Numida meleagris (helmeted guineafowl): 110406928
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Entry
110406928 CDS
T06015
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel04020
Calcium signaling pathway
nmel04080
Neuroactive ligand-receptor interaction
nmel04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
110406928 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110406928 (GRIN1)
04082 Neuroactive ligand signaling
110406928 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nmel04040
]
110406928 (GRIN1)
Ion channels [BR:
nmel04040
]
Ligand-gated channels
Glutamate (ionotropic)
110406928 (GRIN1)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Rap-GAP_dimer
Motif
Other DBs
NCBI-GeneID:
110406928
NCBI-ProteinID:
XP_021269710
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Position
16:complement(757270..789746)
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AA seq
1070 aa
AA seq
DB search
MSTMRLLLLALLFSSSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKLQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVI
ILSASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESA
HISDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGSNVLTNDRKIIWPGGETEKPQGYQMSTKLK
IVTIHQEPFVYVKPTQADGTCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCID
LLIRLAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQRELRRRSKCIPEHALRTS
GIHFGYPRAVAEPDLVTPSPVGKVTLIGTKAIGEESLSAPAAERGRSPRLAAPAPWRLVL
PACANQDRKSGRAEPDPKKKATFRSITSTLASSFKRRRSSKDTPCRMVPQECQRDRLAPW
SQDSPGKLPPHSERPSAHHHPSCTASPRHIIPTAPGGDACVPHRQLLQLE
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcggctgctgctgctcgccctgctcttctcctcctctttcgcccgcgcc
ggctgcgatcccaagatcgtcaatatcggcgcggtgctgagcaccaagaagcacgagcag
atcttccgcgaggcggtgaaccaggccaacaagcggcacggcacctggaagctgcagctc
aacgccacctcggtcacgcacaaacccaacgccatccagatggctctctccgtctgcgag
gacctcatctccagccaggtctatgcaatattagttagtcaccctcctgctcccaacgat
cacctaacaccaacacccgtatcatacacagctggcttctacaggatccctgtcattggt
ctgacaacacgcatgtctatatattctgataagagcatccacctgtcctttttgcgcaca
gtcccaccgtactctcaccaggccaatgtctggtttgagatgatgagagtcttcaactgg
aatcacgtcattctgatagtcagcgacgaccacgaaggtcgtgctgcacaaaagaagctg
gagaccctcttggaggagagagaatccaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggctgagaaagtgctgcagtttgaccct
gggaccaaaaatgtgacgtcgctgctgctggaggctaaagagctggaggctcgcgtcatc
atcctctctgccagtgaggatgatgcggcaacggtgtacagatcagcagccatgctcaat
atgacgggctccggctacgtgtggctggtgggggaacgggagatttcgggcaatgccctg
cgctacgcccctgatggagtcatcggcttgcagctcatcaatgggaaaaatgaatcagcc
cacatcagcgatgcagtggcagtggtggcccaggctgtacatgacttgtttgagaaggag
aacatcactgacccaccacggggctgtgtgggcaacaccaacatctggaagacagggccc
cttttcaagagggtgttaatgtcctctaagtactcagagggtgtcaccggacgggtagaa
ttcaatgaggatggggacaggaagtttgccaattacagcatcatgaacctgcagaaccgc
aaactggtccaggttgggatttacaacggtagtaatgtcttgaccaacgaccggaagatc
atctggccagggggagaaaccgagaaacctcaaggctatcagatgtcgaccaaactgaag
attgtaacaattcaccaagagccctttgtgtatgtgaagcccacgcaagcagatgggacg
tgcagggaggaattcactatcaatggcgaccctgtcaaaaaggtcttttgcacggggccc
aacgagaccatcccaggccggcccactgtggcactgtgttgctacggcttctgcattgac
ctgctcatccgcctggctggtgtgatgaacttcacctatgaggttcacctggtggctgat
ggtaaatttggtacccaagagcgggttaacaacagcaacaagaaggagtggaatgggatg
atgggggagctgctgagtggccaggcggacatgattgtggcccccctcaccatcaacaac
gagcgggcacagtacatcgagttctccaagcccttcaagtaccagggtcttaccatcctt
gtgaagaaggaaatcccccgcagcaccctggactcattcatgcagcccttccagagcacg
ctgtggctgctggtggggctgtctgtgcatgtggtggcagtgatgttgtacctgcttgat
cgattcagcccatttggacggttcaaagtgaacagtgaggaggaggaggaagatgccctg
acactctcctcagcaatgtggttctcctggggagtcctgctgaactccggcatcggagaa
ggtgctccccggagtttctctgcccgtattctgggcatggtgtgggctggatttgctatg
atcattgtggcttcctacactgccaacctggctgccttcctggtgttggaccgtcctgag
gagagaattacgggcatcaacgacccccggctgcgcaacccctccgataagttcatttat
gccacggtgaagcagagctcggtggacatctacttccgacggcaggtggagctaagcacc
atgtacaggcacatggagaaacacaactatgagagcgcagctgaagccatccaggctgtg
cgggacaacaagctccacgccttcatctgggactcagcagtgctggagtttgaagcctca
cagaagtgcgacctggtgacaacgggggaacttttcttccgctctggctttgggatcggg
atgcgcaaggacagcccgtggaagcagaacgtctcactggccatcctcaagtcccacgag
aacggcttcatggaggatttggacaagacttgggtgaggtatcaggagtgtgattcccgt
agcaatgccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtggct
ggaggtattgttgccgggatatttttaatattcatagaaatagcttacaaaaggcataag
gacgcgcggaggaagcagatgcagctggcgtttgcggccgttaatgtgtggaggaaaaac
ctgcagagagaactgagaaggaggagcaaatgtatccccgagcatgctctacgcaccagc
gggatacattttggttacccccgtgcggtagcagagccagacctggtcactccgtccccc
gtcggcaaggtcacactcattggcacgaaagcaattggggaggaatcgttgtcagcgccc
gccgccgagcgcggccggtccccacggctcgctgcccccgcaccgtggcggctggtgctc
ccagcctgcgccaaccaggatagaaaaagtggtagagcagaacctgaccctaaaaagaaa
gccacttttaggtccatcacctccaccctggcctccagcttcaagagacgtaggtcctcc
aaggatacgccctgcagaatggtccctcaggagtgccagagagacaggctggcaccatgg
agccaagacagccccgggaagctgccaccccactctgaacgtcctagcgcccaccatcac
ccgagctgcacagcctctccgcggcacatcatccccaccgccccaggaggagatgcatgt
gttccccataggcagctcctgcaactcgaatag
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