagag
tacaaagcatcgcagtgcatccacatggactgtctgaggtgggtgaagagagacagctac
ctcccagtgggaagtcacaacctgaaggcagcagctaaagcaaaactgggctacgaccca
gtggagctggaccctgaagagatgtgccggatggctacagaggagcctcagaccctggcc
acctattcagtgtccgatgccgttgccacctattacatgtatatgaagtatgtgcatcct
ttcatttttgccttgtgcaccatcatccccatggagcccgatgaggtgttacgaaaaggc
tctgggacgctgtgcgaggcgctgctgatggttcaagcctatcacgccaacatcatcttc
cccaacaagcaggagcaggaattcaacaagctcacggaggatggccacgtgctggactca
gagacatacgttggaggccacgtggaagcgctggagtcaggggtgttccgtagtgacatc
ccctgccgcttcaaaatgaaccctgctgcctttgactacttgatacagcacgtggagaag
acgctccagcacgctattgaggaggaggagcatttgccattggatcaagtcaccaacttc
caggaggtctgtgatgaaatcaaagtgaaactgaattccctgaaggacgttcctaaccga
attgagtgtccccttatctaccatttagatgtgggggccatgtaccccaacatcattctg
accaacaggttgcagccctcagcaatggtggatgaggccacatgtgctgcctgtgacttc
aacaagccaggggccaactgccagcgccggatgacttggcaatggagaggagaattcatg
cccgcgagccgcagtgaataccaccgcatccagcagcagttggagtcggagaagttccct
ccgctcttccctgatggagcaccccgtgccttccacgagctctcccgagaagaacaagcc
aagtatgagaagaagcggctggcagattactgccgcaaagcctacaagaagatccatgtc
accaaggtggaggagcgggtcaccaccatctgccaacgagagaactccttctacgtggac
acagtgcgagctttcagggaccgccgctatgagttcaaggggctgcacaaggtgtggaag
aagaagctgtctgcagccatggagacaggagatgcctctgaagtgaaacgctgcaagaac
atggagatcctctacgactccctgcagttggcacacaagtgcattctcaattctttctat
ggctatgtcatgcggaaaggagctcgctggtactccatggaaatggccgggatcgtctgc
ttcaccggagccaatatcatcacgcaggccagggaactgatagagcagattgggagacct
ctggaactggatacagatgggatttggtgcgtcctccccaacagcttcccagaaaacttt
gtcatcaagtcaaccaatgccaagaagccgaaggtgacaatctcctacccgggtgctatg
ctgaacatcctggtgaaggaaggcttcacaaacgatcagtaccaggagctgcaggaccca
gcctctctcacctacgtcacacgctcagagaacagcatcttctttgaagtggatgggcca
tacctggccatgatcctcccagcttccaaggaggagggaaagaagctgaagaaaaggtat
gcagtattcaacgaggacgggtccctggctgagctgaagggctttgaggtgaagcgccgg
ggcgagctgcagctggtgaagatattccagtcttctgtattcgaggccttcctgaaaggc
accaccctggaggaggtctatgcttctgtggccaaggtggctgactactggctggatgtg
ctctacagcaaggctgccaacatgcccgattcggagctgtttgagctcatctcggagaac
cgctccatgtctcgcaagctggaggactacggggagcagaaatccacctccatcagcact
gccaagcgcctggcggagttcctgggggaccagatggtgaaggacgcggggctgagctgc
cgcttcatcatctctaagaaacccgagggctctcctgtcactgagagggccatccccctt
gccatcttccaagcagagcccagcgtacggaagcattacctccggaaatggctgaagagc
ccctcgctgcaggacttcaacattcgggcgatcctggactgggactactacattgagaga
ctgggaagcaccatccagaaaatcatcactattcctgcagctctgcagcaggtaaagaac
ccggtgccacgggtccggcacccagactggctgcacaagaaactcctggagaagaatgat
gtgtacaaacagaaaaagatcaacgagctcttcacttctgaaggcaagaggcaggtcctc
gccaaccagccccaggagggcacacccagctcgcagattggtgacatagaggattttggg
gctgccaagagccttcagccatccgttcccattgcgaacaaacgaaagcgagtctctacg
gcagaggaaagccagcagatgtcccagagcctggagctgtcccagtcctggcgggagatc
ctgggccctcctccctccatgggtaccaccaaggaggagctcgtggcctggctgcgcttc
caccagaagaaatgggagctgcaggcccggcagcggcgcgagcggcagaagaggcggcgc
ctggaggacggtgggacggcggcgggcggtggggtggtccgcgatgccctctccaggggg
ctgggcagctacctgcgccgcaccgcccgcagcatcctggacctgccctggcagatcgtg
cagattgcggagaccagccagcccggcctgttcaggctgtgggcggtgatcgggagcgac
ctgcactgcatcaagctgagcatccccagggtgttctacgtcaaccagcgcgtcgcgaag
ccggaggagggagcagtctacaggaaggtgaacaggatcctgccccgatcgaacctggtg
tacaacctgtacgagtactcagtccctgaggacatgtaccaagagcatatcaacgagatc
aacgctgacctctctgctccagacatcgagggagtgtatgagactcaggtaccgctgctg
ctgcgggctctgatccagctgggctgtgtctgcatggtcagcaggcagctcgcccggcac
ctgacgggccgcgaggccgacaccttcgacatcgagcacctggagatgcgctcgctggcc
cagttcccctacctggagccagggagcatccgccacatctacctctaccacagctcccag
ggcagcaaggccctcttcggcctgttcatccccgcgcagcgcaaggccgccgtcttcgtg
ctggacacggtgcgcagcaaccagatgccgaacctcaccaccatgttctcggcggagcgc
ggcgcgctgctggaaagggtgggcgaggagctgctgcctccagacaagcacaccttcgaa
gtgcgtgccgagaccgaccccaaggccatctgcagagccatccaacgcctgctgctgggt
tacaaggacgagcgccggggtcccacgttgatcgctgtgcagtccaactgggagctgaag
cggctggcgagcagcattcccatcctcgaggagttccccctggtccccatccgggtgaca
gatgacatcagctactcagtcctggactggcagcgccacgcagcccgacgcatgatccgc
cattacctcaacctggacacgtgcctgtcacaagcctttgagatgagcaggtattaccac
attcccatcgggaatctccccgatgacatctccacctttggctctgacctcttcttctca
cgccacctccggcgtcacaaccatttgctgtggctctcgcccacggcccgcccagacctg
ggggggaaggaggctgatgacaaccgcctcgtcatggagttcgatgagagagcctcggtg
gagataaacaaccccggctgctactccacggtgtgtctggagctggacatccagagcctg
gctgtgaacacagtgctgcagtcccatcaggtaaatgatatggagggaggttccagcatg
agcatcagctttgacgtcattcagcaggcatccctggaagacatggtgacggggaaccaa
gctgccaacatcccagccagctatgatgaaactgccctctgctccaacacattcaggatt
ctgaagagcatggtggtgagctgggtgaaggagatcacgcagtaccacaacatctacgcg
gacaaccaggtcattcacttctaccgctggcttcgctctccttcctcgctgctctacgac
ccggcgctgcaccgcaccttgcacaacatgatgaagaagctcttcctgcagttggtggct
gagttcaggcgcctcggctcttccgtggtgtacgccaacttcaaccggatcatcctgtgc
accaagaagcggcgtatcgaggatgccatcagctacatggagtacatcatcaacagcatc
cactcaaaggagatcttccactctctgactatttccttctcccgctgctgggagttcctg
ctctggatggatccagccaattacgggggtatcaagggaaaagtgcattctcgcatccac
tgcggggagaaggataccagcaagaggaaagggctggaggagggagacagtgaggaagag
gaggaggcaggggaagaagaagaggaggaggaggaggaaggggagcccaacgtggaggag
ctgctggagaacagctggaacatcgtgcagttcctgcctcaggctgcctcctgccagaac
tacttcctgatgatcgtgtcggcctacatcgtggccgtgtaccacagcatgaaggaggag
ctgcggcgcaacgcccccggcagcactcccgtcaagaggagaggaaccagccaggtgtcc
caggaggcacagggcgagacgggagccatgcccggcatgatcacgttctcacaggattac
gtggccaacgagctcactcagagcttcttcaccatcacgcagaagatccagaagaagatg
tctgggtcccgacacgccacggagccgtcggacttgttcccggtgctgcccggctcctat
ttgccactcaacaacccggctctggagttcatcaaatacgtttgccaggtgctgtccctg
gatgccaacatcaccaaccaggtgaacaagctgcgcagggacctgctgcgcctcatcgag
gtgggcgagttctcagacgaagcccagtttcgggacccttgccgctcctacgtgctccct
gaagtcatctgcagaaactgcaacttctgcagggacctggacctgtgcaaggaccctgcc
ctctcccaggacggatcggtgctgcccagctgggcgtgctccaactgccaggcgcagtac
gactccgactccatagaaatggccttggtggaagccctgcagaagaagctgatggccttc
atgctgcaggacctggtgtgcaagaagtgccacggcgtgaaggacacgcacatgcctgtg
tactgcagctgtgctggagactttgccctcaccatctcctcccagaccttcatggagcac
atcaccgtcttccagaacatcgcccggcactacggcatggcccatctgctggaaaccatc
gagtggctgctgcgcaccagcccccagctccagcagtga
DBGET
integrated database retrieval system
