Nocardioides mesophilus: H9L09_01365
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Entry
H9L09_01365 CDS
T07004
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nmes
Nocardioides mesophilus
Pathway
nmes03030
DNA replication
nmes03430
Mismatch repair
nmes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nmes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H9L09_01365
03430 Mismatch repair
H9L09_01365
03440 Homologous recombination
H9L09_01365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmes03032
]
H9L09_01365
03400 DNA repair and recombination proteins [BR:
nmes03400
]
H9L09_01365
Enzymes [BR:
nmes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H9L09_01365
DNA replication proteins [BR:
nmes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H9L09_01365
DNA repair and recombination proteins [BR:
nmes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H9L09_01365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
UVR
Rv2179c-like
DEDDh_C
DUF7508
TMV_coat
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
QNN53173
UniProt:
A0A7G9RC48
LinkDB
All DBs
Position
311185..312978
Genome browser
AA seq
597 aa
AA seq
DB search
MSSAPVETADQRHQPHWESQRSFDELGRPLRDTTFCVVDLETTGGSAQGGSMITEIGAVK
VRGGEVLGEFQTLVNPHQAIPPFIAVLTGITDSMVATAPRIEQVLPQFLEFARGTVLVAH
NAPFDVGFLKHFAAQQQRPWPAFEVLDTAKLARRVVTRDETPNCKLGSLATLFGSATTPN
HRALSDARATVDVLHGLMERLGNLGVNTLEELATFSARVSTAQRRKRHLAEGLPHAPGVY
LFKDERGRVLYVGTSKDLRSRVRSYFTASETRSRMGEMVNLAASVQGIECTTPLEAEVRE
LRLIAEHKPRYNRRSRFPERVHWIKLTVEPWPRLSLVRQVLDDGAEYVGPFGSKRTAERS
LLALHEAFPIRQCGGRMAKKPSLTACALAQMGKCLSPCDGSVDAETYHAAVDDLRVALSS
RPDLVVATLTARMELLASSERFEDASSWRDRLAAFLRGTARTQRLQALTRCSEVVAARRE
DDRWAVHVIRHGRLAAAGVIPHGAHAGDWVLGLRASAETVVPGPGPTPAATAEESEKLLR
WLESDGVRLVHVEGDWTCPVGGATKHLKLHDAVRESRESLVPFEDRRGLRPEHQPVR
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgcaccggtggagaccgccgaccagcggcaccaaccccactgggagagccag
cgaagcttcgacgagctgggccgcccgctccgcgacaccaccttctgcgtggtggacctg
gagaccaccggcggatccgctcagggcggttcgatgatcaccgagatcggcgcggtcaag
gtgcgcggcggagaggtgctcggtgagttccagaccctggtgaacccgcaccaggcgatc
ccgcccttcatcgcggtgctcacggggatcaccgactccatggtggcgaccgccccccgg
atcgagcaggtcctcccccagttcctggagttcgcccggggcaccgtgctggtggcgcac
aacgctccgttcgacgtagggttcctcaaacatttcgcggcacagcagcaacgcccctgg
ccggccttcgaggtcctcgacaccgccaagctggcccgtcgggtcgtgacccgcgacgag
acgccgaactgcaagctcggctccctcgccaccctgttcggcagcgccaccacgcccaac
caccgcgcgttgtcggatgcgcgcgccacggtggatgtgctgcacggactgatggagcgg
ctggggaacctcggcgtcaacacgctcgaggagctggcgaccttctcggcccgagtcagc
acggcccagcgacgcaagcgccacctggccgaggggctgccgcatgccccgggcgtgtac
ctgtttaaggacgaacgaggccgggtgctctatgtcggcacctctaaggacttgcgctcc
cgtgtccgcagctacttcaccgcctcggagactcgctcccgcatgggggagatggtcaac
ctggccgcctctgtccagggaatcgagtgcacgacgccactcgaggccgaggtccgggag
ctccgcctgatcgccgagcacaagccccgctacaaccgccgctcgaggttccccgagcgg
gtccactggatcaagctgaccgtagagccgtggccccggctgtcgttggtccggcaggtc
ctcgacgacggcgccgagtacgtcggaccgttcggctccaagcggaccgccgaacgatcg
ttgctggcgctgcacgaggcgttcccgatccgccagtgcggcgggaggatggcgaagaag
ccgtcgctcaccgcctgcgctcttgcgcagatgggcaagtgcctctctccctgcgacggc
agcgtcgacgcggagacctatcacgcagccgtcgacgacctgcgggtcgcactgtccagc
cgacccgacctcgtggtggcgacgctgaccgcccggatggagcttctcgcctcgtccgag
cggttcgaggacgcctcgtcctggcgggaccggctcgccgcattcctccgcggcaccgcc
cgaacccagcgcctccaggccctcacccgctgctcggaggtggtcgcggcccgacgcgag
gacgaccggtgggcggtccatgtcatccggcacggtcggctggccgccgcgggcgtgatc
ccccacggtgctcacgccggcgactgggtcctgggccttcgggcatccgccgagacggtc
gtcccaggacccggccccacaccggcggcgacggccgaggagagcgagaagctcctcagg
tggctcgagtccgacggcgtccgcctcgtccatgtcgagggcgactggacctgccccgtg
ggtggtgcgaccaagcacctcaagctccacgacgccgtgcgcgagtcgcgcgagagcctc
gtgccgttcgaggatcgccgcgggctgcggcccgagcaccaaccggtccgatag
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