Numida meleagris (helmeted guineafowl): 110406456
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Entry
110406456 CDS
T06015
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nmel03009
]
110406456 (DDX54)
Enzymes [BR:
nmel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110406456 (DDX54)
Ribosome biogenesis [BR:
nmel03009
]
Eukaryotic type
Pre-60S particles
Helicases
110406456 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
110406456
NCBI-ProteinID:
XP_021268668
LinkDB
All DBs
Position
14:complement(10288056..10293328)
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AA seq
830 aa
AA seq
DB search
MAPLSARKRRGPRGTGEQRREVTLPMPPLPAFPTAEDKDDATAEDTQAMVRAQNKKKKSG
GFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILRGRDVVAMARTGSGKTACFLLPMFE
RLKAPSPSGARALILSPTRELALQTLKFTKELGKFTGLKTALVLGGDKMEDQFAALHENP
DIIIATPGRLVHVAVEMNLKLQSVEYVVFDEADRLFEMGFAEQLQEILARLPGSHQTVLF
SATLPKLLVEFARAGLTEPMLIRLDVESKLSEQLKLAFFHVRGDDKPAVLLHLLRSVVKP
QDQTVVFVATKHHTEYLKELLTSQGICCTHIYSSLDQTARKINIAKFAHGKCPVLLVTDV
AARGLDIPMLDNVINYSFPAKSKLFLHRVGRVARAGRSGTAYSLVAPDEMPYIFDLHLFL
GRPLILAGAQEMPADADGVLGRVPQSLVDDEECLLLTDHEGSLELQSLRRVADNAQKQYL
RSRPGPSPESIKRVKEMDTSQLGIHPLFSARFEDTELERLKLVDSIKAYKSKATIFEINA
TARTLASSIMRSKRRHDHALIEKFQRGQEEKRAAALRGQGLHPATPKPEEEEEGEEENLQ
EVFSTVVGRKRKRSQAAEDAARKKPQLPAQRDEDFYIPYRPKDFESERGLSVGGEGSAFE
QQAAGAVLDLMGDESHNLNRSKQLLKWDRKKKRFVGQTGQEEKKKVRTESGRYISSSYKN
NLYEKWKQKYKVDERDDDEDNQGGREQYRGKHKRGHASRQPPAQGKVRSELKNKQQILKQ
RKAAAKQRFLQRGGLKRLKARNRQRVQELRQMAFGRRVGATKKGKLRKKM
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctgagtgctcgcaagcggcgcggaccgagggggaccggggaacagcgtcgg
gaggtgacgctccccatgcccccgctgccagccttccccaccgctgaggacaaggacgat
gccaccgctgaggacacgcaggccatggtgcgggcgcagaacaaaaagaagaaatccgga
ggcttccagtccatgggcctgagttaccctgtcttcaagggtgtgatgaagaagggctac
aaggtgcccacacccatccagaggaagaccatcccggtgatcctgcgtggccgcgacgtg
gtagcgatggcgcggacgggcagcgggaagacggcttgcttcctcctgcccatgttcgag
cggctgaaggcacccagcccgtctggagcacgcgccctcatcctctcgcccacacgtgaa
ctggccctgcaaaccctcaagttcaccaaggagctgggcaagttcacaggtttgaagact
gctcttgtgctgggaggagacaagatggaggatcagtttgctgcgctacatgagaacccc
gacataatcatcgccacccctgggcgcctggtgcacgtggcagtggaaatgaacctgaag
ctgcagagcgtggagtacgtggtgttcgacgaggccgacaggctcttcgagatgggcttt
gcagaacagctccaggagatcctcgctcggctgccgggcagccaccagaccgtcctcttc
tcagccacactgcccaagctcctcgttgagttcgcccgtgctggtctcaccgagccaatg
ctgatccgtctggatgtggagtcaaagctcagtgagcagctcaagctggctttcttccat
gtgcgtggagatgacaaaccggctgtgctgctccacttgctccgcagcgtggtgaagccc
caggatcagacagttgtctttgtggccacgaagcaccacacggagtatctcaaggagcta
ctcacgtcccagggcatctgctgcacccacatctacagctcgctagaccagactgctcgc
aagatcaacattgccaagtttgcccatggcaagtgcccagtgctgctggtgacagacgtg
gccgcccgtgggcttgacatccccatgctggacaacgtcatcaactacagcttccctgcc
aagtccaagttgttcctgcaccgtgttggtcgcgtggcccgggctggccgcagtggcact
gcctactcgctggtggctcccgacgagatgccctacatctttgacctccacctcttcctg
gggcgcccgctcatcctcgctggtgcccaggagatgcctgcagatgcagatggggtcctg
ggtcgcgtcccgcagagcctggtggatgacgaggagtgcctgctgctgacagaccacgag
ggctcactggagctgcagagcctgcgccgcgtggctgacaatgcccagaagcagtacctg
cgctcccggcccggcccttcccccgagtccatcaagagggtgaaggagatggacacgtct
cagctgggcatccacccgctcttcagtgctcgcttcgaagacaccgaattggagaggctg
aagttggtggacagcattaaagcctacaagtccaaggcgaccatctttgagatcaacgcc
acagcccgcacgttggccagctccatcatgcgctccaagcggcggcacgaccatgccctc
atcgagaagttccagcgcgggcaggaggagaagcgggcagcagctctcaggggacagggg
ctgcatccagccactcccaagcctgaggaggaggaggaaggagaagaggaaaacctccag
gaggtgttctccaccgtggtgggacggaagcgcaaacggagccaggctgcagaagatgct
gccaggaaaaagccgcagctgccggcacagcgggacgaggacttctacatcccatatcgg
cccaaggacttcgagagcgagcgggggctgagcgtgggcggtgagggcagtgccttcgag
cagcaggcggctggggctgtgctggatctcatgggcgacgaaagccacaacctgaacagg
agcaagcagctgctgaagtgggaccgcaagaagaagcgttttgtggggcagacaggccag
gaggagaagaagaaagtgcggacggagagcgggcgctacatcagtagctcctacaagaac
aacctctatgagaagtggaagcagaaatacaaggttgacgagcgggacgacgacgaagac
aaccaaggaggccgggagcagtacagagggaagcacaaacgtgggcacgcctcccggcag
ccccccgcccagggcaaggtgcgctcagagctgaagaacaagcagcagatcctgaagcag
cgcaaggcagcggccaagcagcgcttcctgcagcgcgggggcctcaagcgcctgaaggct
cggaaccggcagcgggtgcaggagctgcgacagatggcgttcggccgccgggtcggggcc
accaagaagggaaagctccggaagaagatgtag
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