Numida meleagris (helmeted guineafowl): 110407771
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Entry
110407771 CDS
T06015
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03030
DNA replication
nmel03420
Nucleotide excision repair
nmel03430
Mismatch repair
nmel03440
Homologous recombination
nmel03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110407771 (RPA1)
03420 Nucleotide excision repair
110407771 (RPA1)
03430 Mismatch repair
110407771 (RPA1)
03440 Homologous recombination
110407771 (RPA1)
03460 Fanconi anemia pathway
110407771 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nmel03000
]
110407771 (RPA1)
03032 DNA replication proteins [BR:
nmel03032
]
110407771 (RPA1)
03400 DNA repair and recombination proteins [BR:
nmel03400
]
110407771 (RPA1)
Transcription factors [BR:
nmel03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110407771 (RPA1)
DNA replication proteins [BR:
nmel03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110407771 (RPA1)
DNA repair and recombination proteins [BR:
nmel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110407771 (RPA1)
MMR (mismatch excision repair)
110407771 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
110407771 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
DUF4939
IBR
Motif
Other DBs
NCBI-GeneID:
110407771
NCBI-ProteinID:
XP_021271518
LinkDB
All DBs
Position
18:5504719..5526483
Genome browser
AA seq
614 aa
AA seq
DB search
MSVGLSEGAIAAIMQGENVFRPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQ
LNPLVEEERLSAHCICQINRFIVNSLKDGRRVVILMDLDVLKTADMVGGTVGNPVPYNEG
QGQQRSSAPTASTAPSKPQQQNGNLSAAGSAAPKYHAPSNQFSKASASSSVKTPGGTQCK
VVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQAD
KFFPLIELNKVYYFTRGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFDFV
SISDLENTPKDSIVDVIGICKSYEDVTKIVVKASNREVSKRNVHLMDTSGKLVTATLWGN
EAEKFDGSRQPVIAIRGARVSDFGGRSLSVLSSSTVVVNPDSPEAFKLRGWFDSEGQLLE
CASISDVRGGSASGVSTNWKTLSEAKSERLGQGDKADYFSCVGTIVHLRKENCMYQACPS
QDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADSLDYQWVTCFQESAEFILGQS
ATFLGELKEKNEQAFEEVFQNANFNTYEFKIRVKLETYNDESRIKATALDVKPVNYREYS
KRLIASIRRNAQLG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggggctgagtgaaggcgccatcgcggccataatgcagggggagaacgtcttc
aggcccgtgctgcaagtcatcaacacccgggctatcgccacgggaaatgggcctccgcgg
taccgagtgctgatgagcgatggggtgaacactctctcctcattcatgttggcgacacag
ctgaacccccttgtggaagaggaacgcttatcagcacactgtatttgccagattaacaga
ttcattgtcaacagcttgaaagatggaaggagagtggttatactgatggatttagatgtt
ctgaaaactgctgatatggttggtgggactgtcggcaatccagtgccgtacaacgaaggg
cagggacagcaacgttcttcagctccaacagccagcacagcacccagcaaaccacagcaa
cagaatggcaatttatcagcagcaggttctgctgctccgaagtaccacgctccctcaaac
cagtttagtaaagccagcgcttccagctcagtgaagacaccagggggaacgcagtgcaaa
gtagtgcccattgccagcttgaatccataccaatctaagtggaccatttgtgctcgtgtt
acccaaaaagggcagatccgcacgtggagcaactctcgtggtgaagggaagctcttctct
atcgagctagttgatgaaagcggtgagattagagctactgcattcaatgatcaagcagac
aagttcttccctctcattgaactgaacaaggtatattattttaccagaggcaatttgaag
actgctaacaagcaatatacagctgttaagaatgattacgagattacattcactaatgag
acttcggttgtgccctgtgatgatgcccagcaccttccatctgttcagtttgattttgta
tccatctctgacttggagaacacacccaaagactcaattgtcgatgtaattggaatttgt
aagagctatgaagatgtcactaaaattgtggtgaaagctagcaatagggaggtatcgaag
aggaatgtgcatctgatggatacatcagggaaactggtgacagcaacgctatggggaaat
gaggctgagaagtttgatggttctagacaacctgtgatagccatcagaggagcccgagtc
tctgattttggtggtagaagcctgtctgtcctgtcatcgagtacggtggttgtcaaccct
gatagcccagaggcttttaagctccgaggatggtttgactctgaggggcagcttctggaa
tgtgcctccatctctgatgtgagaggtgggtcggcgtcgggagtaagtaccaactggaaa
actttgtccgaagccaaatcggagaggttgggacaaggagataaggcggattattttagc
tgtgtgggcacaatagtacatctgcgcaaagagaactgcatgtaccaggcctgtccctct
caggattgcaacaagaaagtgatagaccagcagaatggactgtatcgttgtgagaagtgc
gatcgcgaattccccaacttcaagtaccgcatgatgctcctggtgaccattgcagactct
ctagattatcagtgggtgacttgcttccaggagtcagcagaattcattcttgggcaaagc
gctactttcctgggagagctgaaggaaaagaacgagcaggcgtttgaagaagtctttcag
aatgcaaatttcaacacgtatgagttcaagatcagagtaaaactggagacgtacaatgac
gaatctcgtattaaggctacagcactggacgtcaaacctgtaaactacagggaatacagc
aagaggttgatcgcgagcatcaggagaaatgctcagctaggatga
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