Numida meleagris (helmeted guineafowl): 110408682
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Entry
110408682 CDS
T06015
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
110408682 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nmel01009
]
110408682 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nmel04515
]
110408682 (PCDH9)
Protein phosphatases and associated proteins [BR:
nmel01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110408682 (PCDH9)
Cell adhesion molecules [BR:
nmel04515
]
Cadherins
Protocadherins
110408682 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
V_ATPase_I
EphA2_TM
RCR
DUF6249
7tm_3
DUF6377
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
110408682
NCBI-ProteinID:
XP_021273358
LinkDB
All DBs
Position
1:156859305..157049534
Genome browser
AA seq
1032 aa
AA seq
DB search
MDLREFYLLAALIACLRLDSAVAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPFSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQVNEHFYWS
ISTAYKCPINQY
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggaattttacttgttggccgctttgattgcctgtttaaggctggattct
gctgtggctcaagaacttatttacactattagagaggagctgcctgaaaacgtccccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacggggaccagtgcc
agccttgtctacagactggtgtccaaagcaggggatgcccctctggtcaaagtgtccagt
accaccggggagatctttacaacatcaaacagaatagacagagaaaaactctgcgctggc
gcttcctatgcagaagaaaacgagtgtttctttgaacttgaagtggtgattctccccaat
gacttttttaggctgatcaagataaaaataattgtgaaggatactaatgacaatgcacct
atgtttccatcccctgtcatcaatatctccataccagaaaacactctgatcaacagtcgc
tttccaatcccatcagcaacagatcccgatacaggtttcaacggtgtgcagcactatgag
ttgttgaacggacagagtgtctttggcctggatatcgtagaaactccagaaggagagaaa
tggcctcaactgattgtgcagcagaacttggatagagagcaaaaggacacctacgtgatg
aaaatcaaagtggaggatggagggaccccgcagaaatccagcacagctatcctgcaagtc
acagtaagtgatgtcaatgataacaggccagtttttaaagagagtcaagtagaggttcat
ataccagagaatgcgcctgtaggcacttctgtaattcagcttcatgctacagatgcagat
ataggaagcaatgcagaaatcagatatatttttggtgcccaagttgcccctgcgaccaaa
agattttttgctttaaacaacaccacagggctgatcacggttcagaggtccttagatcgg
gaagagactgctattcacaaagtgacagtgctggctagtgatggtagctctacaccagct
cgggcaactgtgaccatcaatgtcactgatgtaaacgataaccctccgaacatagacctc
aggtacataataagtcccatcaatggcacagtgtacttatctgagaaagatcctgtcaat
acaaagattgctctaattacggtttcagataaggacactgatgtgaatggcaaagtgatc
tgtttcattgagagagaggtccccttccacctgaaggcagtttacgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtg
gcttccgattctggcaagcccagtttgaaccagactgccctggtaagagttaagctggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccgtcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctcctttttcgatctggatcgaaag
acaggagttctgacagcctccagagtttttgacagagaagagcaggagcgtttcattttc
actgttacagcccgagacaatggcacccctcctttgcagagtcaagcagctgtaattgtt
actgtgttggatgaaaatgacaacagtccaaaatttactcataatcactttcagtttttt
gtatcggagaacctaccaaagtacagcactgtgggggtgatcacggtgactgacgcagat
gctggggaaaacaaagcggtgaccctttccatcctcaatgacaatgacaactttgtgctg
gatcccttctctggagttataaagtccaatgtttcttttgatcgagaacagcagagctcc
tacacctttgatgttaaggcagttgatggaggacaacctcctcgctcttccacagcgaaa
gtgaccataaatgtcatggacgttaatgataacagtcctgttgtcatctacccaccttct
aatacttcttttaaactagtgccactctctgcaattccaggatcagtggtagcagaagtg
tttgcagtagatatcgacaccggaatgaacgctgaactgaagtacacaatagtgagtgga
aataacaaaggtttgtttcggattgatccagtgacaggtaacatcactctggaagaaaaa
ccaactcctaatgatgtcgggctgcatcgcttagttgtcaacataagtgatttgggttat
cccaaatctttgcatactcttgtgcttgtttttttgtatgtaaatgatactgctggaaat
gcctcttatatttatgacttgatacgcaggactatggaaacacctttggaccggaacata
ggagacagtagccaaccctaccaaaacgaggactatctcacgatcatgattgctattgtg
gcaggtgccatggttgtcatagtggtgatatttgtcactgttcttgttcgctgccggcac
gcatccagattcaaagctgcccagaggagcaaacaaggtgctgagtggatgtctcccaat
caggagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctcctaagagttct
cttttgaactttgtgaccattgaggagtccaaacctgatgatgcagttcacgaacccatc
aacgggacaataagccttccagcagagctggaggagcaaagtataggaagatttgattgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgatcttgccaagcattacaaa
tctgcctctccgcagtctgcttttcatctcaaacctgacactcccgtttcagtgaaaaag
caccacgtgattcaggaactccctttggacaacacctttgttggtggctgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacaggtaaacgagcacttttactggtct
ataagtactgcatacaagtgcccgatcaaccagtattga
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