Numida meleagris (helmeted guineafowl): 110408520
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Entry
110408520 CDS
T06015
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nmel03037
]
110408520 (NPHP4)
Cilium and associated proteins [BR:
nmel03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
110408520 (NPHP4)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
110408520
NCBI-ProteinID:
XP_021272983
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Position
20:703262..728111
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AA seq
1402 aa
AA seq
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MPAAGGDPWGEMAEWERLFAWSRAVPPHAQRRHGVPERSVPFQCVLKCLEGSVVTQRSPA
ELQLRLSLFDAAHRYFFGHTWHGSARTPQGSPAGQPPRVLFNEAVYFHTSLSHPSIMAVV
EVVAVTPSPEGLSRDVSCGFGLIPLFDSRREPSDLAAKDRALKLYHGTPRALLHPLLQDP
LEKNKYMTVMENSHLQYTLKPHPPLETIFHLLPENLLVSGLQKIPGLLPAHGDTGDSFLK
PRLMGTAPCYLDQLCIRLHPSLEEFEEELLEQLSSDRLLKEVGSTLWVQERRLRVGVHNG
LRFVQAPQVAVLQPAAEVARGQASSPTDSAAEQALLLRSRLQLSEMVPHAAFGVCFQLEY
VVCTGAKAAAGSALGPAAAMHTVRWALWSPFLAASSSPVQLPLRGGARPSPGQTLVYRNP
ADSESSQQVKRIASGSVQFHVCTDSEEQLVTSPDTSGRAGKEPGKPPTLSLSPGSPLRPA
ASPRGPGLSLSQLSASPRGRAEPAVPRGHSTPVPRPRGTQRDGCAEPAARHAAGITHLEA
DLRPGSPHADASGSEHLRELPFAPTQLPIAAVGLPAGSTALTRASLALLHASGFPEILDG
NKEPVEVTEPLDPARFSPRLEEADALQSNEIILQFLAFSRASQDSMEGTWPRTVFLTFQF
YRFPPVTTPRLQLVHVDGERATGSAAPAQVLLQLNKDGTPSTGAPGLQLRYMVDPTFLKP
GEQRCFVHYLAEHSLQMDVWDGDSLLLVGSAAVKLKPLLRQGRPAVRTLHELEVATTEYE
QDTPAMGRDVLQPLGVRVAVRGRLHLCLANVGHRCEETPVSPRRPPLSRTRLVPSLGGGS
LLSLHAGGGVKVSRARRLAEVDGELAATLCSHRPEQSPLPPRAPREAVAVRQRKLRRMAL
VRQQEDAGQRMPQRMGWREQRMRHLRDLQVIDAYRERIKLQCISQMLSQAITVTHTVYAM
LGTAEFFEFALKNPYSVQHTVTVEVDHPELRVILDPREWRHFKELTQTTTPLEEDMFHLR
EDLRPQVYLRPKETVHIPFRYQTFSAEPAVAAVLGPVGLSEEEDAGRMQEEPRAAQMRPI
QVAFRVSGGKPIALLRVKVEPRPHVVDQTFRFYHPELTFLKKAIRLPPWHTLPGAPVGMP
GSQPEVHVRCSDPNVICETKNMGPGEPQDVFLKVAGGPSPQIKKFFVAIYTDPWLAAPLR
IWQFYLHSLQRLDVSCTAGQLSRLAVPLRGTRTLRRVKAFCSHPHELKVDPAGVFVLPPD
GVLDLFVGVRPRRAGSRFLYLNLVDVECHQLVSSWLLCVTCRQPLISKAFEITIPAGGGR
GSNKRITYTNPYPTRRLYFLGTSRPDLLQFKEDSFEVAGGEVYTIGLRFAPSQSVGEEEI
LIHINDHEDKNEETFCVKVVYQ
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagcaggaggtgacccctggggcgagatggccgagtgggagcggctgtttgcg
tggagccgcgccgtgccgccgcacgcccagcgcagacacggtgtgccggagcgctcggtg
cctttccagtgcgtcctgaagtgcctcgagggttccgtcgtcacgcagcggtccccggct
gagctgcagctgcgcctgtccctgttcgatgccgcccaccgctacttcttcggccacacg
tggcacggcagcgcccggaccccccagggcagccccgcagggcagcccccccgtgtgctg
ttcaacgaggccgtgtacttccacacctcgctcagccaccccagcatcatggccgtggtg
gaggtggtggctgtgacccccagcccagaagggctctcccgggacgtgtcgtgcggcttt
ggcctcatcccgctgttcgacagcaggcgggagccctcggacctggctgccaaggacaga
gcgctcaagctgtaccacgggacgccgcgcgccttgctgcacccgcttctccaggaccct
ctagaaaagaataaatacatgaccgtaatggagaacagccacctgcagtacacgctgaag
ccccacccgcctttggagacgatatttcatctccttcctgaaaacctcctggtgtccggc
ctgcagaagatccctggtttgctgcctgcacacggggacacaggtgacagcttcttgaag
ccacggctcatggggacggccccctgctacctggaccagctctgcatccgcctgcaccct
tctctggaggagtttgaggaagagctgctggagcagctgagcagcgaccgcttgctgaag
gaggtcggcagcacgctgtgggtgcaggagcggcggctgcgcgtcggtgtgcacaacggg
ctgcgcttcgtgcaggccccgcaggtggccgtgctgcagccggcggccgaggtggcccgg
ggacaggccagcagccccaccgacagcgctgcggagcaggccctgctgctgcggagccgc
ctgcagctgagcgagatggttccgcacgcggccttcggggtctgcttccagctggagtac
gtcgtctgcactggggccaaggccgcggccggcagcgcgctgggcccagcagccgccatg
cacacggtgcgctgggctctctggagccccttcctggctgccagctcctccccggtgcag
ctgcccctgcgcggaggtgcccgtcccagccccgggcagaccctggtgtacaggaacccc
gcggacagcgagagctcccagcaggtgaagcgcattgcgtcgggttccgtccaattccac
gtttgcaccgattcggaagaacagcttgtgacttctccagacacctcgggtagagccggg
aaggagccggggaagcctcctacgctgtcgctgagtccaggctccccgctgcgcccggcg
gcttccccaaggggacctgggctgtctctctcgcagctgtcggcctcgccgcggggcagg
gctgagcccgctgtgccacgaggccacagcaccccagtgccccggccccgcggcacgcag
agggatggctgcgccgagccggccgcgcggcacgctgctggcatcacgcacctggaggct
gatctgcggccgggctccccgcacgcggatgcctccggcagcgagcacctgcgggagctg
ccctttgcgcccacgcagctgcccatcgcggccgtggggctgcccgccggcagcaccgcg
ctcacccgtgcctcgctggcgctcctgcacgcctctggcttcccagaaatcttggatggc
aacaaggagcccgtggaggtcacggagccgctggaccctgcgcgtttcagtcctcggctg
gaggaagcggacgctctgcaaagcaatgaaataatcctgcagttcctggcgttcagtagg
gcttctcaagactcaatggaggggacgtggccgaggacagtgttcctcaccttccagttc
taccgcttcccgccggtcaccacgccgcggctgcagctggtccacgtggatggcgagagg
gcaaccgggtctgctgcgccggcacaagtcctgctccagctgaacaaggatgggaccccg
agcactggagccccggggctgcagctgaggtacatggtggaccccaccttcctgaagcct
ggggagcagcgctgcttcgtgcactacttggctgagcacagcctgcagatggatgtctgg
gatggggactcgctgctgctcgtcggctctgctgcggttaagctgaagcccctgctgcgt
cagggccggccggctgtcaggacgctgcacgagctggaggtggctaccacggagtacgag
caggacacgccagcaatgggcagggatgtgctgcagcccctgggcgtccgcgtggccgtg
cggggccgcctgcacctctgcctggccaacgtcggtcaccgctgtgaggagacccctgtg
agcccaagacgcccaccgctgtcccgcactcgccttgtgccctcgctgggcggtggcagc
ttgctgtccctgcacgccggtgggggtgtcaaggtgtctcgggctcgcaggctggccgag
gtggatggcgagttggcggccacgctgtgcagccaccggccggagcagagcccgctcccc
ccgcgtgccccccgcgaggccgtggccgtccggcagcgcaagctgcggcgcatggcactg
gtgcggcagcaggaggatgctgggcagaggatgccacagcgcatgggctggcgtgagcag
cgcatgcggcacctgcgggacctgcaggtcatcgacgcctaccgggagcgcatcaagctc
cagtgtatctcccaaatgctcagccaggccatcaccgtcacgcacactgtgtatgccatg
ctcgggacggctgagttctttgagttcgccctgaagaacccctacagtgtccagcacacg
gtgacggttgaggtcgaccaccccgagctcagggtcatactggacccgagggagtggcgg
cacttcaaggagctgacccagacaaccaccccgctggaggaggacatgttccacctgcgg
gaggacctcaggcctcaggtctacctgcgccccaaagagaccgtccacatacccttccgg
taccagacgttctcggcagagccggctgtggcggcggtgctggggcccgtgggtctgagc
gaggaagaggatgcagggaggatgcaggaggagccaagggctgcgcagatgaggcccatc
caggtggctttccgtgtgagcgggggcaagcccatcgcgttgctgcgggtgaaggtggag
ccccggccccacgtggtggatcagactttccgcttctaccaccccgagctgaccttcctg
aagaaggccatccgcctgccgccctggcacacgctcccaggcgctccggtggggatgccg
ggcagccagcccgaggtgcatgttcgctgcagtgaccccaacgtgatttgtgaaaccaaa
aatatggggcccggggaaccacaggacgtcttcttaaaagtagctggaggaccaagcccg
cagatcaaaaaattctttgttgctatttatacggacccctggctggctgcgccgctgcgc
atctggcagttctacctgcactccctgcagcgcctggacgtcagctgcacagcggggcag
ctctcccgcctggccgtcccgctgcgcggcacccgcaccctgcgcagggtgaaggcgttc
tgctcgcacccccacgagctgaaggtggacccggcgggtgtgttcgtcctgccccccgac
ggcgtcctggacctgtttgtgggcgtgaggccgcgccgggccggcagcaggttcctctac
ctcaacctggtggacgtggagtgccaccagctcgtgtcctcctggctgctgtgcgtcacc
tgccgacagccgctcatttccaaggccttcgagatcaccatccccgcgggcggtgggagg
ggttccaacaagcgcatcacctacaccaacccctaccccacgcgcaggctgtacttcctg
ggcaccagccggcccgacttgctgcagttcaaggaggattccttcgaggttgctggtggg
gaggtgtacaccatcggcctgcgcttcgccccgagccagagcgtgggtgaggaggagatc
ctgatccacatcaacgaccacgaagacaaaaacgaggaaaccttctgcgtgaaggtcgtc
taccagtga
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