Numida meleagris (helmeted guineafowl): 110406988
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Entry
110406988 CDS
T06015
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nmel03000
]
110406988 (RC3H2)
04121 Ubiquitin system [BR:
nmel04121
]
110406988 (RC3H2)
Transcription factors [BR:
nmel03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
110406988 (RC3H2)
Ubiquitin system [BR:
nmel04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110406988 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
110406988
NCBI-ProteinID:
XP_021269821
LinkDB
All DBs
Position
16:complement(8625298..8654388)
Genome browser
AA seq
1191 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGSVISVI
GSPEATGKMVPSTNGIANLESGVPQLIPRCADTSLRALENTKKAGKSGANGQNVSGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSGQFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFNTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSSYGSDSA
SSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGGRLTLNLLSKEIDLRNGETDYSEDCADTKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSQDDQLLNGTTVENGHPLKQHQKESMEQKRQSLGEDLVILEEQKTILPVTSCFS
QPITTSVSNASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacactgtctgtaagacc
tgcctgaacaagctccatcgcaaggcatgtcctttcgaccagactgccatcaatacagac
atcgatgttcttcctgtaaactttgcactcctccagttagttggagcccaggtacctgat
catcagacagtaaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgctagc
ttgaatcagagtgcactgagccgtccaatgcaaaggaagcttgtgacgctggtgaattgt
cagctggtagaggaagagggtcgagttagagctatgagagcagctcgatcactgggcgag
agaaccgttacagaattgatcttgcagcaccaaaatcctcagcagctttctgccaatctt
tgggctgctgtcagggcacgaggatgtcagtttctagggccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctccgcactctcaagaaaagttctggtt
ctttttgttgtgcaaaggctagaaccaagatttcctcaggcctctaaaacaagcattggt
catgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaacttaaagaagagtttcggagttacgaggctttgcggagagaacat
gatgcccaaattgttcacattgccatggaagcaggacttcgaatatcaccagaacaatgg
tcttcccttctttatggtgacttggcacataaatcacacatgcaatccattattgacaag
ctccaatctccagagtcttttgcaaagagtgtacaagaactgacgatcgtcttgcagcgc
acaggtgatcctgcaaacttaaacaggctgaggcctcatttagagctcctggcaaacata
gacccaaatccagatgcagcatctccaacatgggagcagctggaaaatgcaatggtggct
gtaaagacagtagtacatgggctggtggatttcattcagaattacagtagaaaaggccac
gaaactccacagccacaaccaaatagcaaatacaaaacaagtatgtgccgagaccttcga
cagcaagggggatgtccaagaggaaccaactgtacatttgctcattctcaggaagagctt
gaaaaataccgcttgaggaacaaaaaaatcagtgcaacagtgagaacattcccccttcta
aataaagttggcgttaatagcaccgtctcaaccactacaggaagcgtaatttctgtcata
ggaagccctgaagcaacagggaagatggtgccaagtactaatggaatagctaatctagaa
agtggtgttccccaattgatccctcgctgtgcagacacctccttgagagctctggaaaac
accaagaaggcagggaagagtggagccaatggccagaatgtttctggatcccctacagaa
tcgctccctgaaaataaaattggttctccacctaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagaagtgaattctgtgcctccaaaatccggc
cagtttgttcccagagttcctgtttaccctccacattctgataacgttcagtatttccaa
gatcccagaactcagctatcatatgaagttccacagtacccacagacaggatactatcca
ccacctccaacagtaccagctggcgtggctccctgtgttcctcgctttgtgaggtccaat
aatgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccacctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgctccagtttatgacagcaggcgcatctgg
cgcccacagatgtacccacgagatgatattattaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagacatcattacgtgagagatacaactctttggatggg
tattactctgtggcttgtcaacctccgaacgaacagaggactgtgcctttaccaagggag
ccttgtggtcacttgaagactgggtatgatgaacaattacgacggaagccagaacagtgg
gcacaatatcacacacagaaaactcctcttgtatcatcgacccttcctatggcaactcca
tctccaacgccaccttctcctctcttcagtgtagatttcaacacagagttctctgagagt
gtcagtgatttgagtggaactaaatttgaggaagatcatctctctcactattcaccgtgg
tcttgtggcacaattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattcaaatgctgtgttaatggatttggacagcggggatgttaaaaggagagtgcat
ttatttgaaactcagagaagggcaaaggaagaagatcctataatcccatttagtgatgga
ccgatcatttccaagtggggtgcaatctccaggtcatcccgcacgggttatcacacaaca
gatccaattcaggccactgcttcccaaggaagtgcaactaagcccatcagtgtatcagat
tatgttccttatgtcaatgctgttgactcaagatggagttcttatggctcagattcagct
tcatcagcacgttatgcagaacgggacagattcatagttacagatttgtctggtcacaga
aagcattccagcactggagatctattaagtattgaattacagcaggccaaaagtaactca
ttattacttcagagagaggcaaatgcactagccatgcaacagaagtggaattctctagat
gaaggcggtcgacttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
actgattatagtgaagactgtgctgatacaaagccagatcgagacattgaattggagcta
tctgcccttgatacagatgaacctgatgggcagggtgaacaaatagaagagattctggat
atacagctaggtatcagctctcaagatgatcagctgctcaatggaacaactgtagagaat
gggcatccactaaagcagcaccagaaagaatctatggaacagaagagacaaagtttaggt
gaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaacttcttgcttcagt
cagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagcacatcagtcagt
gttggcagcctcattttgaaaactgctcacattatgtctgaggataaaaatgacttttta
aagcctgttgcaaatggcaggatggttaacagctga
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integrated database retrieval system
