Numida meleagris (helmeted guineafowl): 110407946
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Entry
110407946 CDS
T06015
Symbol
SYNRG
Name
(RefSeq) synergin gamma isoform X1
KO
K25219
synergin gamma
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nmel04131
]
110407946 (SYNRG)
Membrane trafficking [BR:
nmel04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
110407946 (SYNRG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_4
Motif
Other DBs
NCBI-GeneID:
110407946
NCBI-ProteinID:
XP_021271861
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All DBs
Position
18:complement(8794514..8830806)
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AA seq
1418 aa
AA seq
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MALRAGPGAAGGGGAAGGGGAGAAGGAGAASFMFPVAGALGPPQGMIPMQQQGFPMVPVM
QSNMPGMMGMNYGSQMPPGPMAMQGGMPLGPMPATGMPYMGQASFLGMRPAAPQYTPDMQ
KQFAEEQQKRFEHQQKFLEEERKRRQFEEQKQKLRLLSSVKPKTGEKSRDDALEAIKGNL
DGFSRDAKMHPTPASHPKKPDHPTSSSHSAVSVSHSAFLDDEEFSDFIQGPIDSPRAVPQ
PTSQPFQPFHSATEAGQLLSEKAVVQPLPPAQTPVLSILHGTTGQVPYFPTSASSPNIHK
TGSSLEEKVLDNGSNESEQEQTKLKTSEVGHKASAAGQAHPSLAISDWALVGGCESGTTA
AEVHKASEQNIAIEECGVGVFPSQDPIQQMMPPWIYNDSLVPELYKKILETTLTPTGIDT
AKLYPILMSSGLPRETLGQIWALANRTTPGKLTKEELYAVLAMIAVTQRGIPAVSPDMLN
QFPAAPVPTLSGFPMPLPATVSQQPLLPAGPPVSMPLSMGPPVMGMGITAAAPAGGAAAP
PAGAFVPSYPPSQVAKPEDDDFQEFQDASKSGSLDDSFTDFQGDGAGSSKASSSQHQSSV
PSLLMPLPGNKTLPSTDKYAVFKGIAAEKPESTATFGDSGDKYSAFRELEQPSESKYGGE
NLAEFKAAGTDDGFTDFKTADSISPLEPPTKDKTFPTSFPSLPAQSKQQTQAKTSLNLAD
LDLFSSTGENKQLSFPPAFNASKPSSIPPPPSTAAQPAPSKSSSLADEFGEFNLFGEFSN
SASASGQDDFADFMAFNNSSGFSEQKPDDKYNALKPESSPVPQPGSAVSTVRSGQSSAPA
ATPTKYDIFKQLSLEGSGAGFEETKDSTLSSVKSDDDFADFHSNKFSSVCSSADKSLVDK
VAAFKQAKEDSASVKSLDLPSIGGSSVGKEDSEDALSVQFDMKLTDVEGDLKHVMSDSSL
DLPTVSGQHPPAADIDELKCAPFGSCNSGSAVSSLASYDWSDKDDIQQGKKFSFTQASGS
GSSAATSVLQKKETLFGSSENITMTTVSKVTTFSSEDALQDVSFAAFANFKDSGPISSGP
SDDDNGDFGEFARPSSEARDAAADPNQEADFLAGGISSEMQRESTDDFGEFQSEKPKISK
FDFLVATSQGKVKSSEEMIKSELATFDLSVQGSHKRSLSLGDREISRSSPLPALEQPFRD
RSNTLSEKPALPVIRDKYKDLTGEVEESERYAYEWQRCLESALQVIKKANDTLNGISSSS
VCTEVIQSAQGMEYLLGVVEVYRVTKRVELGIKATAVCSEKLQQLLKDIDKVWNNLISFM
SLAALTPDENSLDFSSCMLRPGIKNAQDLACGVCLLNVDSRSKKEEKPVEELPKKAFNSE
TDNFKLAYGGHQYHASCANFWINCVEPKPPGLILPDLL
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgggccgggcccggcgcggcgggcggcggaggagcggcgggaggcggcggg
gccggagctgcgggaggcgcgggggcagccagcttcatgtttcccgtggcaggcgctttg
ggcccccctcaagggatgattccaatgcaacagcaaggatttccaatggttcccgtcatg
cagtccaacatgccgggcatgatgggaatgaattatggctctcagatgcctcctggaccc
atggccatgcagggtggcatgcccttagggccaatgccagccactggaatgccttacatg
ggacaggcttccttcttaggaatgcgcccggcagccccgcagtatacccctgacatgcag
aagcagtttgcagaggaacaacaaaagaggtttgagcaccagcagaagttcttagaagaa
gaacgaaagcggcgccagtttgaagagcaaaagcaaaagctgaggctcttaagcagtgtg
aaacctaagacaggtgaaaagagcagagatgacgcactggaggctattaaaggaaatctg
gatggtttttctagagatgctaaaatgcatccaacaccggcatcgcatccaaaaaagcca
gatcatcccacatcatcatcccattctgctgtatctgtttcccactctgcttttctcgat
gatgaagaatttagtgactttatacaagggcctattgacagccccagagcagtgcctcag
cccacctctcagccttttcagcctttccattctgccactgaggctggacaactgctttca
gaaaaggctgtggtccagcctctccctccagcccagactccagtgttatccatcctgcat
ggtacaactgggcaggttccctattttcctacctctgcatcttcacccaatatccataaa
acaggctcttccttggaggagaaagtcttagataatggctcaaatgaatctgaacaagag
caaaccaaacttaaaacatccgaagttgggcacaaagcctcggctgcgggccaagctcat
cccagtctagccatcagtgactgggctcttgtaggtggatgtgaaagtggtaccactgct
gcagaggtgcacaaggcttcagaacaaaacatagcaattgaagagtgtggagttggagta
ttcccttcccaggacccaattcagcaaatgatgcctccttggatttacaacgatagtttg
gtcccagaattgtataagaaaattttagagacaactttgactcctactggaatagataca
gctaagctgtatcccattctgatgtcatctggactgcccagagagacccttggacaaata
tgggctctagccaatcgaaccacccccgggaagcttacgaaagaagagctctacgctgtc
ctggcgatgatagcagtaactcagagaggaatacctgcagtgagtcccgacatgttaaac
cagtttccagctgcccccgtccccactttgtctgggtttccgatgccgctgcctgccaca
gtgagccagcagcccctgctgcccgcggggccgcccgtctccatgcccctgagcatgggg
ccgcccgtgatgggcatgggcatcacggcagcagcaccagcgggcggagctgcagcacca
ccagcaggagcttttgtgccctcctacccacccagccaggtagcaaaaccagaagatgat
gacttccaagagtttcaggatgcttcgaagtctggctccctagatgactctttcactgat
ttccaaggggatggagctggctcctccaaagcatccagctcgcagcaccagagcagtgtt
ccttctttactaatgccactcccaggtaacaagacactcccatcaactgataagtacgct
gtgtttaaaggaattgcagctgagaagcctgaaagtacagctacttttggagattctgga
gacaagtacagtgctttccgtgaattggaacagccatcagagagcaagtacggaggagag
aaccttgcagaattcaaggctgcaggaaccgatgatggcttcacagattttaaaaccgct
gacagtatctcgccgttagagccgcctacaaaagacaaaacttttcccacatccttccct
tctttacctgcccagtcaaaacagcaaacacaagcgaagacctctttgaatctagcggac
ttggaccttttttcctctactggagaaaacaagcagctgtcctttccacctgcgtttaat
gcttcaaaaccatcctccattccgccaccaccatccaccgctgcccagccagcacctagc
aaaagctcaagcttagctgatgagtttggagagttcaacctttttggggaattttctaat
agcgcatcagccagtggacaagatgactttgcagatttcatggctttcaacaatagcagt
gggttttctgaacaaaaaccagatgacaaatacaatgcacttaagccagagagcagcccc
gttcctcagcctggctcagctgtcagcacagtgaggagtgggcagagctcggcccccgcc
gctacgcccaccaagtacgacatcttcaagcagctctctctggaaggctctggagcaggc
tttgaggagacgaaggacagcacgctttcctcagtgaagagcgatgatgattttgccgat
tttcactcaaacaagttttcttccgtgtgcagcagcgcggataagtccctggtggacaaa
gtcgcagcttttaagcaggccaaagaagactccgcttcggtgaagtctctggatctcccc
tctattggtggcagcagcgttggcaaggaggattctgaagatgcgttgtctgttcagttt
gacatgaaactgactgatgtggaaggagatcttaagcatgtcatgtctgatagctctttg
gatttgccaacagttagtggccagcatcctccagcagcagatatagatgaattaaaatgt
gccccatttggaagctgtaacagcgggtccgcagtcagcagcctggcaagctatgactgg
tccgacaaagatgacattcagcagggcaagaagttctccttcacccaggcttcaggaagt
ggatcctctgcagctacttctgttcttcagaagaaggagaccttgtttggcagctcagaa
aacatcaccatgacaactgtttccaaagtgacgacgttttctagtgaggatgctttacag
gatgtttcatttgcagcctttgcaaactttaaagactccggaccaatatccagtggtcca
agtgacgatgacaacggagacttcggtgagtttgcgagaccttcgtcagaagcacgagat
gcagcagctgacccaaaccaagaggcagacttcctcgccggtgggatctcttctgaaatg
cagagagagtccacagatgactttggagaattccaaagcgaaaagccaaaaatcagcaaa
tttgacttcttagtggcaacatcccaaggcaaggtgaaatccagtgaagaaatgatcaag
agcgagctagcaacctttgacctgtctgttcaagggtctcataaaaggagcctaagcctg
ggtgacagagaaataagccgctcctcacctttaccagctctggaacagccattcagggat
cgctcaaatactctgagtgagaagcctgctctgcctgtcatccgggacaaatacaaagac
ctaactggggaggttgaggaaagtgagaggtacgcatatgagtggcagaggtgcctggag
agtgccctgcaggtcataaagaaagcaaacgataccttgaatggaataagcagctcatcc
gtttgcactgaggttatccagtctgctcaaggcatggagtatttactgggagttgttgaa
gtctacagagtaacaaagagagttgaactgggaatcaaagcaactgctgtttgtagtgag
aaactccaacagctgctgaaggatatagataaagtgtggaacaacctcataagcttcatg
tcgcttgctgctttaacgccagatgaaaactcactggatttctcttcttgtatgctgcgc
ccagggattaaaaacgcccaagaccttgcctgtggagtgtgcctcctaaatgtggattcc
agaagtaaaaaagaagagaaacctgtggaagagcttcctaaaaaagcctttaattcagaa
acggataattttaagctggcgtatggagggcaccagtaccatgcgagctgtgcaaacttc
tggatcaactgtgtggaaccaaagcctccaggtctcattttgccagacctgctctga
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