Numida meleagris (helmeted guineafowl): 110408055
Help
Entry
110408055 CDS
T06015
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03250
Viral life cycle - HIV-1
nmel04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110408055 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
110408055 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmel03400
]
110408055 (SAMHD1)
DNA repair and recombination proteins [BR:
nmel03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110408055 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
HD_assoc_2
PDEase_I
Nse5
Pdc1_Ge1
I-TevI_DNA-bd
Motif
Other DBs
NCBI-GeneID:
110408055
NCBI-ProteinID:
XP_021272105
LinkDB
All DBs
Position
19:complement(639460..666133)
Genome browser
AA seq
614 aa
AA seq
DB search
MGSPAAAWGAAPAKRARCEGFAENSRGSAADGDPRLWDTERLCQHLSRSGVGEPGLLRRF
RESGVTGAMLLDLPACALRITRACLPDERLKVLACLNQLRQTVDIMKVFNDPVHGHIEIH
PLLVRIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSLGVGYLAGCLVRELKERQPEL
DITQRDILCVEIAGLCHDLGHGPFSHMFDGRFIPLAREGLNWKHETASVEMFEHLITSNN
LEEVMKKYGLVLEEDMTFIKEQIGGPIDETTCEKSWPYRGRPKEKSFLYEIVANKKNGID
VDKWDYFARDCHHLGIQNNFDYRRLIKFTRVCEAGNQKHICARDKEVGNLYDMFHTRNCL
HRRAYQHKVGNIIEIMITEAFQKADRFFQIEGSEGRLYQISTAMEDMEAYTKLTDNIYLE
ILHSSRPELSEAREILHKIERRELYKFLGETQPEKVNEIPKDEYDGLAADIANSKPEMDP
PNVELTAEDFIVDVVNMDYGMKDQNPIDNVLFYCKADPSKAIKISKEQVSRLLPGTFSEQ
VIRVYCKHQDQVIVSAAKQYFVQWCINRDFTKPQDGDVIAPHLTPLKQSWNNRSGDEYVT
ASEPSCKQKLSFNK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcccggcggcggcgtggggcgcggctcccgccaagcgcgcgcggtgcgagggc
ttcgccgagaactcccggggctccgcggccgacggcgacccgcggctgtgggacacggag
cggctctgccagcacctctcgcgcagcggcgtgggcgagcccggcctgctgcgccgcttc
cgagagagcggcgtcaccggggccatgctgctggacctgcccgcctgcgcgctgcggatc
acccgcgcctgcctcccagatgagagactgaaagtgctcgcctgcctgaaccagctgaga
cagacagtggacatcatgaaggtttttaatgatccagttcatgggcacattgaaatacac
cctcttcttgttcgcatcattgacacgcctcaatttcagcgcctgcgatacattaagcag
ctgggtggcacttactttgtttttccaggagcctctcacaaccgctttgaacactcgtta
ggcgtgggctaccttgcgggatgtctggttcgtgaactgaaggagcggcaaccagaactg
gatataacccaacgagacatcctctgtgtggaaattgctgggctttgtcacgatttgggt
catgggccattttcgcacatgtttgatggaagatttattccacttgctcgtgaaggtttg
aactggaagcatgaaactgcttctgttgaaatgtttgagcacctgatcacatccaataat
ctagaagaagtcatgaaaaagtatggtctcgtcctggaggaagacatgaccttcatcaaa
gaacagataggagggcctatagatgaaacaacttgtgagaaatcgtggccctaccgagga
cgaccaaaggagaagagtttcctatatgagatagtagcaaacaagaaaaatggcatcgat
gttgacaaatgggattattttgcaagggattgccaccacctagggatccaaaataatttt
gattataggcggttaattaaattcactcgtgtttgtgaagcgggaaaccagaagcacatc
tgtgcccgtgacaaggaagttgggaatttgtatgacatgttccacacacgaaattgcctg
caccggcgagcgtaccagcataaggttggcaacatcattgaaataatgattacagaagcc
tttcaaaaagcagaccgtttttttcaaatagaaggctctgaaggaagattgtaccagatt
tctacagcgatggaggacatggaagcctacactaagctgactgataatatctacctggaa
attctgcactcaagtcgtccagaactgagcgaggcacgagaaattttgcataaaatagaa
cggcgtgaattatacaagtttttaggagagactcaacctgaaaaagtgaatgaaattcca
aaggatgaatatgatggcctggcagctgacattgctaactccaagccagaaatggatcct
ccaaatgtggagctaacggctgaggacttcatagttgatgttgtcaatatggattatgga
atgaaagatcagaaccccattgataatgttctcttctactgcaaggctgatccttctaag
gccatcaagatcagtaaagaacaggtttcaaggcttttaccagggaccttttcagagcag
gttatccgggtttattgcaagcatcaggatcaggttattgtttcagctgcaaaacaatat
tttgttcagtggtgtataaacagggatttcaccaaaccacaggatggtgatgtgattgcc
cctcatctgactccactgaaacaaagctggaataacagaagtggggatgaatacgtgaca
gcttcagaacccagctgcaagcagaagctttctttcaataagtaa
DBGET
integrated database retrieval system
