KEGG   Nocardioides mesophilus: H9L09_00600
Entry
H9L09_00600       CDS       T07004                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
nmes  Nocardioides mesophilus
Pathway
nmes03030  DNA replication
nmes03410  Base excision repair
nmes03420  Nucleotide excision repair
nmes03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nmes00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    H9L09_00600 (polA)
   03410 Base excision repair
    H9L09_00600 (polA)
   03420 Nucleotide excision repair
    H9L09_00600 (polA)
   03440 Homologous recombination
    H9L09_00600 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nmes03032]
    H9L09_00600 (polA)
   03400 DNA repair and recombination proteins [BR:nmes03400]
    H9L09_00600 (polA)
Enzymes [BR:nmes01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     H9L09_00600 (polA)
DNA replication proteins [BR:nmes03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     H9L09_00600 (polA)
DNA repair and recombination proteins [BR:nmes03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     H9L09_00600 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     H9L09_00600 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_5 DNA_pol_lambd_f HHH
Other DBs
NCBI-ProteinID: QNN53042
UniProt: A0A7G9RBR7
LinkDB
Position
complement(135172..137862)
AA seq 896 aa
MPEPADRPRLLLLDGHSLAYRAFFALPVENFSTTTGQPTNAVYGFTSMLINVLRDEQPTH
VGVAFDKSRQTFRLAEYAEYKAKRNKTPDEFKSQLPLIQEVLDALRIRHLEVEGFEADDI
IATLTTQAVAAGFDVLLLTGDRDSLQLVSEHSTVLYPMRGVSDLARMTPEAVQERYGVPP
DRYPELAALVGEDSDNLPGVPGVGPKTAAKWITTYDGLDNVIAHADQIKGKAGDSLREHL
GEVIRNRRLNALVCDMDLAITPTDLAKQPWDRQQVHQLFDGLEFRVLRERLFATLESEEE
IEEVDFDLEMRRLAAGELAGWLAEHTREGERVGVQVQGSWRAGTGEVYAVALAAGDEAAA
WVDVEQLGPEDDEVLATWLADPRRPKVLHDAKGPMLAMAARGWPLTGLDRDTALSAYLAR
PDQRSYDLADLTVRYLKRELKVADVDADQGQLSFDSVGEDAAGDTAMLHAWTVLELAAAL
DEELEERGGTRLLADVELPLVHVLAELERIGVAVDVEQLEALESHFAGEVKKAADEAFDV
IGKEINLGSPKQLQVVLFDELDMPKTKRTKTGYTTDADALQALYVKTEHPFLLHLLRHRD
VARLRQTVEGLLKTVASDGRIHTTFNQMIAATGRLSSTDPNLQNIPVRTEEGRRIREAFV
VGPGFESLMTADYSQIEMRIMAHLSEDALLTEAFRSGRDFHNVTASRVFDVDAGEVTPAM
RAKIKAMNYGLAYGLSAYGLGQQLGIEPAEARVLMDDYFETFGGIRDYLSGVVDEARRTG
FTETILGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADIIKVAMLRVDGALHESGLR
SRMLLQVHDELVLEVAPGEAGPLEELVRREMAAAAELTVPLDVSVGTGRSWHDAAH
NT seq 2691 nt   +upstreamnt  +downstreamnt
gtgccagagcctgccgaccgtccccgcctcctgctgctcgacggccactcgctggcctac
cgggcgttcttcgcgctgccggtggagaacttctccaccacgacgggtcagccgaccaac
gcggtctacggcttcacctcgatgctcatcaacgtgctccgcgacgagcagcccacccac
gtcggcgtggccttcgacaagtcccgtcagacgttccggctcgccgagtacgccgagtac
aaggccaagcgcaacaagaccccggacgagttcaagagccagctgccgctgatccaggag
gtcctcgacgcgctgcggatccggcacctggaggtcgagggcttcgaggccgacgacatc
atcgccacgctcaccacccaggcggtggccgccggcttcgacgtgctgctgctcaccggc
gaccgtgactccctgcagctggtcagcgagcactccaccgtgctctacccgatgcggggc
gtctcggacctggcccggatgacccccgaggcggtgcaggagcggtacggcgtgcctccg
gaccgctatcccgagctggctgcgctggtcggcgaggactccgacaacctgccgggggtg
ccgggggtcggccccaagacggccgccaagtggatcaccacctacgacggcctcgacaac
gtcatcgcgcacgccgaccagatcaagggcaaggccggcgacagcctccgcgagcatctc
ggcgaggtgatccgcaaccggcggctcaacgcgctggtctgcgacatggacctcgcgatc
accccgaccgacctggccaagcagccgtgggaccgccagcaggtgcaccagctcttcgac
ggcctggagttccgggtgctgcgtgagcgtctgttcgccaccctcgagtccgaggaggag
atcgaggaggtcgacttcgacctcgagatgcgcaggctcgctgccggtgagctggccggc
tggctggccgagcacacccgcgagggcgagcgcgtcggcgtgcaggtgcagggcagctgg
cgggccggcaccggcgaggtgtacgccgtcgcgctggctgccggcgacgaggccgcggcc
tgggtcgacgtcgagcagctcggcccggaggacgacgaggtgctggcgacctggctggcc
gatccgcggcggcccaaggtgctccacgacgccaagggcccgatgctggcgatggcggcc
cgcggctggcctctcaccggcctggaccgcgacaccgcgctgtcggcgtacctcgcccgt
cccgaccagcgctcctacgacctcgcggacctgacggtgcgctacctcaagcgtgagctc
aaggtggccgacgtcgacgccgaccagggccagctgagcttcgacagcgtcggggaggac
gccgcgggcgacaccgcgatgctgcacgcctggacggtcctggagctggccgcggccctc
gacgaggagctggaggagcgaggcggcacgcgtctgctcgccgacgtcgagctgccgctg
gtgcacgtcctcgccgagctggagcgcatcggggtcgccgtcgacgtcgagcagctcgag
gccctggagtcgcacttcgcgggggaggtgaagaaggcggccgacgaggccttcgacgtg
atcggcaaggagatcaacctcggctcgcccaagcagctgcaggtggtgctgttcgacgag
ctcgacatgcccaagaccaagcggaccaagaccggctacaccaccgacgccgacgcgctc
caggcgctctacgtcaagaccgagcacccgttcctgctgcacctgctgcggcaccgcgac
gtggcccggctccggcagaccgtcgagggcctgctcaagaccgtcgcctcggacggccgg
atccacaccacgttcaaccagatgatcgcggcgaccggacggctctcctccaccgacccg
aacctccagaacatcccggtccgcaccgaggagggccgccgcatccgcgaggcgttcgtg
gtcggcccgggcttcgagtcgctgatgaccgccgactacagccagatcgagatgcggatc
atggcgcacctctccgaggacgccctgctcaccgaggcgttccggtccgggcgggacttc
cacaacgtcaccgcctcccgggtcttcgacgtcgacgcgggcgaggtcaccccggcgatg
cgcgccaagatcaaggcgatgaactatggcctcgcctacggtctgtccgcctacggcctc
ggtcagcagctcggcatcgagccggcggaggcgcgggtgctgatggacgactacttcgag
accttcggcgggatccgcgactacctctccggggtggtcgacgaggcccgccgcaccggc
ttcaccgagaccatcctcggccggcgccgctacctgcccgacctgaccagcgacaaccgg
cagcgccgggagatggccgagcggatggcgctcaacgcgccgatccagggctcggcggcc
gacatcatcaaggtggcgatgctgcgcgtcgacggcgccctgcacgagtccgggctgcgg
tcgcggatgctgctgcaggtccacgacgagctcgtgctcgaggtggcgcccggggaggcc
ggcccgctcgaggagctggtgcgccgggagatggcggccgccgccgagctcaccgtgccg
ctggacgtctcggtcggcacggggcgcagctggcacgacgccgcgcactga

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