Nocardioides mesophilus: H9L09_03970
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Entry
H9L09_03970 CDS
T07004
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
nmes
Nocardioides mesophilus
Pathway
nmes03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nmes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
H9L09_03970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmes03400
]
H9L09_03970
DNA repair and recombination proteins [BR:
nmes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
H9L09_03970
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
QNN53592
UniProt:
A0A7G9RDB7
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All DBs
Position
831056..832045
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AA seq
329 aa
AA seq
DB search
MRAIWKGAVSFGLVSVPVKLYAATESHDISFRQVHAKDGGRIKYQRVCSIDGEEVAYADI
AKGYETDDGQMVILSEDDFAELPASSSREISVEKFVPREQIEPMWLEKSYYLEPDKAAAK
PYALLREALKEADRVAVVTVSLRSRMTTAVLRVRDDVIVMQTMMWPDEIRQPDFGGLDAA
DMDVKPQELKMAKMLVETLAGDYDPSEYDDDYQEALEALVRAKLEGGEVQHLEQPKPTGG
EVVDLLAALQKSVAAAKSSRGEEAAEATGSGEEAEAEEPEEKPARKSPARKTAAKAPAKK
TAAKKAPAKKAAQSTSKKPAAKKTARKAS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcgatctggaagggcgccgtgtcgttcgggctggtgagcgtgcccgtgaagctg
tacgccgccaccgagagccatgacatctcgttccggcaggtgcacgccaaggacggcggc
cggatcaagtaccagcgggtctgcagcatcgacggcgaggaggtcgcctacgccgacatc
gccaagggctacgagaccgacgacggccagatggtgatcctcagcgaggacgacttcgcc
gagctgccggccagcagcagccgcgagatctccgtggagaagttcgtgccccgcgagcag
atcgagccgatgtggctggagaagtcctactacctcgagccggacaaggccgccgccaag
ccctacgcgctgctccgcgaggcgctcaaggaggccgaccgggtggcggtggtgacggtg
tcgctgcgctcccggatgaccaccgcggtgctgcgggtgcgcgacgacgtgatcgtcatg
cagacgatgatgtggcccgacgagatccgccagcctgacttcggcggcctcgacgcggcc
gacatggacgtcaagccgcaagagctgaagatggccaagatgctcgtcgagacgctggcc
ggcgactacgacccctccgagtacgacgacgactaccaggaggcgctcgaggcgctggtc
cgggccaagctcgagggcggcgaggtgcagcacctcgagcagccgaagccgaccggcggc
gaggtggtcgacctgctcgccgcgctgcagaagtcggtggcggcggcgaagtcctcacgc
ggcgaggaggccgccgaggcgaccgggtcgggcgaggaggccgaggccgaggagccggag
gagaagccggcccggaagagcccggccaggaagaccgccgccaaggcccccgcgaagaag
acggccgccaagaaggcaccggcgaagaaggccgcgcagtccacctcgaagaagccggcg
gcgaagaagaccgcgcgcaaggccagctga
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