Nocardioides mesophilus: H9L09_01115
Help
Entry
H9L09_01115 CDS
T07004
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nmes
Nocardioides mesophilus
Pathway
nmes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L09_01115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmes03019
]
H9L09_01115
03400 DNA repair and recombination proteins [BR:
nmes03400
]
H9L09_01115
Enzymes [BR:
nmes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H9L09_01115
Messenger RNA biogenesis [BR:
nmes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H9L09_01115
DNA repair and recombination proteins [BR:
nmes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H9L09_01115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
TrmB
MarR_2
Asparaginase_C
DprA_WH
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
QNN53131
UniProt:
A0A7G9RC06
LinkDB
All DBs
Position
complement(256897..259023)
Genome browser
AA seq
708 aa
AA seq
DB search
MTTTTLTEARDEIATRVITAMAGPDARLREDQATAVAALCEPGARVLVVQATGWGKSAVY
WAATAIRRAENAGPTLVVSPLLSLMRDQVAAAGRAGLRAATLNSSNIDAWSAIEADLRGG
QLDVLLVSPERLANPGFGRRVLDGLAGRLGLVVIDEAHAVSDWGHDFRPDYRRVSDVLQR
LNPDTPVLATTATANARVTDDVAHQLGRDLDDGGQGEATLVLRGQLARASLELSVVDRLS
PLERYAWVVDHLPRLPGSGIVYCLTVSDAERLAAAVAEVHGDAVPVAAYTGQLEPGRREE
LEDALRDNRLKALIATSALGMGYDKPDLGFVVHVGAPPSPVSYYQQVGRAGRAIEHAHAV
LLPSDADAGVWDYFATATIPKPEQVERVLAVLSGGEPVSVAAVEAQSGVRRGRVELMLKQ
LAVDGVVDRVEGGWVATGKPWSYDAEHYDGVVAVRRREADIMRAYTRGERCLMQLLQLSL
DDPHAEPCGRCSVCRGALSEDLSGAPEPETVQAVTRLLRGQVHLLEPRKMWPGGAFGARG
RIPAEEGHEVGRTLIHADAPEWRESVAAMFGADAPAPEEVRDGAVRLLSGWRGSWSRRPE
VVVDLPAAGQRQLTASVADHIAAVGQLGRASMPVPDRLPDLRELSSADEAAFWRDAFTPG
SAPAEVAGASVLLVVDATSSLWPITVAAAALRRAGAAAVLPMLIHRRP
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccacgctgaccgaggcccgcgacgagatcgccacccgggtgatcaccgcg
atggccggtccggacgcacggctgcgcgaggaccaggccaccgcggtcgcggcgctctgc
gagcctggcgcccgggtgctggtcgtgcaggccaccggctggggcaagtcggcggtctac
tgggcggccaccgcgatccgccgtgccgagaacgccggacccacgctggtggtctcgccg
ctgctgtcgctgatgcgcgaccaggtggccgccgccggccgggccgggctgcgggcggcg
acgctgaattcctccaacatcgacgcctggtccgcgatcgaggccgacctgcgcggcggc
cagctcgacgtgctgctggtctccccggagcggctggccaaccccgggttcgggcggcgg
gtgctcgacgggctggccgggcggctcggcctggtggtgatcgacgaggcgcacgcggtc
tccgactggggccacgacttccggcccgactatcgccgggtctccgacgtgctgcagcgg
ctcaacccggacaccccggtgctggccaccaccgccaccgccaacgcccgggtcaccgac
gacgtcgcgcaccagctcggccgcgacctcgacgacggcggccagggggaggcgacgctg
gtgctgcgcggccagctggcccgggcgagcctcgagctgtccgtggtggaccggctctcg
ccgctggagcgctatgcctgggtggtggaccacctgccgcggctgcccggctccggcatc
gtctactgcctgaccgtctccgacgcggagcggctcgcggccgcggtcgccgaggtgcac
ggcgacgcggtcccggtcgcggcctacaccggccagctggagcccggtcgtcgtgaggag
ctcgaggacgcgctgcgcgacaaccggctcaaggcgctgatcgccacctccgcgctgggg
atgggctacgacaagcccgacctcggcttcgtggtgcacgtcggggcgccgccgtcgccg
gtctcctactaccagcaggtcggccgcgccgggcgcgcgatcgagcacgcgcacgcggtc
ctgctgccctccgacgccgatgccggggtgtgggactacttcgcgaccgcgacgatcccc
aagccggagcaggtggagcgggtgctcgcggtgctctccgggggcgagccggtgtcggtg
gccgcggtggaggcccagtccggggtacgccgcgggcgggtcgagctgatgctcaagcag
ctcgccgtggacggggtggtcgaccgggtcgagggcggctgggtcgcgaccggcaagccg
tggtcctacgacgccgagcactacgacggcgtggtcgcggtgcgccgccgcgaggccgac
atcatgcgcgcctacacccgcggcgagcgctgcctgatgcagctgctgcagctctccctc
gacgacccgcacgccgagccctgcggacgctgctcggtctgccgcggcgcgctgtccgag
gacctgtccggcgcgcccgagcccgagacggtgcaggcggtgacccggctgctgcgcggc
caggtgcacctgctcgagccgcgcaagatgtggcccggcggcgcgttcggggcccgcggc
cggatccccgccgaggagggccacgaggtcggccgcaccctgatccacgccgacgccccg
gagtggcgcgagagcgtcgcggcgatgttcggcgccgacgcaccggccccggaggaggtc
cgtgacggcgccgtccggctgctgtccgggtggcggggctcgtggtcgcggcgacccgag
gtggtcgtggacctgccggcggccggtcagcggcagctgaccgcgtcggtggccgatcac
atcgccgcggtgggccagctgggccgggcctcgatgccggtgcccgaccggctcccggac
ctgcgcgagctcagctccgccgatgaggcggccttctggcgcgacgcgttcacccccggc
tccgcgcccgccgaggtggccggcgcctcggtgctgctggtggtcgatgccacctcctcg
ctgtggccgatcacggtggcggcggcggcgctgcggcgggccggtgcggccgccgtactc
ccgatgctgatccaccgccgaccctga
DBGET
integrated database retrieval system
