Nocardioides mesophilus: H9L09_03245
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Entry
H9L09_03245 CDS
T07004
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
nmes
Nocardioides mesophilus
Brite
KEGG Orthology (KO) [BR:
nmes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmes03021
]
H9L09_03245
Transcription machinery [BR:
nmes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H9L09_03245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
HTH_23
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
QNN53475
UniProt:
A0A7G9RD00
LinkDB
All DBs
Position
689283..690128
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AA seq
281 aa
AA seq
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MSRTNAATWPAALEHESRTRVPVGPVTTEGAETRGQISTRLLTQAAGESDPLERKRLQDE
VVVMHMGLARATAARYRGRGIAEEDLEQAAAMALLKAARNFDPTRGVEFLSYAVVTMTGE
VKRQFRDFGWMVRPPRAIQRLQAEVSRAEGELTHQLGRSPKVREVAEHLGVPEDDVLEAL
SADGCYTPTSLDLPVGAEGNGVLGDTLSQEDGALAEAEARVMLLPAVRALPERDRTVLYL
RFFKQQSQSQIAAQIDVTQMQVSRILSRVLDRLHGELSELT
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagccggacgaacgcagcgacgtggcccgctgccctcgagcacgagtcgcgcacacgc
gtccccgtcggccccgtcaccaccgagggggcagagacccgcggccagatcagcacccgg
ctgctcacccaggcggccggcgagagcgacccgctggagcgcaagcgtctccaggacgag
gtcgtggtcatgcacatggggctcgcccgagcgactgccgctcgctaccgcggccggggg
atcgccgaggaggacctcgagcaggccgccgcgatggcgctgctcaaggcggcgcgtaac
ttcgacccgacccggggcgtggagttcctcagctacgccgtggtcaccatgaccggggag
gtcaagcgccagttccgtgacttcgggtggatggtgcgtccgccacgggcgatccagcgg
ctgcaggccgaggtcagccgggccgagggcgagctcacccaccagctgggccgctccccc
aaggtccgggaggtcgccgagcacctgggcgtcccggaggacgacgtgctggaggcgctg
tccgccgacggctgctacacgcccacctccttggacctgcccgtgggcgccgagggcaac
ggggtcctcggcgacaccctgagccaggaggacggcgcgctcgccgaggcggaggcccgc
gtgatgctgctgcccgcggtgcgggcgctgccggagcgggaccgcacggtgctgtacctg
cgcttcttcaagcagcagagccagtcgcagatcgcggcccagatcgacgtgacccagatg
caggtctcccgcatcctgtcccgcgtgctggaccggctccacggcgagctgagcgagctc
acctag
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