Numida meleagris (helmeted guineafowl): 110407921
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Entry
110407921 CDS
T06015
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel04142
Lysosome
nmel04144
Endocytosis
nmel05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110407921 (CLTC)
04142 Lysosome
110407921 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
110407921 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nmel04131
]
110407921 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nmel04147
]
110407921 (CLTC)
Membrane trafficking [BR:
nmel04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
110407921 (CLTC)
Exosome [BR:
nmel04147
]
Exosomal proteins
Proteins found in most exosomes
110407921 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
110407921
NCBI-ProteinID:
XP_021271805
LinkDB
All DBs
Position
18:7435686..7465845
Genome browser
AA seq
1675 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKKECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLR
KEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaatcctgccgatccgcttccaggagcacctccagctccaaaatctgggcatc
aacccagcaaacattgggttcagcactctgacgatggagtcggacaaattcatctgcata
agggagaaagtaggagaacaggctcaagtggtgatcattgacatgaatgaccccagcaac
ccaattcgaagaccaatttcagctgacagtgctatcatgaaccctgccagtaaagtcatt
gcgttaaaagctgggaaaacgcttcaaatatttaacattgaaatgaagagcaaaatgaag
gctcatacaatgacagatgacgtcaccttctggaagtggatctctctgaatactgttgcc
cttgtaacggataatgcagtctaccattggagtatggagggggagtcccagcctgtgaag
atgtttgatcgccactctagtcttgctggctgccagatcatcaactaccgtactgatgcg
aagcagaaatggctgctgctaactggcatatctgcacagcaaaaccgtgttgtgggagca
atgcagctctattctgtagacagaaaagtatcgcagccgatcgaagggcatgcagctagc
tttgcgcagttcaagatggaaggaaatgctgaagaatccactctcttctgttttgcagta
agagggcaagctgggggtaagctgcatatcatcgaggttggcacaccaccaactgggaat
cagccattcccaaagaaagcagtggatgtcttctttcctcctgaagcacagaatgacttt
cctgttgcgatgcagatcagcgacaagcatgatgtggtgtttctgataacaaaatatggg
tacatccacttgtatgacctggaaactggcacctgtatctacatgaacagaatcagtgga
gagaccatatttgttactgcacagcatgaagcaacagctggaattataggagtaaacagg
aaaggacaagtgctctcagtgtgtgtggaagaagagaatattattccttacatcacaaat
gtgctgcagaatcctgacctagctttacgaatggctgtccgcaacaacctggctggagct
gaggaactttttgccagaaaattcaatgcattgtttgcacaagggaactattcagaggca
gcaaaagtggcagctaatgccccaaagggaattctgcgtactccagacaccatacgccgt
ttccagagtgttccagcacagccaggacagacttcccctttactccagtattttggtatt
ctgcttgaccaagggcaactgaataagtacgagtctctggaactttgcagaccagtgctt
cagcagggacgcaagcaacttctggaaaaatggttaaaggaagataagctggagtgctca
gaggagctgggagaccttgtgaaatctgtagaccctacgctagcacttagtgtctatctg
agagccaatgttccaaacaaagtcatccagtgttttgctgaaacaggacaagtccagaag
attgttttgtatgctaagaaggttggatatactccggactggattttcttgctgaggaac
gtaatgagaatcagccctgatcaaggacagcagttcgcccaaatgcttgttcaagatgaa
gagcctcttgcagacattacacaaattgtggatgtttttatggaatataacttaattcaa
caatgtacagccttcttactggatgcactgaagaataatcggccctcagaaggtcctctg
caaacacgtttacttgagatgaacctcatgcatgcacctcaggttgcagatgctatcctg
ggaaaccaaatgtttactcattatgatcgggctcacatagctcagctgtgtgagaaagct
ggcttgctacagagagcgctcgaacacttcacagacttgtatgacatcaagcgtgcagta
gttcacactcaccttctcaatcctgagtggctagtgaactactttggctccttgtcagta
gaagattcgctggagtgtctacgtgctatgttatctgctaacattcgtcagaacctgcag
atctgtgtccaggtagcttcaaaataccacgaacagctttcgacacagtcactgattgag
ctgtttgagtccttcaagagctttgaaggtttgttttatttcctgggctctattgtgaac
ttcagccaggatccagatgtgcacttcaagtatattcaagctgcatgcaagacaggacaa
attaaagaagtagaaagaatctgcagggaaagcaactgctatgatccagaacgtgttaaa
aacttcctcaaggaagctaaactcactgaccagctgccgctcatcatcgtgtgtgatcgc
ttcgacttcgtccacgacttggtgctgtacttatatagaaacaatctccaaaaatatatt
gagatttatgtacagaaggtgaatccaagccgcctgcctgttgttattgggggactgctt
gatgtggattgctctgaagatgtgataaagaaccttatccttgtagtgagaggccagttt
tcaactgatgaacttgttgcagaagttgagaaaagaaacaggctgaaactacttctgccc
tggctggaggcaagaattcatgagggttgtgaggagcctgcaacacacaatgcgttggcc
aaaatatacattgatagcaacaacaacccggaaagatttttgcgtgagaatccttactat
gatagccgtgtcgttggcaagtactgtgagaagagggacccacacctggcctgtgtggct
tatgagcgtggacaatgcgacttggaactgatcaatgtgtgcaatgagaactctctcttc
aaaagcctttcccgctacttagttcgccgcaaagaccctgaactgtgggccagcgtactg
ctggaaagcaacccttatagaagaccactaattgaccaggttgtacagactgcgttgtca
gagacccaggatcctgaggaggtgtctgttactgtgaaggccttcatgactgcagatctt
cccaatgagcttattgaactgctggagaaaatagttctcgataactctgtattcagtgaa
cacaggaatctgcagaacctgctaattctcacggctattaaggctgatcgcacccgtgtc
atggaatacatcaatcgtctggataactatgatgctccagacatagccaatatagcaatc
agtaatgagctctttgaggaggcgtttgccatcttcaggaagttcgatgtgaacacatcg
gctgtacaggtattaatagagcacattggaaacctggatcgtgcatatgaatttgctgaa
cgctgcaatgagcctgctgtgtggagtcagctggctaaagcacagcttcagaaagggatg
gtaaaggaagcaattgactcatatattaaagcagatgatccttcctcgtacatggaagtt
gttcaagctgccaatgccagtggaaactgggaagaactggtgaaataccttcagatggca
cgcaagaaggcccgggaatcatatgtggaaacagaattaatctttgctcttgctaaaaca
aaccgtctggcagagctggaagaatttatcaatggacctaacaacgcacatatccagcaa
gttggcgatcgctgttatgatgaaaagatgtatgaagcagctaagctgttgtataacaat
gtatccaactttggccgtttagcctcaactttagttcacctgggtgaataccaggcggct
gtggatggtgctcggaaagcaaacagtactcgcacgtggaaggaggtctgctttgcttgt
gttgacggaaaagaattccgcctggcccagatgtgtggacttcatattgtagtgcatgcg
gatgagttggaagagctaatcaattattaccaggatcgcggctactttgaagagctgata
actatgttggaagcagcacttggacttgagcgagcacacatggggatgtttacagagtta
gcaattctttactccaagttcaaaccgcagaagatgagggagcacttggaactgttctgg
tccagagtcaacatccccaaggttctgagagctgcagaacaagcccatctctgggctgaa
ttggtgttcttgtatgataagtatgaagaatatgataatgccataatcacaatgatgaat
cacccaacagatgcttggaaagaaggacaattcaaagatatcataactaaggtggccaat
gtggagctgtactacaaggcagttcagttctatttggaattcaaacctctgttgctcaat
gatctgctgatggtgttgtcccctcgacttgaccatactcgtgctgtcaccttcttcaca
aaggttaaacagctacccctcgttaaaccttacttgcgctctgttcaaaatcacaacaac
aaatcagtgaatgagtccctgaacaacctcttcattattgaagaagactaccaggccctt
aggacttctatagatgcttatgacaactttgacaacatttctcttgctcaacgtttggag
aaacacgagctgatagagttccgaagaattgctgcatatctgttcaaaggaaacaatcgc
tggaagcagagtgtagaactctgtaagaaagacagactgtataaggatgcaatgcaatat
gcttctgaatccaaagatactgagttggcagaagaattgttgcagtggttcttgcaggag
aacaagaaagaatgctttggtgcttgtctctttacctgctatgatcttttaaggcctgac
gttgtcttggaaacagcgtggaggcacaacatcatggactttgccatgccatacttcatt
caggtcatgaaggaatacttgaccaaggtggataaactggatgcatcagagtccttgaga
aaggaagaggagcaagctactgaaacacaacctattgtttatggtcagccacaactcatg
ttgacagccggacccagtgttgcagttcctccacaagcaccttttggctatggctacact
gcaccaccgtacgggcaaccgcagccaggctttgggtacagcatgtaa
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integrated database retrieval system
