Numida meleagris (helmeted guineafowl): 110406891
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Entry
110406891 CDS
T06015
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel04510
Focal adhesion
nmel04512
ECM-receptor interaction
nmel04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110406891 (TNC)
04518 Integrin signaling
110406891 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110406891 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nmel00536
]
110406891 (TNC)
Glycosaminoglycan binding proteins [BR:
nmel00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110406891 (TNC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
Pur_ac_phosph_N
DUF7949
Fn3_VIN3
EGF
NDNF
EGF_PEAR1L
Interfer-bind
hEGF
DUF4998
FN3_Tor_3rd
EGF_TGFA-like
Fn3_R-PTP-O
SPE9_EGF_3rd
Filamin
Big_5
Motif
Other DBs
NCBI-GeneID:
110406891
NCBI-ProteinID:
XP_021269633
LinkDB
All DBs
Position
16:complement(2443170..2604457)
Genome browser
AA seq
1807 aa
AA seq
DB search
MGLPSQVLACAILGLLYQHASGGLIKRIIRQKRETGLNVTLPEDNQPVVFNHVYNIKLPV
GSLCSVDLDTASGDADLKAEIEPVKNYEEHTVNEGNQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEGLVSSLREQCASGAGCCPNSQTAEGRLDTAPYCSGHGNYSTEICGCVCEP
GWKGPNCSEPACPHNCFNRGLCVRGKCICEEGFTGEDCSQAACPSDCNDQGKCVDGVCVC
FEGYMGPDCGEELCPRGCSVHGRCVGGRCVCHEGFTGEDCSEPLCPNNCHNRGRCVDNEC
VCDEGYTGEDCGELICPNDCFDRGRCVNGTCFCEEGYTGEDCGELTCPNNCNGNGRCENG
LCVCHEGFVGDDCSQKRCPKDCNNRGRCVDGRCVCHEGYLGEDCGELRCPNDCHNRGRCV
DGQCVCDDGFIGEDCGELRCPNDCHNRGRCVNGQCECHEGFIGEDCGELRCPNDCRSHGR
CVNGQCVCDEGYTGEDCGELRCPNDCHQRGRCVEGRCVCDNGFTGEDCGELSCPNDCHQH
GRCVDGRCVCHEGFTGEDCRERSCPNDCNNVGRCVEGRCVCEEGYMGIDCSDVSPPTELT
VTNVTDKTVNLEWKHENLVNEYLVTYVPTSSGGLDLQFTVPGNQTSATIHELEPGVEYFI
RVFAILKNKKSIPVSARVATYLPAPEGLKFKSVRETSVQVEWDPLSISFDGWELVFRNMK
KDDNGDITSSLKRPETSYMQPGLAPGQQYNVSLHIVKNNTRGPGLSRVITTKLDAPSQIE
AKDVTDTTALITWSKPLAEIEGIELTYGPKDVPGDRTTIDLSEDENQYSIGNLRPHTEYE
VTLISRRGDMESDPAKEVFVTDLDAPRNLKRVSQTDNSITLEWKNSHANIDNYRIKFAPI
SGGDHTELTVPKGNQATTRATLTGLRPGTEYGIGVTAVKQDRESAPATINAGTDLDNPKD
LEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSGKKNEVEIPVDSTSFILRGLDAGTEYN
ISLVAEKGRHKSKPTTIKGSTEEEPELGNLSVSETGWDGFQLTWTAADGAYENFIIQVQE
SDHPEETWNITVPGGRHFVNITGLKANTPYNVTLYGVIQGYRTKPLYIETMTGAHPEVGE
LTVSDITPESFNLSWTTTNGDFDVFTIEIIDSNRLLEPMEFNTSGNSRTAHISGLSPSTD
FIVYLYGISHGFRTQAISAAATTEAEPEVDNLLVSDATPDGFRLSWTADDGVFDSFVLKI
RDTKRKSDPLELIVPGHERTHDITGLKEGTEYEIELYGISSGRRSQPINSIATTVVGSPK
GISFSDITENSATVSWTPPRSRVESYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVD
YNVNIISVKGFEESEPISGILKTALDSPSGLVVMNITDSEALATWQPAIAAVDNYVVSYS
SEDEPEVVQMVSGNTVEYDLNGLRPATEYTLRVHAVKDAQKSETLSTQFTTGLDAPKDLS
ATEVQSETAVITWRPPRAPVTGYLLIYESIDGKVKEVVLEPETTSYTLPELSPSTQYTVK
LQALSRSLRSKTIQTVFTTTGLLYPYPKDCSQALLNGEVTSGLYTIYLNGDRTQPLQVFC
DMAEDGGGWIVFLRRQNGKEDFYKNWKNYVAGFGDPKDEFWIGLDNLHKISSQGQYELRV
DLRDRGETAYAVYDRFSVGDAKTRYRLRVDGYSGTAGDSMTYHNGRSFSTFDKDNDSAIT
NCALSYKGAFWYKNCHRVNLMGRYGDNNHSQGVNWFHWKGHEYSIQFAEMKMRPSSFRNL
EGRRKRA
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgggactcccttcccaggttttagcctgtgccatcttaggtttgctgtaccagcatgcc
agcggtgggctcatcaagagaattatccggcagaagcgggagactgggctcaatgtgacc
ttaccagaggataatcagcccgtggtttttaaccacgtctacaacatcaagttgcctgtt
ggctccctttgttctgtggacctggacacagcaagtggggatgcagacctgaaggcagaa
attgagcctgtcaagaattacgaggagcatacggtgaacgaggggaaccagatcgtcttc
acgcaccgcatcaacattccccgccgggcttgtggctgtgcagctgccccagacatcaag
gatctgctgagcagactggaggagctggaggggctggtgtcctccctccgggagcagtgt
gccagcggggctggatgctgtcctaattcccagacagcagaaggtcgcctggacacagcc
ccctattgcagtggacatggcaactacagcaccgagatctgtggctgcgtgtgcgagccc
ggctggaagggccccaactgctccgaaccggcctgcccacacaactgcttcaaccgcggc
ctctgcgtgcggggcaaatgcatctgtgaggaaggcttcaccggcgaggactgcagccag
gccgcctgcccgtccgactgcaacgaccaaggcaagtgcgtggacggggtgtgcgtctgc
ttcgagggctacatgggcccggactgtggcgaggagctctgcccccgtgggtgcagtgtg
cacgggcgctgtgtgggtggacgttgcgtgtgccacgagggcttcaccggagaggactgc
agtgagcccctgtgccccaacaactgccacaaccgtgggcgctgcgtggacaacgagtgc
gtctgcgatgagggctacacgggagaggactgcggcgagctgatctgccccaacgactgc
ttcgaccgcgggcgctgcgtcaacgggacctgcttctgtgaggagggctacaccggggag
gactgcggcgagctgacctgccccaacaactgcaacggcaacgggcgctgcgagaacggg
ctgtgcgtgtgtcacgagggcttcgtgggggatgactgcagccagaagaggtgcccgaag
gactgcaacaaccgcgggcgctgcgtggatgggcgctgcgtgtgccacgaggggtacctg
ggggaggactgcggggagctgcggtgccccaacgactgccacaaccgcgggcgctgcgtc
gacgggcagtgcgtgtgcgatgatggattcattggggaggactgcggggagctgcggtgt
cccaacgactgccacaaccgcgggcgctgcgtgaacgggcagtgtgagtgccacgaggga
ttcatcggggaggactgcggggagctgcggtgccccaacgactgcaggagccatgggcgc
tgcgtcaatgggcagtgcgtgtgtgatgaggggtacacaggggaggactgcggggagctg
cggtgccccaacgactgccaccagcgcggacgctgcgtggagggacgctgtgtgtgtgac
aatggcttcaccggggaggactgtggggagctgtcctgccccaatgactgccaccagcat
gggcgctgcgtcgatgggcgctgtgtgtgccacgagggcttcaccggggaagactgccgg
gaacggtcctgccccaacgactgcaacaacgtgggccgctgtgtcgagggacggtgtgtc
tgtgaggaaggttacatggggatcgactgttctgatgtgtctcctccaactgagctgact
gtaacaaatgtaacagataaaactgtaaatctggaatggaagcacgagaatctggtcaat
gagtaccttgtcacctatgtccctaccagcagtggtggcttagatctgcagttcactgta
ccaggaaaccagacatctgccactattcatgagctagagccgggtgtggaatacttcatc
cgtgtctttgcaatccttaaaaacaagaagagtattccagtcagtgccagagtagcaaca
tatctgcctgctccagaaggcctgaaattcaaatctgttagagaaacatctgtccaggtg
gagtgggatcctctgagcatttcctttgatggctgggagctggtctttcgtaatatgaag
aaggatgataatggagacataaccagcagcttgaaaaggccagagacatcatatatgcag
ccaggcttggcaccagggcaacagtataatgtatcccttcatatagtgaaaaacaatacc
agaggaccgggtctatcccgagtgataaccacaaaactcgatgcccctagccagatcgag
gcaaaagatgtcacagacaccacagctctgatcacatggtccaaacccttggctgaaatt
gaaggcatagagctcacgtatggccccaaggatgttcctggggacaggactaccattgac
ctctctgaggatgaaaaccaatattctattggaaacctgaggccacacacagaatatgaa
gtgacactcatctctcggcgaggggacatggaaagtgaccccgcaaaagaagtctttgtc
acagacttggatgctccacgaaacctgaagcgagtgtcacagacagacaacagcattact
ttggagtggaagaacagccatgcgaatattgataattaccgaattaagtttgctcccatt
tctggtggagaccacactgagctgacagtgccaaagggcaaccaagcaacaaccagagct
acgctcacaggtttgagacctggaactgaatacggcattggagtgacagcagtgaaacag
gacagggaaagtgctcctgctaccattaacgctggcactgatcttgataaccccaaggac
ttggaagtcagtgaccccactgaaaccaccctgtcccttcgctggagaagaccggtggcc
aaattcgatcgttaccgcctcacttacgttagcccctctggaaagaagaacgaagtggag
atccctgtggacagcacctcttttatcctgagaggattagacgcagggacagagtacaac
atcagtctggtggcagagaaaggcagacacaaaagcaaacccacaaccatcaagggttcg
actgaggaagaacccgagcttggaaacttatcagtgtcagagactggctgggatggtttc
cagctcacctggacagcagccgacggggcctatgagaactttatcattcaggtgcaggag
tctgaccatccagaagaaacctggaatatcacagtccctggaggacggcactttgtgaac
attacaggcctcaaggccaacacaccttataacgtcacactttacggtgtgattcaaggc
tacagaaccaaacccctttatattgaaaccatgacaggagcacaccccgaagttggtgag
ctaaccgtttccgacattactcctgaaagcttcaacctttcttggacaaccaccaatggg
gactttgacgtctttactattgaaattattgattctaacaggttgctggagcccatggag
ttcaacacctcaggcaattcaagaacagctcatatctcagggctttcccccagcactgat
tttattgtctacctctatgggatctctcatggtttccgcacacaggcaataagtgctgcg
gctacaacagaggcagaacccgaggtcgacaaccttctggtttcagatgctaccccagac
ggcttccgtctgtcctggactgcagatgatggggttttcgacagttttgttctaaaaatc
agggataccaaaaggaaatctgatccgctggaactcatagtaccaggccatgagcgcacc
cacgatataacagggctgaaagagggcactgagtatgaaattgagctctatggaattagc
agtggacggcgctcccaacccataaattcaatagcaaccacagttgtgggatctcccaag
ggaatttctttctcggacatcacggaaaactctgctactgtcagctggacccccccccgc
agccgcgtggagagctacagggtctcctacgtccccatcacaggcggcactcccaatgtt
gttacagtcgatggaagcaagacaaggacaaagctggtgaagttagtcccgggtgtagac
tacaacgttaatatcatctctgtgaaaggctttgaagaaagtgaacccatctctggaatt
ctgaaaacagctctggacagcccatcaggactggtagtgatgaacattacagactcggag
gctctggcaacctggcagcctgcaattgccgctgtggataattacgttgtctcctactct
tctgaggatgagccagaagttgtacagatggtatcaggaaacacggtggagtatgacctg
aacggccttcgacctgcgaccgagtacacactgagggtccacgcggtgaaggacgcgcag
aagagcgagaccctctccacccagttcacaacaggacttgatgctccaaaagatttaagt
gctactgaggttcagtcagaaacagctgtgataacttggaggcctccgcgcgctcctgtc
actggttacctcctgatctacgagtccattgacggcaaagtcaaggaagttgtcctagag
cccgagacgacctcctacactctgccagagctgagcccatctacccagtacacagtgaaa
ctccaggcactgagcagatcactgaggagcaaaacgatccagaccgttttcaccacaact
ggtcttctttatccttatcctaaagactgctcccaagctctcctgaatggggaggtcacc
tctgggctctacactatttacctgaatggagacaggacacagcctctgcaagtcttctgc
gacatggctgaagatggaggtggatggattgtgttcctgagacgccaaaatggaaaggaa
gatttctacaagaactggaagaattacgtggctggctttggagatcctaaggatgaattc
tggataggtctggacaacctccacaaaatcagctctcagggccagtacgagctgcgcgtg
gatctgcgagaccgaggcgagacggcttacgctgtgtacgacaggttcagcgtcggagat
gccaagacccggtaccggctgagggtggatggctacagcggcacagcaggtgactccatg
acctaccataatggaaggtccttctccacttttgacaaggacaatgattctgccatcacc
aactgtgctttgtcatacaagggtgcattctggtacaagaactgtcaccgagtcaatctg
atgggcagatatggtgacaacaaccacagtcagggtgttaactggttccactggaagggc
cacgaatactccatccagtttgcagagatgaagatgagaccctccagctttcgaaatctg
gaaggaagacgaaagcgagcataa
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