Numida meleagris (helmeted guineafowl): 110407220
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Entry
110407220 CDS
T06015
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03013
Nucleocytoplasmic transport
nmel03015
mRNA surveillance pathway
nmel03040
Spliceosome
nmel05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110407220 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
110407220 (ALYREF)
03015 mRNA surveillance pathway
110407220 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110407220 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmel03019
]
110407220 (ALYREF)
03041 Spliceosome [BR:
nmel03041
]
110407220 (ALYREF)
Messenger RNA biogenesis [BR:
nmel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110407220 (ALYREF)
TREX complex
110407220 (ALYREF)
Spliceosome [BR:
nmel03041
]
Complex C
Other components
EJC/TREX
110407220 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110407220 (ALYREF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110407220
NCBI-ProteinID:
XP_021270323
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All DBs
Position
17:4554169..4559046
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AA seq
255 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGGGRGGGRGGRGRGGVTRGGGPGRGGVGAGRAGGGPVRNR
PVMARGGGRNRPAPYSRPKQLPEKWQHDLFDSGFGAGAGVETGGKLLVSNLDFGVSDADI
QELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT
SQIDTQRRPAQSVNRGGMTRNRGGSGGFGGGGTRRGSRGGSRGRGRGAGRTSKQQLSAEE
LDAQLDAYNARMDTS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatggacatgtccctggacgatatcattaagcttaaccggagccagcgc
ggcggcggccggggcggcggccggggcggccggggccgaggcggcgtcacccgcgggggc
gggcccggtcggggcggcgtgggagccgggcgagcgggcggcggccccgtgcggaacagg
ccggtgatggcccggggcggcggcaggaaccggcccgcgccgtacagccggccgaagcag
ctccccgagaagtggcagcacgatctcttcgacagcggttttggggcgggtgctggcgtg
gagaccggcgggaagctgctcgtctccaacctggacttcggtgtctcagacgcggatatc
caggaactctttgcagaatttgggaccttgaagaaggcggcagtgcactacgacagatct
ggacgcagtctagggacagcagacgtgcattttgaaaggaaagcagatgctctgaaagct
atgaagcagtacaatggagtccccttggatgggcgccccatgaacattcagctggttaca
tcacagatagatacacaaaggagaccagcacagagcgtaaacagaggtggcatgaccaga
aaccgtggtggttcaggaggatttggtggtggaggtaccaggcgaggtagtcgtggcggg
agcagagggagaggcagaggggctggaagaacttccaaacagcagctctctgcagaagaa
ctagatgcacagctggatgcttacaatgccaggatggacaccagctaa
DBGET
integrated database retrieval system